G149853


Basic Information

Item Value
gene id G149853
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 37743174 ~ 37851881 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU202698
CATGCATGCTGGGAGCTGGTCGTAGCATGCCTTCAAAGTCGGTAAGCTGTTTCAAAAGAATGGGCGTGGTTATTACCCCGCCCCTCTGTTTATAAGGATAGGAAAAGAAAGAACTTTCTCCACCATCATCAGAACCCTTCCTACCTATAGTCATACAACATAGGCAGCAGAAGAAGAGAGCAGTGAGTTGCCTGGGAGAGCAGAGACATGAGGACTGAACTACAGAGTGGCTGTTTCCTGAgagctgtgtgtctgctgctggtgacctttgaccccggcGCTGCTAAACGCTGTCCGACATGTGACCCAGGTTACTTTGTGATAAAGAACTGTTCAGGGAATGAGGGAATTCAGTGTAGCCGCTGCACAGACTGCtcagCGTCTCATAAGGAAACTCTGGTTAATTGTTCCACGTTTGCCGACTCGTTGTGTGGAAACAAGAGCCCACCTACGACGGCCCAACCTGCAGGCGGAGATCATACGGCAGTTCCTCAGGACGTCACAACCAACCCCCGCCCCCTGGAAATTACCTCTGATAGTAGAGTCTGCTGCTGAAGTCTGGATCCCCATAACTGTGACAGTATCGTCTCTGTTGCTGGTTCTGCTGGCCGTGTCTCTCGCCATGCTGTCCCGCTGGAAACACCAACCCAAGAAACCAGACGGTCCTGATCAGGTGTGACTGAAGATGAACAGATCAGGGGttgtcaaacttttttcaataatgtacctcctttgaattgtgtttttaacatatttttaaaggaGCATTTTGCTAAAAGttcacataccccctgcagtactccaaagtacccccagGGGTAcagtaccccctgcagtactccagcATACCCCCAGGGGTACGGTACCCCCTGCAATACTCCAGCGTACCCCCAGGGGTaccgtaccccctgcagtactccagcGTACCCCCAGGGGTAcggtaccccctgcagtactccagcATACCCCCAGGGGTACGGTACCCCCTGCAATACTCCAGCGTACCCCCAGGGGTaccgtaccccctgcagtactccagcGTACCCCCAGGTGTgggtaccccctgcagtactccagcgtacccccatttgagaacctCTGCTGTAGATACTCAACATCAGCCTAAAGGTGTCATGGTGCATTTCTGACACAGCGCTTTGTCTAAAAGTGTAACGTTGATGAAAGTTGTTCTAAAGTATACTCTGTAGTATTATGTATACTCTGTACTGttagattcaatcggtttcagtcagagtgtgcacaaggcgacgcactgttttaaccacaccctcgacctttagctggcatatggtattgaaattgaggatttaataatataaaacacctccgaaccacattatctaaagacatagctactctggatggtattgccctggcctccagcgctcccagaatgcagagttacttgtggtacctagagtctctaaagcAGAATGGAagccagagcctttagttaccaggctcctctcctatggaaccagctcccaatctgggtttggggggcagaaactgtcacctcattcaagaatgaacttaaaactctcctatttgataaagcttatagttagggagtgaggagttgcagtgtccacctaactggcccacctgcttctcttcataattgttagattaataatacataacaaagtagagggaggcaggccaacACAGCCCGATctggcaggggagagttcaaagCCCGAACAGGTTACCTCTCCTTAtgtcctgtctctcttagttacgctgttatagttctagactgcagggggacttccttccttcctttgacactgagctgctctctcctctccatttctattactatttgtgcgcatcccgtcccagaaatgcttgttattaatcctagcttctggggagtttactccccggagtccttatgttttttcccccagcgtatttccttggagaacgttggcaccaagatcctggttgcagctgtcgccgtggtcctgctgcactccctgctgagctcagcggtgccctgcaatgtcatactgcgtcctgctgaaccctgctgcttcctgctgaaccctgctacttcctgctacgtccatccatgctctgctgggccacgctacatcctgtaacgccctgcagcgccctgatatgacatgaactactacgactaccatttgaagtcactgttccattattaatgggactattatcgccactgttcatcatatccccaaccggcccgtcagacacctcctaccaagagcctgggtctgtcccaggtttcttcctaagagGGAGTTtgtcctcgccactgtcgcactgcttgctcttgagggaattactgtaattgctgtAATTGTAGGGGCTTTGTAAATTTTAgggtgtggtctagacctactctatctatctaagtgtctcgagataactcttgttatgatttgatactataaacaaaattgaattgaattgaatagtagTAGTGTACTCTGTAGTATTATGTATACTCTGTAGTAGTAGTTTACTCTGTAGTATTATGTATACTCTGTAGTATTGTAATGTTTAAAGAGGTCCAGTGTGAACATTACCTGAGATTAACATCTGTTTGGTGTGAAAGGGTTAAAGGTAGACAGGTATGAGGGGGGCGGGTTCATACTCACACACCTTATCAGGTGTAACCATGGTTACAGGTAGCAACAGAAACTCACACACCCCCAGCGTTACCACGGAGATTATTTGGTTTACTGCTGACGTAGAGGGTGAAGTTTACTGGAACTGTTTCATTTATTATTACTCTTCttctttattatatatatacagtatacatatatatatatatatatatataatatatatatatatatatatatatatatatatatatatttaattttttatatgtttgtgtcagaatgttctggatctgatctgttttattttctgtcttttattttgaaatgtaaccCTAAAAATATGAAACCCTAAAAATATGAAACCAGTTTAACCCAGTGTACCCTCTGAGGTCTGCGGAGATCTtcttaaagtatttatttatttatatatatatatatatatatatatatataactgatccctttgtgtttcatatcaaactCAGCTTCCTGTTAGCAGGAGAACTCTAAACAACTTCTGCCGTCTGGTTTAAGCCCGTTTCTAATGTCTCCAAatcaaggcaccaatcacaaccctaactagggttgggtaccggaacc
>TU202702
CATGCATGCTGGGAGCTGGTCGTAGCATGCCTTCAAAGTCGGTAAGCTGTTTCAAAAGAATGGGCGTGGTTATTACCCCGCCCCTCTGTTTATAAGGATAGGAAAAGAAAGAACTTTCTCCACCATCATCAGAACCCTTCCTACCTATAGTCATACAACATAGGCAGCAGAAGAAGAGAGCAGTGAGTTGCCTGGGAGAGCAGAGACATGAGGACTGAACTACAGAGTGGCTGTTTCCTGAgagctgtgtgtctgctgctggtgacctttgaccccggcGCTGCTAAACGCTGTCCGACATGTGACCCAGGTTACTTTGTGATAAAGAACTGTTCAGGGAATGAGGGAATTCAGTGTAGCCGCTGCACAGACTGCtcagCGTCTCATAAGGAAACTCTGGTTAATTGTTCCACGTTTGCCGACTCGTTGTGTGGAAACAAGAGCCCACCTACGACGGCCCAACCTGCAGATTTTTATTCCTCCTGTAGGCGGAGATCATACGGCAGTTCCTCAGGACGTCACAACCAACCCCCGCCCCCTGGAAATTACCTCTGATAAGTCTGCTGCTGAAGTCTGGATCCCCATAACTGTGACAGTATCGTCTCTGTTGCTGGTTCTGCTGGCCGTGTCTCTCGCCATGCTGTCCCGCTGGAAACACCAACCCAAGAAACCAGACGGTCCTGATCAGGTGTGACTGAAGATGAACAGATCAGGGGttgtcaaacttttttcaataatgtacctcctttgaattgtgtttttaacatatttttaaaggaGCATTTTGCTAAAAGttcacataccccctgcagtactccaaagtacccccagGGGTAcagtaccccctgcagtactccagcATACCCCCAGGGGTACGGTACCCCCTGCAATACTCCAGCGTACCCCCAGGGGTaccgtaccccctgcagtactccagcGTACCCCCAGGGGTAcggtaccccctgcagtactccagcATACCCCCAGGGGTACGGTACCCCCTGCAATACTCCAGCGTACCCCCAGGGGTaccgtaccccctgcagtactccagcGTACCCCCAGGTGTgggtaccccctgcagtactccagcgtacccccatttgagaacctCTGCTGTAGATACTCAACATCAGCCTAAAGGTGTCATGGTGCATTTCTGACACAGCGCTTTGTCTAAAAGTGTAACGTTGATGAAAGTTGTTCTAAAGTATACTCTGTAGTATTATGTATACTCTGTACTGttagattcaatcggtttcagtcagagtgtgcacaaggcgacgcactgttttaaccacaccctcgacctttagctggcatatggtattgaaattgaggatttaataatataaaacacctccgaaccacattatctaaagacatagctactctggatggtattgccctggcctccagcgctcccagaatgcagagttacttgtggtacctagagtctctaaagcAGAATGGAagccagagcctttagttaccaggctcctctcctatggaaccagctcccaatctgggtttggggggcagaaactgtcacctcattcaagaatgaacttaaaactctcctatttgataaagcttatagttagggagtgaggagttgcagtgtccacctaactggcccacctgcttctcttcataattgttagattaataatacataacaaagtagagggaggcaggccaacACAGCCCGATctggcaggggagagttcaaagCCCGAACAGGTTACCTCTCCTTAtgtcctgtctctcttagttacgctgttatagttctagactgcagggggacttccttccttcctttgacactgagctgctctctcctctccatttctattactatttgtgcgcatcccgtcccagaaatgcttgttattaatcctagcttctggggagtttactccccggagtccttatgttttttcccccagcgtatttccttggagaacgttggcaccaagatcctggttgcagctgtcgccgtggtcctgctgcactccctgctgagctcagcggtgccctgcaatgtcatactgcgtcctgctgaaccctgctgcttcctgctgaaccctgctacttcctgctacgtccatccatgctctgctgggccacgctacatcctgtaacgccctgcagcgccctgatatgacatgaactactacgactaccatttgaagtcactgttccattattaatgggactattatcgccactgttcatcatatccccaaccggcccgtcagacacctcctaccaagagcctgggtctgtcccaggtttcttcctaagagGGAGTTtgtcctcgccactgtcgcactgcttgctcttgagggaattactgtaattgctgtAATTGTAGGGGCTTTGTAAATTTTAgggtgtggtctagacctactctatctatctaagtgtctcgagataactcttgttatgatttgatactataaacaaaattgaattgaattgaatagtagTAGTGTACTCTGTAGTATTATGTATACTCTGTAGTAGTAGTTTACTCTGTAGTATTATGTATACTCTGTAGTATTGTAATGTTTAAAGAGGTCCAGTGTGAACATTACCTGAGATTAACATCTGTTTGGTGTGAAAGGGTTAAAGGTAGACAGGTATGAGGGGGGCGGGTTCATACTCACACACCTTATCAGGTGTAACCATGGTTACAGGTAGCAACAGAAACTCACACACCCCCAGCGTTACCACGGAGATTATTTGGTTTACTGCTGACGTAGAGGGTGAAGTTTACTGGAACTGTTTCATTTATTATTACTCTTCttctttattatatatatacagtatacatatatatatatatatatatatatatatatatatttaattttttatatgtttgtgtcagaatgttctggatctgatctgttttattttctgtcttttattttgaaatgtaaccCTAAAAATATGAAACCCTAAAAATATGAAACCAGTTTAACCCAGTGTACCCTCTGAGGTCTGCGGAGATCTtcttaaagtatttatttatttatatatatatatatatatataactgatccctttgtgtttcatatcaaactCAGCTTCCTGTTAGCAGGAGAACTCTAAACAACTTCTGCCGTCTGGTTTAAGCCCATTTCTAATGTCTCCAAatcaaggcaccaatcacaacccctaactagggttgggtaccggaacccgggtccactatggaaccggttcctacgcaaacggtagtattcggatcggattagaacgcaaatttcggttcctcttTTGGGTtctgactgaaatattttccctctgtctcaGACTCTTTTCCTTCTCCCTCTGCTGCCGAGTGGCGTGCcggctcgcggtgtgaagcgcgtgttcGTGCTGTTCTCCGACAGCGATGTGCGCTCTAACCATCccagctgatagacggcttttagTACGCGCTCTGAAACACTAAAGCTGAAACGTTGATGAGAAAGACATCTCTTTGACCACCACCCTTAACTTGTGACGGGTGTACGAGTTGTCTCGGTGGCTGACATGAGTCGAGGTCTTCAGGTCACATTAAAGTAGTAAATACACGTTATAATATCACTCAAACATGGGTCTCTGGTCCTCAGAGGGTAAC
>TU202708
AAAGAAACAACTTTCTCCACCATCATCAGAACCCTTCCTACCTATAGTCATACAACATAGGCAGCAGAAGAAGAGAGCAGTGAGTTGCCTGGGAGAGCAGAGACATGAGGACTGAACTACAGAGTGGCTGTTTCCTGAgagctgtgtgtctgctgctggtgacctttgaccccggcGCTGCTAAACGCTGTCCGACATGTGACCCAGGTTACTTTGTGATAAAGAACTGTTCAGGGAATGAGGGAATTCAGTGTAGCCGCTGCACAGACTGCtcagCGTCTCATCAGGAAACTCTGGTTAATTGTTCCACGTTTGCTGACTCGTTGTGTGGAAACAAGAGCCCACCTAACGTCACCGCGACGACGGCCCAACCTGCAGGTAACCTTTCACACCTGAGAC
>TU202710
gtttgtgtcagaatgttctggatctgatctgttttattttctgtcttttattttgaaatgtaaccCTAAAAATATGAAACCCTAAAAATATGAAACCAGTTTAACCCAGTGTACCCTCTGAGGTCTGCGGAGATCTtcttaaagtatttatttatatatatatatatatataactgatccctttgtgtttcatatcaaactCAGCTTCCTGTTAGCAGGAGAACTCTAAACAACTTCTGCCGTCTGGTTTAAGCCCGTTTCTAATGTCTCCAAatcaaggcaccaatcacaaccctaactagggttgggtaccggaacc

Function

GO: NA

KEGG:

id description
ko04512 ECM-receptor interaction
ko05412 Arrhythmogenic right ventricular cardiomyopathy

RNA

RNA id representative length rna type GC content exon number start site end site
TU202698 False 3230 TUCP 0.45 8 37803093 37814879
TU202702 True 3637 lncRNA 0.46 10 37803093 37851881
TU202708 False 399 TUCP 0.51 4 37843221 37848576
TU202710 False 319 lncRNA 0.37 2 37743174 37814879

Neighbor

gene id symbol gene type direction distance location
eno3 eno3,LOC107373383,LOC102226549,LOC107102308 coding upstream 110587 37613778 ~ 37632587 (+)
LOC120573353 NA coding upstream 141102 37594216 ~ 37602072 (+)
LOC120573344 NA coding upstream 185028 37533275 ~ 37558146 (+)
LOC120572651 NA coding upstream 241017 37474468 ~ 37502157 (+)
LOC120573339 NA coding upstream 330477 37387048 ~ 37412697 (+)
mogat3a LOC103373940,LOC102228168,LOC101069338,LOC102789680 coding downstream 10289 37862170 ~ 37883336 (+)
zgc:153012 NA coding downstream 36279 37888160 ~ 37907366 (+)
LOC120573166 LOC101474114,LOC102200943,LOC100707861,LOC108248584 coding downstream 59338 37911219 ~ 37952036 (+)
eif4e2rs1 LOC101069572,LOC100709750,LOC105891435 coding downstream 183934 38035815 ~ 38063462 (+)
LOC120573389 LOC108250633 coding downstream 212820 38064701 ~ 38106195 (+)
G149856 NA non-coding upstream 3890 37738489 ~ 37739284 (+)
G149852 NA non-coding upstream 9192 37733772 ~ 37733982 (+)
G149851 NA non-coding upstream 13656 37729273 ~ 37729518 (+)
G149847 NA non-coding upstream 29767 37707327 ~ 37713407 (+)
G149835 NA non-coding upstream 72536 37636025 ~ 37670638 (+)
G149870 NA non-coding downstream 11303 37863184 ~ 37863701 (+)
LOC120573164 NA non-coding downstream 33796 37885677 ~ 37887539 (+)
G149878 NA non-coding downstream 108039 37959920 ~ 38028577 (+)
G149884 NA non-coding downstream 123459 37975340 ~ 38008410 (+)
G149899 NA non-coding downstream 289983 38141864 ~ 38143226 (+)
G149843 LOC107105148 other upstream 62065 37676995 ~ 37681109 (+)
G149671 slc25a11 other upstream 172466 37567913 ~ 37570708 (+)
G149657 NA other upstream 391330 37351075 ~ 37351844 (+)
G149584 NA other upstream 805032 36937406 ~ 36938142 (+)
LOC120572806 NA other upstream 1266932 36464461 ~ 36476242 (+)
G149880 NA other downstream 317595 38169476 ~ 38457596 (+)
LOC120573406 NA other downstream 412556 38264437 ~ 38358857 (+)
G150060 NA other downstream 611261 38463142 ~ 38521503 (+)
G150081 NA other downstream 830450 38682331 ~ 38728091 (+)
G150139 NA other downstream 1028690 38880571 ~ 38883270 (+)

Expression


Co-expression Network