LOC120572806


Basic Information

Item Value
gene id LOC120572806
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 36464461 ~ 36476242 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU201864
GTTTACTTGGAAGAGAACCGAGGCTTTTACACCATCCCAAACCAACCGGACTATCAGACCCAACGCTCCAGGAATCCAGAGTGAGTCCAGCAGCCACAGAGGAGAGCTGCTGGAtctcagagacaaagagaggaatggaggaccAGACCTCCGACCAGAACCCGGAGCAGCGGAGCAACAAGGTCCCCAGAAGACAAGCAGC
>XM_039822259.1
TAGTCGTGTTGTTGCTGTCGAGCCCATTAGTGAGTTTTGAGACGGCGGAGCTCCAGGtaacctcacacacactcagctaaaCACTAGCTAACTGCCAAATGCTAACGGAGCTGAGCTAAAACTAGCAGGTTACTTTGCGACGAGTAGCctccaagatgctaacggcttttTGAGCTAACGCACAGTCGTAAAGATGCTAAGTTTACTTGGAAGAGAACCGAGGCTTTTACACCATCCCAAACCAACCGGACTATCAGACCCAACGCTCCAGGAATCCAGAGTGAGTCCAGCAGCCACAGAGGAGAGCTGCTGGAtctcagagacaaagagaggaatggaggaccAGACCTCCGACCAGAACCCGGAGCAGCGGAGCAACAAGGTCCCCAGAAGACAAGCAGCAGGCTCGGACTCTGATACCACCgatgttcagaaacggagaggaagagagacactCAAACGTCACAACTGTCagcactgtgacaaatccttcacGAGATCAACGTctttaaagattcatcagagagttcacactggagagaatctgcacagctgtgatcaatgtggggcagctttcacacgacAGAGTTCCCTAAAaagacatcaacgcattcacactggagagaagccgtacagctgtgatcaatgtggggctgCTTTCTCACAACAGACTGACCTAAAaagacatcaacgcattcacactggagagaagccgtacagctgtgatcagtgtggggcagctttcacacaccAGGGTCACCTTACACGTcaccaacgcattcacactggagacaaACCTCACAGCTGTGATATATGTGAGAAAGCTTTCACCACTAAAAGAGATGTTGAAGACCACCGACTTGTTCACACTGGAGTGAAACCGTACTGGTGTGATCGATGTGGGAAGACTTTTTGTAATAGTGGTAAACTTAAAGTCCACCAGcgcgttcacactggagagaagccatattggtgtgaacaatgtgggaaaacattttatagtaGTAGTCACCTTAAAGtccaccagcgcattcacactggagagaagccatattggtgtgaacaatgtgggaaaacattTTCTAGTAGTAGTCACCTTAAAGtccaccagcgcattcacactggagagaagccatattggtgtgaacaatgtgggaaaacgttTTCTGATAGTGGTAACCTTAAAAgacaccagcgcattcacactgcctcGTTGTGAACATGTTTCAGAGCCAATCTGTTTCCTCCTGCCACCTCCTCATACCCTGATAGCTATGTTGTTATATTGtgatcttctctccacattgaaggctgaccagcAGTAACCTCTATCTtctgaacagcatggatgttatCGTGGCTACGACTACATATTACGCTCCCTCCCTTTGAAGAGATAGTCCTGTTAGAAGTCTGTCAGAGGCTGTTTCTCCTGATTCAGTTGGTTTCAATGTGTTCCTATTATTGATTTTGTCTGTCTCATAcatagggctagatttatcaagccgtttgcgtctgtttccaggcgctaattggtcgcaaagacgggcgtaaccga
>XM_039822260.1
CGGCGGAATAGTCGTGTTGTTGCTGTCGAGCCCATTAGTGAGTTTTGAGACGGCGGAGCTCCAGTTTACTTGGAAGAGAACCGAGGCTTTTACACCATCCCAAACCAACCGGACTATCAGACCCAACGCTCCAGGAATCCAGAGTGAGTCCAGCAGCCACAGAGGAGAGCTGCTGGAtctcagagacaaagagaggaatggaggaccAGACCTCCGACCAGAACCCGGAGCAGCGGAGCAACAAGGTCCCCAGAAGACAAGCAGCAGGCTCGGACTCTGATACCACCgatgttcagaaacggagaggaagagagacactCAAACGTCACAACTGTCagcactgtgacaaatccttcacGAGATCAACGTctttaaagattcatcagagagttcacactggagagaatctgcacagctgtgatcaatgtggggcagctttcacacgacAGAGTTCCCTAAAaagacatcaacgcattcacactggagagaagccgtacagctgtgatcaatgtggggctgCTTTCTCACAACAGACTGACCTAAAaagacatcaacgcattcacactggagagaagccgtacagctgtgatcagtgtggggcagctttcacacaccAGGGTCACCTTACACGTcaccaacgcattcacactggagacaaACCTCACAGCTGTGATATATGTGAGAAAGCTTTCACCACTAAAAGAGATGTTGAAGACCACCGACTTGTTCACACTGGAGTGAAACCGTACTGGTGTGATCGATGTGGGAAGACTTTTTGTAATAGTGGTAAACTTAAAGTCCACCAGcgcgttcacactggagagaagccatattggtgtgaacaatgtgggaaaacattttatagtaGTAGTCACCTTAAAGtccaccagcgcattcacactggagagaagccatattggtgtgaacaatgtgggaaaacattTTCTAGTAGTAGTCACCTTAAAGtccaccagcgcattcacactggagagaagccatattggtgtgaacaatgtgggaaaacgttTTCTGATAGTGGTAACCTTAAAAgacaccagcgcattcacactgcctcGTTGTGAACATGTTTCAGAGCCAATCTGTTTCCTCCTGCCACCTCCTCATACCCTGATAGCTATGTTGTTATATTGtgatcttctctccacattgaaggctgaccagcAGTAACCTCTATCTtctgaacagcatggatgttatCGTGGCTACGACTACATATTACGCTCCCTCCCTTTGAAGAGATAGTCCTGTTAGAAGTCTGTCAGAGGCTGTTTCTCCTGATTCAGTTGGTTTCAATGTGTTCCTATTATTGATTTTGTCTGTCTCATAcatagggctagatttatcaagccgtttgcgtctgtttccaggcgctaattggtcgcaaagacgggcgtaaccga
>XM_039822261.1
CGTTGCTTCACTGTGATCTCGGGCTGGCGGCGGAATAGTCGTGTTGTTGCTGTCGAGCCCATTAGTGAGTTTTGAGACGGCGGAGCTCCAGAATCCAGAGTGAGTCCAGCAGCCACAGAGGAGAGCTGCTGGAtctcagagacaaagagaggaatggaggaccAGACCTCCGACCAGAACCCGGAGCAGCGGAGCAACAAGGTCCCCAGAAGACAAGCAGCAGGCTCGGACTCTGATACCACCgatgttcagaaacggagaggaagagagacactCAAACGTCACAACTGTCagcactgtgacaaatccttcacGAGATCAACGTctttaaagattcatcagagagttcacactggagagaatctgcacagctgtgatcaatgtggggcagctttcacacgacAGAGTTCCCTAAAaagacatcaacgcattcacactggagagaagccgtacagctgtgatcaatgtggggctgCTTTCTCACAACAGACTGACCTAAAaagacatcaacgcattcacactggagagaagccgtacagctgtgatcagtgtggggcagctttcacacaccAGGGTCACCTTACACGTcaccaacgcattcacactggagacaaACCTCACAGCTGTGATATATGTGAGAAAGCTTTCACCACTAAAAGAGATGTTGAAGACCACCGACTTGTTCACACTGGAGTGAAACCGTACTGGTGTGATCGATGTGGGAAGACTTTTTGTAATAGTGGTAAACTTAAAGTCCACCAGcgcgttcacactggagagaagccatattggtgtgaacaatgtgggaaaacattttatagtaGTAGTCACCTTAAAGtccaccagcgcattcacactggagagaagccatattggtgtgaacaatgtgggaaaacattTTCTAGTAGTAGTCACCTTAAAGtccaccagcgcattcacactggagagaagccatattggtgtgaacaatgtgggaaaacgttTTCTGATAGTGGTAACCTTAAAAgacaccagcgcattcacactgcctcGTTGTGAACATGTTTCAGAGCCAATCTGTTTCCTCCTGCCACCTCCTCATACCCTGATAGCTATGTTGTTATATTGtgatcttctctccacattgaaggctgaccagcAGTAACCTCTATCTtctgaacagcatggatgttatCGTGGCTACGACTACATATTACGCTCCCTCCCTTTGAAGAGATAGTCCTGTTAGAAGTCTGTCAGAGGCTGTTTCTCCTGATTCAGTTGGTTTCAATGTGTTCCTATTATTGATTTTGTCTGTCTCATAcatagggctagatttatcaagccgtttgcgtctgtttccaggcgctaattggtcgcaaagacgggcgtaaccga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU201864 False 202 lncRNA 0.55 2 36465326 36467797
XM_039822259.1 True 1558 mRNA 0.47 4 36464496 36476242
XM_039822260.1 False 1421 mRNA 0.47 4 36464488 36476242
XM_039822261.1 False 1377 mRNA 0.47 3 36464461 36476242

