si:cabz01074946.1


Basic Information

Item Value
gene id si:cabz01074946.1
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 19657083 ~ 19665792 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039821372.1
TCTCAAAGTCAGTTCGCTTTGCCTCTGTGTTGGAACGATGAAACTTCAAATCCTCCTAACCCTATTAATCCAAGtggCAGTAATTGAATCCCTCAGGGAGGTCTCTGGGTACCTTGGGGATACTGTCACCTTGTCCTCAGGTGCCGACCCATCATGGAATCTTTCCTCAATAGAATGGTCAGTATTCCCAAACAACACCTGGATTGCCACCTACCGCAATgggaacaaaaacattgaacgGGTTGATCGGTATAAAGGTCGACTCAGTCTCAACACCTCCTCAGgtGACTTGATGATCCATAATTTGAACAAAGAGGATGCCATGGAATATACTGTAGACCTCATCAATACTCAGAGACAGAACAAGGGAACCAAAACTAAGCTCACAGTGATACAACGCCTCAACAAACCGATCATCGAGACTGTCTCCTGTGCATCTGTAAAAGGAGGCTCTTGGTTGTGGCTGCGTTGTTCCTCAAAGGATACAGGCGTTAGCTTGTTGTGGCAGCATACATTGCCCAGTGTTACGCTCTTCAAAATGACAAGTCCTGATGGCAACTCTGCCGATCTTTTAGGATTTCTGAACACCACACAGAACCTTGTCGAATTCACCTGCACCTCCAGCAGGAATATGGAGAAGGAGTCAAGTGTCGTCACTCCAAAGTGTGGTGATGACAAGCCTCCGTCTCCGTCTCTGTCTCCGGCTCTGTCTCCGCCCAGAGAAAGaaatgttcttgttttttttgtgggatTCCTCGTGGGAGCTTTACTTGTAGTAATTATATTCGTTTTCAAAGAACAAATCAAAGCTGCATGGGGACACCTTCAAGGAAAACTGTTTCCATCAAAATAATATCATAATAGCTTGACTTTCTGCTTTGACTGTCCCAGGTTTTGCAGTAACAAGTGGTAACATAATGTCTCTTTTCTACAAAGCCAGAATGACTTCACATACACATGACACAATATATTGAATACATGTACAATCTAATTCAAACCACTAAAACAATTTCAAAATCAAGATaaccaacacagacacaaaccaaAAGCTTCAcaataataacattttattgtaCAGGTGTTAATGACAGTATTTTATGCATCTTTATTGCAAAACCCtcacttttatttaattcattttctCTGGTTCtcatgtcttttttcttttttagtatCCTGTCAtgtgaattttttatttttttttttttaaatttcaactTTGGAAATTGTGAGGTACTTATATGTATTAATAggtattttttgtgtgtctatatacatgtatatgtgtAACAGAGTTTTTTAGTGAGTCCACTTGCCAGGGTTTAATCATCCAATACAAATAGGTGTTATTGACATTCTGTATTGTGATTGGTCAGTGGGCGTCTCCTCTGTATGCCCTTGTACGTGATTTAGCGGTGCCAGTGCAGAAGAGCGTGCCTGTGGTAGGCTGGATCGCACCCAGTCATAAGCACATTTTGATTGTttcttttaataatatttcattTACATGCTATGTTGATATGATGATGTATAAATACTTTCGTGTGATGTAACAACGGCTATGTATACACTGTTTGAAATGCTTATTTCGTGAAATGTAAAGAAAGCTGCTAAGAATGACTGGGTGTGTACGCTGTGTCCTACGTGGCTGACCAGGATATAATTCTTTGTTCACCAGGTAcatattgtatttttgtttacacatttatttaatttagtgTCGTGttgtaatattatataatagGCCAGTGCACGAGGAGCGTGCCCGTGAATGACCGTGGGTGTGTATGCTGTGTCCTACGTGGCTGACCAGGATATAATTCTTTGTTCACCAGAATAAATCAGACCAGATTGAGATGCAAGTGTGAAGTCTGCAATTAATACACAACGCAGAGATGATATTGGTTACATATTATCAAGCTTTTTTGATAATTTCAATGCTTAAAAGGGCAAACTATATGTAGATGTAATGTATGCACTAGATATATTGTGCTGTTCTGTCTCAGTGTTTGTTGTAAACTATTTTCCAATGTTATGTACCATTTTGACTGAAGTATTGTAAATACATGTGTGTGGAAGAGTAA
>XR_005641381.1
