G149194


Basic Information

Item Value
gene id G149194
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 35729890 ~ 36017601 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU201745
GCTGATCTTCTGATTAATCGTTGTGACTTATGTGTTCACTACAATGTCTTTTTGTTCCAATATATACCTGATGATGTTTGTATTCCGACCGCAGAAAAACTTGTCAAACATTTAGAGTTCGAACACAAACACTAAAGAGAACAAGAAGATCTGATTAAATAAATCTgtcaaatatgtttaaaatagtttttttgtgttcagAGTTCCCAGCAGAACCAGAAGTATTCTATAAAAAAACCCTGCAAAACTGCTCAGGAAACCCTGTTCTTAGCATGAAGCATGCACAGAGTACTTGACCTGGCCTCAACTTCAGTCCAACTACAATTTCAAAGTTGCGCCACCAGACATTTTGCATTGAGACCAACTTATCACCAGAAACTTAATATAGTGAGTTGAAGTAACTACTTTAACATAGTTTACAATGCCATTACGTATTTTTTTCCAGTTTAATTCaaaatcaaagtaagatgaGCAATTTAAAGTTCTCCTTTTTACAGTGAACAAATCTGAACAGATGTTAAACCATATTCAGAGACGGAAAATACAAATAgtgaatataaaatgtaaaatatacatTATGAAATGAAAGGTACACAAAGTAAGAACAGATAATGTTAAactacaaataataaaacaagaaTATGTATaaagcagacaaaaacaaataatgggAATACATCTTTAACATATCATTCTCAACACAAGGCTCACATTCTCTCATTTGGAGCTTTTGACCAAATTCCACAGCCTTCTTCAGCTCTTAAACTTCCCCCTGAATCCAACCAGCTGTTTTAGGCATAGCCTAATTATTTTTAGGCTATACCTTAGATTTTGTCATCTcataggatttttgcttttagatgttttattacagaaagacTATGAATGAGTCTATGAATAAATCTATGAAACAATCTGTTAattatggatggaattatagcGAAAATAATTTGCTGGGGGACCCCCTGGAACCCCTGGCGGGGTCCCTGGACCACACTTTGAGAACCATTGCTGTAGACCACTAACGTTACTGACCTCAATCAAGCTGCTTCCCTCAGAATCAGCTGCCctgacatctctctctctcaatataTTCCAGTGTCCATCTGCTGAATGATATAACGGTACAATAACATTACCAGTGACACTATGAaatttagttttcagtgacaacatTCTGTGGGGACTGATATTGTTTTTAATACTATAGAGATAGCAGGCTATCTTAATGGCAAAGAATAGAGAGTTTCGGATAGCTAACTAGGTTTGTTCTTgtatttcattcattcactctAGCTAGACTATTGTTTACCATAGCCAACTAAAATATCTCTTTATCTTTACCTCGAGGAAACATAGCTCAAGTTAAgaaagtaaaagtcttaacaaTTCCACTCACACATTGTTTGCCCATGTTCAAAAAGCAcctcaaaacatttcttttcactAAGTGATTTGACCcataacccccctccccccctatTTGTTAAGCGACCTTGGGTAccttgaaaggcgctatataaatccaagttattattattattagtagtagtagtagtagtagcaagTTCAGGCCAAAGATTTGCAATGTGATGAATGCTGCAGCTACTTGCAACGCAGCtttctgaaagctgccagtttacaccaatgATACGAGACAAGACGGTGTATCGTCTTCATAGCCATTGACTCTTTGTAATTCTGTCTAACTTTTGACTTTCCGCCTTTTTGTAGCTGTatatattatttgttgtttCTAAATAGGAATTTGGaaaacgttagtgatagtgagatgcttgctacagttacatttcGAGTGAGGAATCGGTgaaaacgttttatttctcagATTTACTGCTTTGTTTTTTATGCCGCCTGGCGCTCTTCTCTCTTCAGTTACTTTCTACCTCACTCGTCCACATACCGTTACGTGCACGCAGGCGCTCGTTGAGCCTCCGTCTCTGCATTTTCCACCAGCTGACAGTTcgtgaaatataaataaaacattatttggGGGAGCCTAGGAACTGTTTTGGGTAGCTTCATCACCCCTAAAATAGGCTTTAACGACATCAATAGTGATATTAAATTCAACGCTTTTGTAATAattaaatattgtaaaacaatttttttttatctgggtTATTCCATGTTGCTTTCTTTCACATAAACATCAAAAATTAAGAACAAATACTCCTTTGTTGCAGCATTAGTTAAATAGCGCTAGCAGTTGAACCCTGAaatcaaaatattttattacagGAACAAAAGCTAATTTTGAGAATTAATCCCTTCAAAGGGAGGGCGCGTAATATGTAGTCGTGGCCAAGATAACATCCATGGTGTTCAGAAGATCAAGTTACTgctggtcagccttcaatgtggagagaagatcagaatataaaacacagctatcagggcatgaggaggaggcaggaggaaacagcttggctctgaaacatgttcactacgaggcagtgtgaatgcgctggtgtcTTTTAAGGTGACTACTCTGAGAAAAAGTTGACACACACTGTTGACAGCaatacggcttctctccagtgtgaataaGCTGGTGTCTTTTAAGGCTACTACTAAGAGAAAAGGTtttcccacattgatcacagctgtaaggtttatctccagtgtgaatgcgttgatggttTTTTAGTTGACTCTGTCGtatgaaagctgccccacattgatcacagctgtaaggtttatctccagtgtgaatgcgttgatgggTTTTTAGGTTACcctgttgtgtgaaagctgccccacattgatcacagctgtatggcctctctccagtgtgaatgcgttgatggttTTTTAGGACACTGTGTCGtatgaaagctgccccacattgatcacagctatATGgcctctctccagtgtgaatgcgttgatggttTTTTAGGTCATTCTGTCGtatgaaagctgccccacattgatcacagctgtgtagATTCTTTCCAGTGTGAAGGCGTTGATGGTTTTTTAGGTTATAATgtagtgtgaaagctgccccacattgatcacagctgtgaagattctctccagtgtgaactctctgatgaatcttaaaatatgtagatgttgtgaaggatttgtcacagtgctgacagtggtgacgtttgggtccctctc
>TU201746
AGGCCAAAGATTTGCGATGTGATGAATGCTGCAGCTACTTGCAACGCAgcgttctgaaagctgccagtttacaccaatgATACGAGAcaagacggtgtatcatctccatagccaTTGACTCTTTGTAATTCTGTCTAACTTTTGACTTTCCGCCTTTTTGTTGCTGGatatattatttgttgtttctaaatatgaatgtggataacgttagtgatagtgagatgcttgctacagttacatttcGAGTGAGGAATCGGTgaaaacgttttatttctcagATTTACTGCTTTGTTTTTTATGCCGCCTGGCGCTcttctctcttcagtcactttCTACCTCACTCGTCCACATACCGTTACGTGCACGCAGGCGCTCATTGAGCCTCCGTCTCTGCATGATCCACCAGCTGACAGTTcgtgaaatataaataaaacatatttgggGGAGCTTAAGAACTTTTTTGGGTAGCTTCATCACCCCTAAAATAGGCTTTAACGACATCAATAGTGATATTAAATTAAACGCTTTTGTAATAATTAAatattgtaaaactaattatttttatctgtgttattccatgttgctttctttcacatgaacatccaaaagcagtacaaaaatatttttctttgagtCTTTAAGATCAGTTCTTCATCTCAAAATGGCAGTGGCACAGATGCagtttaaacacattaactgtTCGTTATTTTAAGCAGCAGACATGCTTCTCAGTTATGAAgaatttcttattttcttcgTCTTAAGGGACAAAGTTGAACCCTGAaatcaaaatattttattacagGAACAAAAGCTAATTTTGAGAATTAATCCCTTTAAAAGGGAGGGCGCGTAATATGTAGTCGTAGCAAAGATAACATGCATGCTGTTCAGAAGATAAAGTTACTGCTGGTCAGCCTTATAGAATATAACACAGCTAtcagggcatgaggaggaggcaggaggaaacagcttggctctgAAACATGTTCACTACGAGGCAGTGTGAATGAGCTGGTGTCTTTTAAGGTGACTACTCTGAGAAAAAGTTGACACACACTGTTCACAGCaatacggcttctctccagtgtgaataaGCTGGTGTCTTTTAAGGCTACTTCTaagagaaaaagttttcccacattgatcacagctgtattgtttatctccagtgtgaatgcgttgatggttTTTTAGGTCACcctgttgtgtgaaagctgccccacattgatcacagctgtatggcctctctccagtgtgaatgcgttgatggttTTTTAGGTTACcctgttgtgtgaaagctgccccacattgatcacagctgtatggcctctctccagtgtgaatgcgttgatggttTTTTAGGACACTGTGTCGtatgaaagctgccccacattgatcacagctatATGgcctctctccagtgtgaatgcgttgatggttTTTTAGGTCATTCTGTCGtatgaaagctgccccacattgatcacagctgtgtagATTCTTTCCAGTGTGAAGGCGTTGATGGTTTTTTAGGTTATAATgtagtgtgaaagctgccccacattgatcacagctgtgaagattctctccagtgtgaactctctgatgaatcttaaaatatgtagatgttgtgaaggatttgtcacagtgctgacagtggtgacgtttgggtccctctc

