LOC120572142


Basic Information

Item Value
gene id LOC120572142
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 2038970 ~ 2102372 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039821287.1
gccttcagcagctaacgttagctagctggctgttTAGACAACATAGCTAGCTACCACGGATGTGTTAAGCAATGCACTTTTAAAAGTTACCgcgacaacaatggcttctctttaaagtggtatggacagttttcttgGATGGAATCCAGTGTAAATAAGGACGAGCTTTTCTGCAGCATGTGCAGACATTTCCCCAGCGGAGCTGACGGCCCATCAGCCAGAGAGGAGGCCCTCACACAGAAAATGGCCCACCCACTTTTGTACTGGCCCGcccaaaatactatttctgcCTACGCCCCTGCTTCAAGGACTGCAGTGAactcctcctccccagactgatAAAAAACAAGTTTCAGCAGGTCTGCCTAAACCAGCTGAGGGACCACTGCATAAGCTCCGGCCTGGGGACTTTGGTGATCAAAAGCTTCAGGAGGAAGAACTGGCAGTCCAGATGGTGGGAAGGACCCTTCCAGATCCTCCTGGTCACTCACACAGCAGTCAAGGTCGCGGAACGATCCACGTGGGTGCACGCGACACACTGCAAACAGGTTCCGGACCCAGGAGAGGTGCCAGGTTCGCTAACACCTGCAACAAGTGACGAGCAGGTTCCCTGCTGAGTCACCTACGAGGGAAATCAATTCAGAGACCGGCCTGACAGACGGCGTTTCTGTGCTATCTCTGAAATCAATCGGGGAAAAACTGGAGTTTTTCTCACTGATTTGCAAACACACTGAaggaagagagaaagtgtgACCAACATACTGCTATTGTACCTTTTTGAACACAGCAcattcctgaaaaaaaaaaaaacactcattcTGTGGAGCTCTGATAGCTCTGACACTCACAGCACAATCCTTGTTGGATTGCCTAGATGGCGTTCAGAGTACAACAGGTATCACAGAGCTAATATTACTATCATGGTCAACACTACATCCACTCTTATGCTTCAGCCCTGTGACTTTGTGTGGTGCGGGGAGCATGGAGCATcaataggagagagagaggtatatgTATGTTACATTGCAGAGGTGATGGACATTGGTTATTACAGAGAAGGAGGACCCATATGTTCCTCATGGAAACAAGCTGTTTGGTATACAGGTAATGCAGATTGGGGCTATGAGGTTCCTAACGACCACACAAACCTAACCAATAGATTATcaataaagaaagtaaattATTCCTCAACAGGCATCTTGTTAACATTGACCAATGCTCAGTATTTGGACCAAGGTtactttgttgtgtgtattatgACCTTAGGGAGGCTTCCCTGCGGATCTTTTTATCTTGAAGTAATCTCACCTCCCACATCCAACACAGAATCACCACATTTGACGCAGACTTTTGAAAGTTTATCTAACAGATGGGGATCTTCTGAGGATAATGATGCATTCTCCACTAATGCATGGCTTGGCCTAGTTAAGAAGTTCACGCGTGATGTAGGGTATAATGACTCTTGTTGTTTGTTCACTATTTCCCCACTCTCAGAAGCAGGCTACCCCAGTAAAACCACACACATTGAATCTCACAGAAGTTGTCTGTGCTCTGACAGCACTCAAGGATGTTAGAGAGGAGGGGGGTCAGTTCTATTCAGCTTTTATTCAACCTCCACCTTGTGGAGGTTTTGCGAATCGCACTGTACGTGCTCCAAATGGTACTGTCTTTAAAACTAAAAATGGAAAAGCATCTGATAGTATAGGACAGTTTCACCATAGCCTTATGAAGAATTTGACGCATGCCCTATGCATTGAACGACCTCGTCGCATGGGTTCTCAGTATTTGTGGGTAACCACGGGTTGTCAGCGGACTTTGAATTGTACGTGCGCAACAGGGGATTTAAATATTAGTGCATGCTTACACTCCACACCGGGGTATCTTAGTGCTTCAGTACTGATACCATCTTTGACTCACACCATGCGTTGGCCTGATGATTCTGGCGCAGGGTTTCTAGTGGATTATGTTTGGCTCTGTGGAGACCATTGGTATCAGATTTTGACTCCACAATGGGCAGGAAGATGTAGTATGATATATTTGACACCTTCCATTACAGTTATGACTTCCCTTGTGCATACAACTCACCACTATCCCATGTACGTGCCCACATCTGATGTTTCTACTAGAGAAAAGCGAGAGGTTACCAGCCCAGGAACAAAATTTGCAGCAGGCTTCTTTCCTTGGTATGGAACAGTAAACAATGCACATAATATTGATCGGGTTCAGGAAAGTCTTGAGAATTTGACTGCTATGATGATTTCAGGGTTTGGAGAATTTCCTCCTGTTATGCGAGCTATGACAAACATGCTAATGCAACATCAGATGGGATTGGACCTATTGCTAGCAGCACAGGGGGGACTCTGTCACATCATAGGCACTCACTGCTGCACATGTATCCCAGACAtttcaggaaacatcactgacaCCATTCACCACTTGAACCTACTTTTGACTAATCTCAAAGCACAGGACGTCCCAGAACACTATGCAGGATGGAACTGGTGGGCCTGGGTTTTTCAAGGGGGATGGAAGGCTTGGTTAGCTAGATTTGTTGCACCACTAATAACTTTGATGTTTGGTTTCCTGATCTGTGTATGCTGCATAATCCCACTAGTCAAGAAAATGGTCTCCtccatcttcatggtaaatatgATACAGTATCAGGAACTTCAGAATACCGAGTCCTCTGACTTGTTTCGTCTGTCCAGGTATGATGATGAGGTCCTGGACACCGTTTCTGATACTGTCTGAGACTGAttaaaatttttgttttattatttttacttagACGTGAACGCTTGCTAttattaaaaagtttttttttttttgtacctctTTCAAAAACAGCATTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039821287.1 True 2852 mRNA 0.45 3 2038970 2102372