TCTCAAAGTCAGTTCGCTTTGCCTCTGTGTTGGAACGATGAAACTTCAAATCCTCCTAACCCTATTAATCCAAGtggCAGTAATTGAATCCCTCAGGGAGGTCTCTGGGTACCTTGGGGATACTGTCACCTTGTCCTCAGGTGCCGACCCATCATGGAATCTTTCCTCAATAGAATGGTCAGTATTCCCAAACAACACCTGGATTGCCACCTACCGCAATgggaacaaaaacattgaacgGGTTGATCGGTATAAAGGTCGACTCAGTCTCAACACCTCCTCAGgtGACTTGATGATCCATAATTTGAACAAAGAGGATGCCATGGAATATACTGTAGACCTCATCAATACTCAGAGACAGAACAAGGGAACCAAAACTAAGCTCACAGTGATACAACGCCTCAACAAACCGATCATCGAGACTGTCTCCTGTGCATCTGTAAAAGGAGGCTCTTGGTTGTGGCTGCGTTGTTCCTCAAAGGATACAGGCGTTAGCTTGTTGTGGCAGCATACATTGCCCAGTGTTACGCTCTTCAAAATGACAAGTCCTGATGGCAACTCTGCCGATCTTTTAGGATTTCTGAACACCACACAGAACCTTGTCGAATTCACCTGCACCTCCAGCAGGAATATGGAGAAGGAGTCAAGTGTCGTCACTCCAAAGTGTGGTGATGACAAGCCTCCGTCTCCGTCTCTGTCTCCGGCTCTGTCTCCGCCCAGAGAAAGaaatgttcttgttttttttgtgggatTCCTCGTGGGAGCTTTACTTGTAGTAATTATATTCGTTTTCAAAGCTCCAGCCCACGCATCAAACCAAGATACAATACAACATTTGTCCTAAAGGTTACAGTTTCCCAAAATGACACCGATATAGCTCCTATCGTTGACTTTACACTGTGTTGAGAACATAGACACATACATGTGACCATAAAAACAGCCCAGCTGTAATTTTAAAGCAATTATGttgacattgtttttaaattacagAACAAATCAAAGCTGCATGGGGACACCTTCAAGGAAAACTGTTTCCATCAAAATAATATCATAATAGCTTGACTTTCTGCTTTGACTGTCCCAGGTTTTGCAGTAACAAGTGGTAACATAATGTCTCTTTTCTACAAAGCCAGAATGACTTCACATACACATGACACAATATATTGAATACATGTACAATCTAATTCAAACCACTAAAACAATTTCAAAATCAAGATaaccaacacagacacaaaccaaAAGCTTCAcaataataacattttattgtaCAGGTGTTAATGACAGTATTTTATGCATCTTTATTGCAAAACCCtcacttttatttaattcattttctCTGGTTCtcatgtcttttttcttttttagtatCCTGTCAtgtgaattttttatttttttttttttaaatttcaactTTGGAAATTGTGAGGTACTTATATGTATTAATAggtattttttgtgtgtctatatacatgtatatgtgtAACAGAGTTTTTTAGTGAGTCCACTTGCCAGGGTTTAATCATCCAATACAAATAGGTGTTATTGACATTCTGTATTGTGATTGGTCAGTGGGCGTCTCCTCTGTATGCCCTTGTACGTGATTTAGCGGTGCCAGTGCAGAAGAGCGTGCCTGTGGTAGGCTGGATCGCACCCAGTCATAAGCACATTTTGATTGTttcttttaataatatttcattTACATGCTATGTTGATATGATGATGTATAAATACTTTCGTGTGATGTAACAACGGCTATGTATACACTGTTTGAAATGCTTATTTCGTGAAATGTAAAGAAAGCTGCTAAGAATGACTGGGTGTGTACGCTGTGTCCTACGTGGCTGACCAGGATATAATTCTTTGTTCACCAGGTAcatattgtatttttgtttacacatttatttaatttagtgTCGTGttgtaatattatataatagGCCAGTGCACGAGGAGCGTGCCCGTGAATGACCGTGGGTGTGTATGCTGTGTCCTACGTGGCTGACCAGGATATAATTCTTTGTTCACCAGAATAAATCAGACCAGATTGAGATGCAAGTGTGAAGTCTGCAATTAATACACAACGCAGAGATGATATTGGTTACATATTATCAAGCTTTTTTGATAATTTCAATGCTTAAAAGGGCAAACTATATGTAGATGTAATGTATGCACTAGATATATTGTGCTGTTCTGTCTCAGTGTTTGTTGTAAACTATTTTCCAATGTTATGTACCATTTTGACTGAAGTATTGTAAATACATGTGTGTGGAAGAGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039821372.1 False 2084 mRNA 0.39 7 19657083 19665792
XR_005641381.1 True 2277 transcript 0.39 7 19657083 19665792

