G149884


Basic Information

Item Value
gene id G149884
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 37975340 ~ 38008410 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU202772
ccatatataCAAAACAACTTTTCACCATTGCTCAAGtagtgttacacatttaaaatatataaaaacaacactatataaaaacgacatacgaaacatttcacacacattataggctccgtaaagttcagctaacaaaGTTAACACAGTTCACGTTGGGAGTtccgttgaagttggatgtagtccagtctgttgtctaatgagcggacacttgcaagcaggatgggggagggaagcacggtcatttgAAAATACTACCgcgtttctactgatacaaagcttaatgctaaaattggtgaagtatccctttaatgtaCAATAGCCTACTTGACTGTGAATTGTGGTGCActagaagtagcctaataagtaggagaaaatgaaaatactgaaTTAAAAGCACCTTAATTGAATTGAAGTAGCCTAGGTATTTTCCACCGCTGATGAAATGTAACGATATCACGTGTAGGCTAAACATTAATTCTTGACATGTTGTTATATGTCAGTTGCTCGGGCATATTGCTGTCGGcactgacaggacacagatgtccCTAGCCTACCATGTCTGGTTCTGactctgaccacgggaacacAGATAGGACCCAGATGTCCCTAACCTACTGTCTCTGGTTCTGactctgaccacgggaacacAGATAGGACCCAGATGTCCCTAACCTACTGTCTCTGGTTCTGactctgaccacgggaacacTGACAGGACCCAGATGTCCCTAACCTACCGtctctgaccacgggaacagtgacgggacagctcgcttcaaAGCAGCGTGAAAACCTCCGGAAAATAATGTCCATGTCACAAaaatatctgtctctgcagtcatttcaACCACAGAATCCAGCAACGGGAAATAATACTCGCAGACTTTTTGTTCTGTGCCGAAATTTTTCGTGGTGTTGGTGAAtctcaaaaaaacaaacactactAAATGTCGGGTTGAATGCGCtgtaactcgcgttactgagattgtaacgatTATAATATTACTGAAATTCTATTAGAAATGTGTTATATTACTGCGTAACAGCGAAAAGGAATACAATACTTGTAATTGCATTACTTTTGTACCGCTTTACTTCCAACACTGCTGCTGACTAAAATCCAACACCCTTTATACACAGCActaatgacatcatcatcagTCCCGACCAATCAGCTGCACTCGTTTCCTTTGACGAGGAAGAAGGTTCCAGCAGCCACACCAAGCAGACCGACAGTCAGACCCAGTccacagaaaactgcaggtccaaTACCGGGCTGAGTCTTCTCcacatctggagacagaaacacagaaacattaagctccacAtctggagacagaaacacagaaacattaagatccacatctggagacagaaacacagaaacattaagatccacATCTGGAGACAGAAACATTAAGATCcacatctggagacagaaaCATTAAGATCcacatctggagacagaaacacagaaacattaaGCTCCACATTTTCTGACCCCAGATTCTGGTCAGTGGTTGGTTAATGAGCTGTTTGTATCTAGTGtgagtgtaaataaagttgtctgacccagattctggtcagtggttggttaatgagctgattgtatttagtgtgagtgtaaataaagttgtctgacccagattctggtcagtggttggttaatgagctgattgtatttagtgtgagtgtaaataaagttgtctgaccCCAGATTCTGGTCAGTGGTTGGTTAATGAGCTGACTGTATTTAGTGtgagtgtaaataaagttgtctgaccccagattctggtcagtggttggttaatgagctgattgtatttagtgtgagtgtaaataaagttgtctgaccCCAGATTCTGGTCAGTGGTTGGTCCAGGGCCAGATGGTTGACTGTACAGCTGTAGATGTCTCCCAGCTGTGGGATGAACTCCAGTCTGGAGAACTGGTTGAAGGAACCATCTTTGTTGGGGTAGGGAACGTTGGTGCTGCTTCCTTCGGTGACGTTCTCTCCGTTCTTTGTCCAGGAGAAGATGACAGGAGCAGGATAGAAACCAGTCACATAACAGATGAGGGTGTTCTTCCTTCGGTGACGTTCTCTCCGTTCTTTGTCCAGGAGAAGATGACAGGAGCAGGATAGAAACCAGTCACATAACAGATGAGGGTGTTCTTCTCTCGGAGCTCCACGGCTTCTTTGGTGTAGACCATCGGACTGGAAGGAGCATCTGAACACAGACACAg