Neighbor

gene id symbol gene type direction distance location
paqr9 paqr9 coding upstream 296601 1739323 ~ 1742369 (+)
rap1gds1 rap1gds1 coding upstream 418120 1582729 ~ 1620850 (+)
spata6l NA coding upstream 495084 1522996 ~ 1543886 (+)
trmt10a trmt10a coding upstream 519405 1508801 ~ 1519565 (+)
ccdc96 NA coding upstream 533316 1488484 ~ 1505654 (+)
LOC120572444 NA coding downstream 107836 2210208 ~ 2210559 (+)
ank2b ank2,LOC103361685,LOC107384730 coding downstream 176562 2278934 ~ 2450242 (+)
mad2l1 mad2l1,LOC102790739,LOC103155071,LOC106941438 coding downstream 562317 2664689 ~ 2669131 (+)
zcchc4 LOC104953644,LOC104953641 coding downstream 706528 2808900 ~ 2824015 (+)
afap1 afap1 coding downstream 853976 2956348 ~ 3108934 (+)
G140587 NA non-coding upstream 15087 1937849 ~ 2023883 (+)
G140578 NA non-coding upstream 54422 1902652 ~ 1984548 (+)
G140586 NA non-coding upstream 101322 1933298 ~ 1937648 (+)
G140584 NA non-coding upstream 101946 1932222 ~ 1937024 (+)
G140585 NA non-coding upstream 103988 1933228 ~ 1934982 (+)
G140635 NA non-coding downstream 51992 2154364 ~ 2154765 (+)
G140640 NA non-coding downstream 63864 2166236 ~ 2214162 (+)
LOC120572447 NA non-coding downstream 192369 2294741 ~ 2295714 (+)
G140650 NA non-coding downstream 232582 2334954 ~ 2335560 (+)
G140637 NA non-coding downstream 350105 2452477 ~ 2453646 (+)
G140594 NA other upstream 6745 2022592 ~ 2032225 (+)
G140582 NA other upstream 8343 1929623 ~ 2030627 (+)
frem1a frem1,LOC106908230,LOC105925506,LOC101079287,LOC108244244 other upstream 313502 1677210 ~ 1725468 (+)
LOC120572292 NA other upstream 1415935 621116 ~ 623035 (+)
G140263 NA other upstream 1702794 335882 ~ 336176 (+)
ablim2 ablim2 other downstream 725680 2828052 ~ 2954690 (+)
mllt3 mllt3 other downstream 1154141 3256513 ~ 3433803 (+)
zgc:112271 LOC103361642,LOC104959592,LOC100706616,LOC104935668 other downstream 2210779 4313151 ~ 4315545 (+)
G141060 men1 other downstream 2338266 4440638 ~ 4444947 (+)
G141063 NA other downstream 2381320 4483692 ~ 4487607 (+)

Expression


Co-expression Network