Neighbor

gene id symbol gene type direction distance location
LOC120572523 NA coding downstream 69006 19587130 ~ 19588077 (-)
LOC120572473 NA coding downstream 103242 19529160 ~ 19553841 (-)
LOC120572474 NA coding downstream 133093 19512028 ~ 19523990 (-)
pnp5a pnp,LOC103368940 coding downstream 250725 19403481 ~ 19406358 (-)
sf3b2 sf3b2 coding downstream 287448 19357363 ~ 19369635 (-)
LOC120573581 LOC103480354,LOC103144605,LOC104935705,LOC104965865 coding upstream 1907 19667699 ~ 19677622 (-)
arhgef11 arhgef11 coding upstream 13463 19679255 ~ 19702223 (-)
LOC120572266 NA coding upstream 214548 19880340 ~ 19894923 (-)
cbln11 NA coding upstream 399004 20064796 ~ 20070624 (-)
LOC120572528 NA coding upstream 414949 20080741 ~ 20085137 (-)
LOC120572478 NA non-coding downstream 110660 19544171 ~ 19546423 (-)
G144476 NA non-coding downstream 421559 19234321 ~ 19235524 (-)
G144425 NA non-coding downstream 556246 19100428 ~ 19100837 (-)
G144424 NA non-coding downstream 556853 19099980 ~ 19100230 (-)
G144423 NA non-coding downstream 557886 19098894 ~ 19099197 (-)
G144585 NA non-coding upstream 666 19666458 ~ 19667497 (-)
G144735 NA non-coding upstream 51192 19716984 ~ 19815341 (-)
LOC120573676 NA non-coding upstream 73566 19739358 ~ 19742781 (-)
LOC120573678 NA non-coding upstream 80713 19746505 ~ 19746825 (-)
LOC120573677 NA non-coding upstream 89428 19755220 ~ 19755722 (-)
LOC120572670 NA other downstream 303777 19282933 ~ 19353306 (-)
prkd4 LOC103376196 other downstream 390730 19247950 ~ 19266353 (-)
clcn3 clcn3 other downstream 600301 18962866 ~ 19056782 (-)
G144258 NA other downstream 1059852 18595102 ~ 18597231 (-)
c14h4orf48 cunh4orf48,lg24h4orf48,lg3h4orf48,c18h4orf48,LOC102785068 other downstream 1117460 18536143 ~ 18539623 (-)
G144730 LOC100695354,LOC106632790,LOC105940461,LOC104965881,LOC101481059,LOC106632521,LOC103369240,LOC102791106 other upstream 110888 19776680 ~ 19797530 (-)
LOC120573300 slc12a6 other upstream 1161491 20827283 ~ 20863889 (-)
nop10 NA other upstream 1198965 20864757 ~ 20867106 (-)
LOC120573168 LOC103355779 other upstream 1240663 20906455 ~ 20929559 (-)
si:dkey-172j4.3 LOC102306481,LOC103363024,LOC100708735,LOC101468909,LOC102781820,LOC101073787,LOC108246481,LOC106609052 other upstream 1685450 21351242 ~ 21438456 (-)

Expression


Co-expression Network