>TU202775
ccatatataCAAAACAACTTTTCACCATTGCTCAAGtagtgttacacatttaaaatatataaaaacaacactatataaaaacgacatacgaaacatttcacacacattataggctccgtaaagttcagctaacaaaGTTAACACAGTTCACGTTGGGAGTtccgttgaagttggatgtagtccagtctgttgtctaatgagcggacacttgcaagcaggatgggggagggaagcacggtcatttgAAAATACTACCgcgtttctactgatacaaagcttaatgctaaaattggtgaagtatccctttaatgtaCAATAGCCTACTTGACTGTGAATTGTGGTGCActagaagtagcctaataagtaggagaaaatgaaaatactgaaTTAAAAGCACCTTAATTGAATTGAAGTAGCCTAGGTATTTTCCACCGCTGATGAAATGTAACGATATCACGTGTAGGCTAAACATTAATTCTTGACATGTTGTTATATGTCAGTTGCTCGGGCATATTGCTGTCGGcactgacaggacacagatgtccCTAGCCTACCATGTCTGGTTCTGactctgaccacgggaacacAGATAGGACCCAGATGTCCCTAACCTACTGTCTCTGGTTCTGactctgaccacgggaacacAGATAGGACCCAGATGTCCCTAACCTACTGTCTCTGGTTCTGactctgaccacgggaacacTGACAGGACCCAGATGTCCCTAACCTACCGtctctgaccacgggaacagtgacgggacagctcgcttcaaAGCAGCGTGAAAACCTCCGGAAAATAATGTCCATGTCACAAaaatatctgtctctgcagtcatttcaACCACAGAATCCAGCAACGGGAAATAATACTCGCAGACTTTTTGTTCTGTGCCGAAATTTTTCGTGGTGTTGGTGAAtctcaaaaaaacaaacactactAAATGTCGGGTTGAATGCGCtgtaactcgcgttactgagattgtaacgatTATAATATTACTGAAATTCTATTAGAAATGTGTTATATTACTGCGTAACAGCGAAAAGGAATACAATACTTGTAATTGCATTACTTTTGTACCGCTTTACTTCCAACACTGCTGCTGACTAAAATCCAACACCCTTTATACACAGCActaatgacatcatcatcagTCCCGACCAATCAGCTGCACTCGTTTCCTTTGACGAGGAAGAAGGTTCCAGCAGCCACACCAAGCAGACCGACAGTCAGACCCAGTccacagaaaactgcaggtccaaTACCGGGCTGAGTCTTCTCcacatctggagacagaaacacagaaacattaagctccacAtctggagacagaaacacagaaacattaagatccacatctggagacagaaacacagaaacattaagatccacATCTGGAGACAGAAACATTAAGATCcacatctggagacagaaaCATTAAGATCcacatctggagacagaaacacagaaacattaaGCTCCACATTTTCTGACCCCAGATTCTGGTCAGTGGTTGGTTAATGAGCTGTTTGTATCTAGTGtgagtgtaaataaagttgtctgaccccagattctggtcagtgattggttaatgagctgattgtatttagtgtgagtgtaaataaagttgtctgaccccagattctggtcagtggttggttattgagctgattgtatttagtgtgagtgtaaataaagttgtctgaccCCAGATTCTGGTCAGTGGTTGGTTAATGAGCTGACTGTATTTAGTGtgagtgtaaataaagttgtctgaccccagattctggtcagtggttggttaatgagctgattgtatttagtgtgagtgtaaataaagttgtctgacccagattctggtcagtggttggttaatgagctgattgtatttagtgtgagtgtaaataaagttgtctgaccCCAGATTCTGGTCAGTGGTTGGTTAATGAGCTGACTGTATTTAGTGtgagtgtaaataaagttgtctgaccccagattctggtcagtggttggttaatgagctgattgtatttagtgtgagtgtaaataaagttgtctgaccCCAGATTCTGGTCAGTGGTTGGTCCAGGGCCAGATGGTTGACTGTACAGCTGTAGATGTCTCCCAGCTGTGGGATGAACTCCAGTCTGGAGAACTGGTTGAAGGAACCATCTTTGTTGGGGTAGGGAACGTTGGTGCTGCTTCCTTCGGTGACGTTCTCTCCGTTCTTTGTTAGGGTAGGGAACGTTGGTGCTGCTTCCTTCGGTGACGTTCTCTCCGTTCTTTGTCCAGGAGAAGATGACAGGAGCAGGATAGAAACCAGTCACATAACAGATGAGGGTGTTCTTCTCTCGGAGCTCCACGGCTTCTTTGGTGTAGACCATCGGACTGGAAGGAGCATCTGAACACAGACACAg

