G149492


Basic Information

Item Value
gene id G149492
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 36570635 ~ 36587482 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU202179
CCGAGAAGGCCAAATACAACAGCTCAACAAAAATTGATAATGGAAACAGTTTGAAATGAGAGCAGCAACCCTGACAGAAAGAGCGTAATTgacatagatagatatagaaAGAAGACTTCACATCTGTCAGACCTATTTAAGTCTTCAGCATGCACCGTGTCATTTCATACAACAGTCTTCTGAGTACAGTATCAATACTCGACTCAAATGAAGCAGCTACTGTTTTATGGCAACAGACCACGCAATGCATCATGGgattgtagtttttctaaactTTTATTGAAATCCAGGGCAAAATACAACAAGGCAACAGTGGCATCAAGTGATGAAACTAGAAAACAGCAACACAAAataaatgggaaaaaaagactaaatGGAGAGCCTTTGGGATCACGTTGGAGCCTGCTTGAGATGCTCGAACACTATCACTGcagaactttgcaattttcTACAAGTCTGACATGTGTGaatttttttgtgaattccCGAGCATCATAAGCCCTTAAAAAATTTTATTCTATCTATCCTTTTAGATTCAAGCCAGCAATGCAGTGTAGTGTCAGCCTTTCAGCATCCAGCATTCACACAGCAATTTTTCAGAAATTGCAATTTCTAGTTTCCATGTTCCTTTACCCATTCAtttaacacaaataaaataacGTACAACATGGTAATAGCTAGGGTTGCacgcagtgttgtaatgtaagttaatgtactcaagtagaatttcacgtatctgtactttactttgttatttatatttccagAAACTTTTGCTTTTagtccactacatttcccctgAGCATCTTAATtactcgttactacaaaataaaatcaaaagtaATGTGTCACACTGGAAATAAAagcaggtttggcgaatcattgcTGCTAGATTGCAAGTTCATGCTCCATTCCTGTTGGTGATGTGATGTCTGTTTGTTgccaagcagcaaaaaaaacaacaacaacgaccGTAGGTCAAaactgaagaggaggaggacgcatAATGACATGGAAGCACCTGCTGCAGGCTCTGTTGCCATAGTAACAGATGATGAACACCCCGAcgacagtggtgatgaagataacattacacacctttggccataatccaaagtttttttttttacttttacttctaatacttaagtacatttaatatcagaaaattacttttgatctTTAGGGACTGTTTATTTAAGGGGctaccggaggagttttgggatctttagtcaaaatagacttgacccatccatccatcgtctgcttatccggtgtcgggtcgcggggggagaaGCTCCAGCAGcagaccccaaacttccctttcccgagccacattaaccagctctgaatgggggatcccgaggcgttcccaggccaggttggagatataatccctcgcCATTGACCTAAATTGCTTCTCAatttccgccgtagcgagtagtataaagaaATGGGGGATTGAGTAAGGGGGTAGGTTGGGGTGgcagatgggtaaaacacaggactttcacccggagAGCCGGGTTCGCGTGCGACGATTTTTGTGCCGTTTCAgccgtttttattttaataggccttacccaatgtttctttcctaaacccaaccatttattgtgttcctaagcgtgtttttgtcgttattttccgtgtttttgtcactgttttgttactaaagccatTCCCTGTGTTAGACGTGAAGACGTTGTTCTCGCTatagtacgtcgcgttctcgcgataacacgcaacgtggcgaggccatgtggtgggtatgtttacatcagctgtatacagcataggcatacacgtggatagctgaaaatgcgtacaaTAACATAGCCATTttgctttatgaaagtggcgtgtatatttacgcaaagtcatgatgccatgttgtgcACGGGCTTGGTTAGGGTCGGGCTTCATTTATTGGGCCCGACTTTCTAGTGGGAGGCAGGCGGCGCCTGGCTACAGCCGTGCGTAACAAGAAATGACAGCTTCATGTAGAGCCTATAGGTTTTTCCAGTGGACATTTAAAGCCACAGCTCCCCGCTTCAAAACAAACGCAAACGCACAGTTACCGGCAGTGTCTGGCCGCCCCGGACCACGCCACACACTATGCCGAGCGAGCTTTAAGAGTCATGGGGAAAGGGTCAGGCGTGGTGTATCATGGTGGTGGGGGATGGTGCGATTTTTGTTGGGTCATGCCATGAGTTTGAGCGTCTCAAGTCCCTCAAAAATGCTAATGTCCAGcaggaaaataataattatccTTTCAAAAACAATTAGGTTCCTCGCACATTTAGTAGCAGGGACCATTAATAACTAGAGACTATGTATGAggcagacaaaaacaacaatgggAACACATCtgtaataaattattaaaagtaaGTAATCATTAAAACAAACTGAATCAGGAGAAACAGCCTCTGACAGACTTAACAGGACCATCTCTTCAAAGGGAGGGAGCGTAATATGTAGTCACAGCCACAATAACATACATGCTGTTCAGAAGATGAAGTTACTgctggtcagccttcaatgtggagagaagCTCAGAATATAACAGAGTTATCAGGGTATGAGGAGGagacaggaggaaacagcttggctctgaaacatgttcacaacgaggcagtgtgaatgcgctggtgtcTTTTAAGGGTACTACtatcagaaaacattttcccacattgttcacaccaatatggcttctctccagtgtgaatgcgctggtggaCTTTAAGGTAACTACTATTAGAAaacgttttcccacattgttcacaccaatatggcttctctccagtgtgaatgcgctggtgtcTTTTAAGGTTACTACTATGAGAAAAAGTCTTCCCACATCGATCACACCAGTACGGTTTCACTCCAGTGTGAACAAGTCGGTGGTCTTCAACTTCTCTTTTAGTGGTGAAAGCTTTCTCACATATATCACAGCTGTGAGGTttgtctccagtgtgaatgcgttggtgACGTGTAAGGCTAGTCTGTTGTGTGAAAGCtaccccacattgatcacagatGTATGGCTTCTCTCCAGAGTGAATGAATTGATGTATTTTTAGGTGATGCCgtcgtgtgaaagctgccccacattgatcacagctgtacggcttctctccagtgtgaatgcgttgatgtcttTTTAGgGAACTCTGTTGTGAGAAAGCTGcgccacattgatcacagctgtctggcttctctccagtgtgaaggcgttgatgtgtttttaggtgactctgttgtgtgaaagctgccccacattgatcacagctgtgcagattctctccagtgtgaactctctgatgaatctttaaatacGTTGACgttgtgaaggatttgtcacagtgctGACAGTGGTGACGTTTGAGTCCTTCTGTCCC
>TU202184
GCAACAGTTAGCTTtctattttctgactttttattacatCATCAGCGTTTTTGCTTTTTGTCTGAAACAAACCtcaacagatttaaaaccaCATTCCGTCACAGAGAATACAAACAGTgaattcaaaatgtcaaacaaagaTTATTGAATGAAAAGTCCACAAAGGAAGAAAATAGAATAACTATGAAACAACAATAACTATGAGAGAGCACACAATTCAAAATGGCCAACTTCcagttgggcggagctaatgagaGTAAATTGGACAAATGTCCGTGATGATGAGAGGAATATTTGTACCAAATTGTGTGAATATTGGGGCATATATGTCCAAATTAGTCTCACAATGCTCAGGGGTTTTGATTTGTGCGCCAACCATCTTGGAGTTTTCGAGTGTATAAAGGGCGAGCCCAAATGTGATATCAAATCAATATAATTGCTAAATCTAACAAGCCTGCAACATGTTCTTAAATTATCTATCCTTTTAGAATCAAGCCAGCAATGCAATGTAGCGTCAGCCTTTCAGCATCCAGCATTCACACCGCAATTTTTCAGAAATTGCAGTTTCTAGTTTCCATATGTTCCTTTACCCATGAATTTAACACAACGAACATAACACCATACAACATGGTAATAGCTAGGGTTGAAAATATGCAAAATGCCATGAGTTTCAGCATCCCAAGCCCCTTAAAAATGCTAATGCACAgcaagaaaataataattatccTTTCGCAAACAATTAGGTTCCTCGCACGTTTAGTAGCAGGGACTATTGATAACTAGAGACTATGTGTGAggcagacaaaaacaacaatgggAACACATCTGTAACAAAGCATTATCAGTAAGTAATCATTGAAACAAACTGAATCAGCAGAAACTGCCTCTGACAGACTTCTAACAGGACTATCTCTTCAAAGGGAGGGAGCGTAATATGTAGTCGTAGCCACAATAACATACATGCTGTTAAGAAGATAAAGTTACTGCTGGTCAGCAttcaatgtggagagaagatcagaatATAACAACAGAGTTATCAGGGTATGAGGAGGAAACTGGAGGAAATAGATTGGCTCTGAAACATGTTCACAACgaggcagtgtgaatgcgctggtgtcTTTTAAGGCTACTACTATTAGAAaacgttttcccacattgttcacaccaatatggcttttctccagtgtgaatgcgctggtggaCTTTAAGGTGACTACTATTAGAAAACGTTTTCCCAcattcacaccagtacggcttctctccagtgtgaatgcgctggtggaCTTTAAGGTGACCACTATTAGAAaacgttttcccacattgttcacaccagtacggcttctctccagtgtgaatgcgctggtgacATTTAAGGTGACTACTCTGAGAAAAAGTCTTCCCACATCGATCACACCAGTACGGTTTCACTCCAGTGTGAACAAGTCGGTGGATTTCAACATCTCTTTTAGTGGTGAAAGCTTTCTCACATATATCACAGCTGTGAGGTttgtctccagtgtgaatgcgttggtgAGATGTAAGGTTACTCTgcagtgtgaaagctgccccacactGATCACAGTTGTacagcttctctccagtgtgaatgcgttgatgtgtttttaggtgactctgttgtgtgaaagctgccccacattgatcacagctgtgcagattctctccagtgtgaactctctgatgaatctttaaatacGTTGACgttgtgaaggatttgtcacagtgctGACAGTGGTGACGTTTGAGTCCTTCTGTCCC