Neighbor

gene id symbol gene type direction distance location
LOC120572851 NA coding upstream 11268 36444499 ~ 36453193 (+)
LOC120572853 NA coding upstream 37165 36420835 ~ 36427296 (+)
LOC120572637 LOC103389327,LOC101480196 coding upstream 63445 36370879 ~ 36401016 (+)
LOC120572867 NA coding upstream 644014 35815893 ~ 35820447 (+)
LOC120572944 NA coding upstream 662528 35799725 ~ 35801933 (+)
LOC120572753 NA coding downstream 161255 36637497 ~ 36646194 (+)
LOC120572900 LOC107396480 coding downstream 175194 36651436 ~ 36657906 (+)
LOC120572642 NA coding downstream 242244 36718486 ~ 36720358 (+)
LOC120573341 NA coding downstream 620670 37096912 ~ 37101599 (+)
LOC120572645 NA coding downstream 625334 37101576 ~ 37121087 (+)
G149275 NA non-coding upstream 75755 36388253 ~ 36388706 (+)
G149274 NA non-coding upstream 76340 36386616 ~ 36388121 (+)
G149216 NA non-coding upstream 87575 36368400 ~ 36376886 (+)
G149212 NA non-coding upstream 145725 35774884 ~ 36318736 (+)
LOC120572955 NA non-coding upstream 159214 36299360 ~ 36305247 (+)
LOC120573024 NA non-coding downstream 4844 36481086 ~ 36481441 (+)
G149489 NA non-coding downstream 16811 36493053 ~ 36531194 (+)
G149492 NA non-coding downstream 94393 36570635 ~ 36587482 (+)
G149524 NA non-coding downstream 167810 36644052 ~ 36688498 (+)
G149527 NA non-coding downstream 183944 36660186 ~ 36662049 (+)
LOC120572889 NA other upstream 120635 36339631 ~ 36343826 (+)
G149187 NA other upstream 202089 35788119 ~ 36262372 (+)
LOC120572849 NA other upstream 334358 36117298 ~ 36130103 (+)
G149172 NA other upstream 1035418 35426249 ~ 35429043 (+)
LOC120572790 NA other upstream 1149042 35262152 ~ 35315419 (+)
G149584 NA other downstream 461164 36937406 ~ 36938142 (+)
G149657 NA other downstream 874833 37351075 ~ 37351844 (+)
G149671 slc25a11 other downstream 1091671 37567913 ~ 37570708 (+)
G149843 LOC107105148 other downstream 1200753 37676995 ~ 37681109 (+)
G149853 NA other downstream 1266932 37743174 ~ 37851881 (+)

Expression


Co-expression Network