Function

GO: NA

KEGG:

id description
ko04062 Chemokine signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU202772 False 2244 lncRNA 0.43 5 37975340 38008410
TU202775 True 2424 lncRNA 0.43 4 37975340 38008410

Neighbor

gene id symbol gene type direction distance location
LOC120573166 LOC101474114,LOC102200943,LOC100707861,LOC108248584 coding upstream 23304 37911219 ~ 37952036 (+)
zgc:153012 NA coding upstream 67974 37888160 ~ 37907366 (+)
mogat3a LOC103373940,LOC102228168,LOC101069338,LOC102789680 coding upstream 92004 37862170 ~ 37883336 (+)
LOC120573434 NA coding upstream 136304 37837985 ~ 37839036 (+)
eno3 eno3,LOC107373383,LOC102226549,LOC107102308 coding upstream 342753 37613778 ~ 37632587 (+)
eif4e2rs1 LOC101069572,LOC100709750,LOC105891435 coding downstream 27405 38035815 ~ 38063462 (+)
LOC120573389 LOC108250633 coding downstream 56291 38064701 ~ 38106195 (+)
LOC120573398 NA coding downstream 221452 38229862 ~ 38252888 (+)
LOC120573404 NA coding downstream 416467 38424877 ~ 38428658 (+)
LOC120573403 NA coding downstream 443593 38452003 ~ 38456179 (+)
LOC120573164 NA non-coding upstream 87801 37885677 ~ 37887539 (+)
G149870 NA non-coding upstream 111639 37863184 ~ 37863701 (+)
G149857 NA non-coding upstream 231125 37743793 ~ 37744215 (+)
G149856 NA non-coding upstream 236056 37738489 ~ 37739284 (+)
G149852 NA non-coding upstream 241358 37733772 ~ 37733982 (+)
G149899 NA non-coding downstream 133454 38141864 ~ 38143226 (+)
G149902 NA non-coding downstream 143812 38152222 ~ 38155353 (+)
G149881 NA non-coding downstream 162861 38171271 ~ 38292545 (+)
G149912 NA non-coding downstream 245361 38253771 ~ 38368000 (+)
G149914 NA non-coding downstream 278806 38287216 ~ 38289354 (+)
G149853 NA other upstream 123459 37743174 ~ 37851881 (+)
G149843 LOC107105148 other upstream 294231 37676995 ~ 37681109 (+)
G149671 slc25a11 other upstream 404632 37567913 ~ 37570708 (+)
G149657 NA other upstream 623496 37351075 ~ 37351844 (+)
G149584 NA other upstream 1037198 36937406 ~ 36938142 (+)
G149880 NA other downstream 161066 38169476 ~ 38457596 (+)
LOC120573406 NA other downstream 256027 38264437 ~ 38358857 (+)
G150060 NA other downstream 454732 38463142 ~ 38521503 (+)
G150081 NA other downstream 673921 38682331 ~ 38728091 (+)
G150139 NA other downstream 872161 38880571 ~ 38883270 (+)

Expression


Co-expression Network