LOC120572889


Basic Information

Item Value
gene id LOC120572889
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 36339631 ~ 36343826 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU201846
GGAGGACACATCTCTACTCTGGCTGCTCTTTCTGACCTCACTGCTGAGCTGCCCAACAAACCAAGtctctctgactgtgagacccagcagctctcagatgtttaaaggacagtctgtctctctgagctgtgaggaggacgacagctctgctggatggactctgaggaggaacacaACCAGAGAAACCAGGACTCAGTGTGGAGATGGCTGGGGAAGACCTGCTGGTTCTTCCTGTAACATCAGCTACATGGCCCCATCGGACAGTGGAGTttactggtgtgagtccagagagggagcaaccagtaacagcatcaccatcactgtcactggtggaccagtgatcctgcagagtcctgtcctccctgtgatggagggagaagacctcactctgacctgtaaaacaaaga
>TU201847
GGAGGACACATCTCTACTCTGGCTGCTCTTTCTGACCTCACTGCTGAGCTGCCCAACAAACCAAGtctctctgactgtgagacccagcagctctcagatgtttaaaggacagtctgtctctctgagctgtgaggaggacgacagctctgctggatggactctgaggaggaacacaACCAGAGAAACCAGGACTCAGTGTGGAGATGGCTGGGGAAGACCTGCTGGTTCTTCCTGTAACATCAGCTACATGGCCCCATCGGACAGTGGAGTttactggtgtgagtccagagagggagcaaccagtaacagcatcaccatcactgtcactggtaagatcagactgtggagtcagtattgatgaagctgtgtgtgaatggatgacatgc
>XM_039822404.1
TCACCAACAGTTAGGATGGAGGACACATCTCTACTCTGGCTGCTCTTTCTGACCTCACTGCTGAGCTGCCCAACAAACCAAGtctctctgactgtgagacccagcagctctcagatgtttaaaggacagtctgtctctctgagctgtgaggaggacgacagctctgctggatggactctgaggaggaacacaACCAGAGAAACCAGGACTCAGTGTGGAGATGGCTGGGGAAGACCTGCTGGTTCTTCCTGTAACATCAGCTACATGGCCCCATCGGACAGTGGAGTttactggtgtgagtccagagagggagcaaccagtaacagcatcaccatcactgtcactggtggaccagtgatcctgcagagtcctgtcctccctgtgatggagggagaagacctcactctgacctgtaaaacaaagatgtcctccaacctcccagctggtttctataaagatggctccttcatcaggactgagcctgcagctcacatgaccatccaccatgtttccaggtctgatgaaggTCTCTACAAGTGCAACATCAGCAGTCTTGGAGAGTctccacccagctgggtctctgtcacaggtgAGGAGGTTACCTTTGATTTCAGGAGTTCATTCATCCAGATATTCACCTGACAGCTGATTCTCTCTACAGAGAAACCAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU201846 False 407 TUCP 0.53 4 36339648 36343578
TU201847 False 386 TUCP 0.52 3 36339648 36343478
XM_039822404.1 True 672 mRNA 0.51 4 36339631 36343826

Neighbor

gene id symbol gene type direction distance location
LOC120572867 NA coding upstream 519184 35815893 ~ 35820447 (+)
LOC120572944 NA coding upstream 537698 35799725 ~ 35801933 (+)
LOC120573495 NA coding upstream 663987 35653002 ~ 35675644 (+)
LOC120573494 NA coding upstream 765363 35560450 ~ 35574268 (+)
LOC120572927 NA coding upstream 863973 35467836 ~ 35475658 (+)
LOC120572637 LOC103389327,LOC101480196 coding downstream 27053 36370879 ~ 36401016 (+)
LOC120572853 NA coding downstream 77009 36420835 ~ 36427296 (+)
LOC120572851 NA coding downstream 100673 36444499 ~ 36453193 (+)
LOC120572753 NA coding downstream 293671 36637497 ~ 36646194 (+)
LOC120572900 LOC107396480 coding downstream 307610 36651436 ~ 36657906 (+)
G149212 NA non-coding upstream 20895 35774884 ~ 36318736 (+)
LOC120572955 NA non-coding upstream 34384 36299360 ~ 36305247 (+)
LOC120573000 NA non-coding upstream 107636 36224182 ~ 36231995 (+)
G149229 NA non-coding upstream 109022 35793631 ~ 36230609 (+)
G149256 NA non-coding upstream 125943 36171657 ~ 36213688 (+)
G149216 NA non-coding downstream 24574 36368400 ~ 36376886 (+)
G149274 NA non-coding downstream 42790 36386616 ~ 36388121 (+)
G149275 NA non-coding downstream 44427 36388253 ~ 36388706 (+)
LOC120573024 NA non-coding downstream 137260 36481086 ~ 36481441 (+)
G149489 NA non-coding downstream 149227 36493053 ~ 36531194 (+)
G149187 NA other upstream 77259 35788119 ~ 36262372 (+)
LOC120572849 NA other upstream 209528 36117298 ~ 36130103 (+)
G149172 NA other upstream 910588 35426249 ~ 35429043 (+)
LOC120572790 NA other upstream 1024212 35262152 ~ 35315419 (+)
G149095 NA other upstream 1197145 35136144 ~ 35142486 (+)
LOC120572806 NA other downstream 120635 36464461 ~ 36476242 (+)
G149584 NA other downstream 593580 36937406 ~ 36938142 (+)
G149657 NA other downstream 1007249 37351075 ~ 37351844 (+)
G149671 slc25a11 other downstream 1224087 37567913 ~ 37570708 (+)
G149843 LOC107105148 other downstream 1333169 37676995 ~ 37681109 (+)

Expression


Co-expression Network