Function

GO: NA

KEGG:

id description
ko03460 Fanconi anemia pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU202179 True 3404 lncRNA 0.43 2 36570635 36587482
TU202184 False 1776 lncRNA 0.40 2 36585539 36587482

Neighbor

gene id symbol gene type direction distance location
LOC120572851 NA coding upstream 117442 36444499 ~ 36453193 (+)
LOC120572853 NA coding upstream 143339 36420835 ~ 36427296 (+)
LOC120572637 LOC103389327,LOC101480196 coding upstream 169619 36370879 ~ 36401016 (+)
LOC120572867 NA coding upstream 750188 35815893 ~ 35820447 (+)
LOC120572944 NA coding upstream 768702 35799725 ~ 35801933 (+)
LOC120572753 NA coding downstream 50015 36637497 ~ 36646194 (+)
LOC120572900 LOC107396480 coding downstream 63954 36651436 ~ 36657906 (+)
LOC120572642 NA coding downstream 131004 36718486 ~ 36720358 (+)
LOC120573341 NA coding downstream 509430 37096912 ~ 37101599 (+)
LOC120572645 NA coding downstream 514094 37101576 ~ 37121087 (+)
G149489 NA non-coding upstream 39441 36493053 ~ 36531194 (+)
LOC120573024 NA non-coding upstream 89194 36481086 ~ 36481441 (+)
G149275 NA non-coding upstream 181929 36388253 ~ 36388706 (+)
G149274 NA non-coding upstream 182514 36386616 ~ 36388121 (+)
G149216 NA non-coding upstream 193749 36368400 ~ 36376886 (+)
G149524 NA non-coding downstream 56570 36644052 ~ 36688498 (+)
G149527 NA non-coding downstream 72704 36660186 ~ 36662049 (+)
G149535 NA non-coding downstream 89806 36677288 ~ 36702681 (+)
G149546 NA non-coding downstream 149551 36737033 ~ 36795336 (+)
G149544 NA non-coding downstream 173465 36760947 ~ 36767272 (+)
LOC120572806 NA other upstream 94393 36464461 ~ 36476242 (+)
LOC120572889 NA other upstream 226809 36339631 ~ 36343826 (+)
G149187 NA other upstream 308263 35788119 ~ 36262372 (+)
LOC120572849 NA other upstream 440532 36117298 ~ 36130103 (+)
G149172 NA other upstream 1141592 35426249 ~ 35429043 (+)
G149584 NA other downstream 349924 36937406 ~ 36938142 (+)
G149657 NA other downstream 763593 37351075 ~ 37351844 (+)
G149671 slc25a11 other downstream 980431 37567913 ~ 37570708 (+)
G149843 LOC107105148 other downstream 1089513 37676995 ~ 37681109 (+)
G149853 NA other downstream 1155692 37743174 ~ 37851881 (+)

Expression


Co-expression Network