Function

GO: NA

KEGG:

id description
ko03030 DNA replication
ko03460 Fanconi anemia pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU201745 True 3153 lncRNA 0.38 3 35729890 36017601
TU201746 False 1679 lncRNA 0.41 2 35731474 36017601

Neighbor

gene id symbol gene type direction distance location
LOC120573495 NA coding upstream 54246 35653002 ~ 35675644 (+)
LOC120573494 NA coding upstream 155622 35560450 ~ 35574268 (+)
LOC120572927 NA coding upstream 254232 35467836 ~ 35475658 (+)
LOC120572777 LOC104964776 coding upstream 400670 35324383 ~ 35329220 (+)
LOC120572797 LOC101882356 coding upstream 462070 35263468 ~ 35267820 (+)
LOC120572637 LOC103389327,LOC101480196 coding downstream 353278 36370879 ~ 36401016 (+)
LOC120572853 NA coding downstream 403234 36420835 ~ 36427296 (+)
LOC120572851 NA coding downstream 426898 36444499 ~ 36453193 (+)
LOC120572753 NA coding downstream 619896 36637497 ~ 36646194 (+)
LOC120572900 LOC107396480 coding downstream 633835 36651436 ~ 36657906 (+)
LOC120572998 NA non-coding upstream 50351 35678806 ~ 35679539 (+)
G149184 NA non-coding upstream 177948 35493204 ~ 35551942 (+)
G149180 NA non-coding upstream 269956 35459376 ~ 35459934 (+)
LOC120573010 NA non-coding upstream 509215 35168089 ~ 35220675 (+)
G149129 NA non-coding upstream 567266 35155187 ~ 35162624 (+)
LOC120572973 NA non-coding downstream 136038 36153639 ~ 36159800 (+)
G149256 NA non-coding downstream 154056 36171657 ~ 36213688 (+)
G149258 NA non-coding downstream 159804 36177405 ~ 36182828 (+)
LOC120573000 NA non-coding downstream 206581 36224182 ~ 36231995 (+)
LOC120572955 NA non-coding downstream 281759 36299360 ~ 36305247 (+)
G149172 NA other upstream 300847 35426249 ~ 35429043 (+)
LOC120572790 NA other upstream 414471 35262152 ~ 35315419 (+)
G149095 NA other upstream 587404 35136144 ~ 35142486 (+)
G149096 NA other upstream 601687 35122722 ~ 35128203 (+)
LOC120572831 NA other upstream 641795 35073121 ~ 35088095 (+)
LOC120572849 NA other downstream 99697 36117298 ~ 36130103 (+)
LOC120572889 NA other downstream 322030 36339631 ~ 36343826 (+)
LOC120572806 NA other downstream 446860 36464461 ~ 36476242 (+)
G149584 NA other downstream 919805 36937406 ~ 36938142 (+)
G149657 NA other downstream 1333474 37351075 ~ 37351844 (+)

Expression


Co-expression Network