LOC120572218


Basic Information

Item Value
gene id LOC120572218
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 21120201 ~ 21127069 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039821423.1
ACAAGTGCTGGTAACACACCTGTTAAGGAGTACCTGTCTGTAGACCCACAAAGGCAGAAATATGTTGTCTGAGGAGCAGTTTCGGTGCAGCATCTGTCTTGATATCTTCAACAAACCTGTCTCCATCCCATGCGGGCATAACTTCTGCATGGGATGCATCAACCGCTTCTGGGATACGAGACATAAGTCAGAGTGTCCGCTGTGCAAAGAGGCCTTCAGAAAACGCCCAGAACTGAGGATCAACGTAGGCTTAAGAGACATCACCGAGCATTTTAAAAGATCTATAATTGGCCAGCCAACATACAAGCCAGCCCCAGCAAAGAGAAGTATCCTAAGACAACCTTCTATGTCTGATGTTCCCTGTGACGTCTGCCAAGGAACCATTGTAACGGCGGTTAAGTCGTGCTTCGTCTGCCAGGAATCTTACTGTGAAACTCACTTGACACCCCATCTAAGAGATACAATGCTGACGAAGCACAGGCTGACAGATCCGCCCACCTTCATCACCAGTCACCTCTGCATAAGTCACAACAAGGTCCTGGATATGTTTTGCAAGACGGAACAGATACCTATTTGTATGAAATGCAGAGAAAGGGACCACAGACACCATGAGATCGTCCCGATAGAGAAGGAAAGCATGTTGGTCAGGACTAAGTTGaaggaggctgaagcagactTTCAGCATATGGTCAACACCAGAGTGAAAAAGCTGGAGGAGGTCATAGCTTCAGTAGAGTCGAGAAAAATGAATGAAGAACAAGCATTACACACAAGCATTCAGGTCGCCAACATGGTGAGTGGCATCATTGAAAAGAACCAGGCTTCGCTAATCCAGGAGATCCAGCAGAAGCGGGAAGCATCCGAGGGGATAGAGAAGGAGCTTATCAAAGAGCTCAAGGGGGAAATCAATGAGCTGCAGAGGAGACGAAGTGAACTGCAGCACCTGGAGAACTCCGGCGACCCTCTTCATCTCCTACAAAGTTTCCCCTCTCTGAATTCTCCGCTGTCCACCAGGGACTGGACCAAGGTCAGAGTGAACTCGAACAGCTACATAGGGACAGTGAGGAGAGCTTTCTCCAAGCTGGTGGACGTGTGCCATACACTTGAAAAGAAACTGTCTGCAGAAGAAATGAGTAAGGCAAGTCAATATGCAGTGGATGTGACTTTGGATCCAGTGACTGCTTCGGGCTGGCTGTGTCTATCCCCAGATAGGAAACAGGTGAGCCTAAGCCTCCAGCAGAAGAAACCCTCTCCCCCTGACGACCCACGCAGGTTTGACTCATGCGTCTCAATTCTGGGGAAAGAAAGCTTCACCTCTGGGAGACATTACTGGGTGGTTCAGGTTGGGAATAAAACAGACTGGGATCTTGGTGTGGCCAAGGAGTCCATCAACAGGAAGGGGGCCATCACGGTGCGTCCCGACAACGGTTACTGGGCAATCTGCCGGAGGAAAGGCGGCAGTCTCAGCGCCTGTGCCGGTCCCTCCGTCACCCTCCACATTTACGAAACCCCCCAAAAAGTCGCTGTGTTCCTAGACTACAAGGAAGGGTTGGTGTCCTTCTACGACGCAGAAGCAAAGACCCACATTTACACTTACAGCGGGTGTGACTTCACTGAGACACTATACCCGTACTTAAACCCCTGTCTTCATGACAACGGGAAGAACACCGCCCCGCTGATTATCTGTCCTGTTGAGCTTGGGCACGTTGAAGAGATTGCGACATTTTGAACGGGAGATTCAGGGCACATTTCCTTATCAGTCATAAGAAAGGTTAAATTAGGTGAACACCACCCACTTCTGAGTAAATAATTGCTATACAGCCAGTCTTTACAGTGTTGTTTGTCCACTTTAgcaattacaaaaataaataggctCAAAGACTTACAAGTTCAGAAACACATTCACCAAATTGAAAAgcttagggaccgttcggtatttatggaatggaccactggaggaaaataggggagggtcatgtctttttattct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039821423.1 True 1990 mRNA 0.48 10 21120201 21127069

Neighbor

gene id symbol gene type direction distance location
LOC120573066 NA coding downstream 50119 21065168 ~ 21070082 (-)
LOC120573065 NA coding downstream 69913 21045556 ~ 21050288 (-)
si:dkeyp-74b6.2 LOC103144634,LOC104951882,LOC103355776,LOC102776090 coding downstream 150790 20963708 ~ 20969411 (-)
khnyn NA coding downstream 173219 20934518 ~ 20946982 (-)
si:cabz01101003.1 LOC103355780,LOC101167576,LOC103480376 coding downstream 214660 20893966 ~ 20905541 (-)
LOC120572532 NA coding upstream 4499 21131568 ~ 21132550 (-)
rab39bb rab39b,LOC107091979,LOC106527197 coding upstream 40430 21167499 ~ 21184457 (-)
zgc:109889 LOC103480395,LOC103144648,LOC102211070,LOC101469879 coding upstream 361563 21488632 ~ 21534404 (-)
htr2cl1 LOC101072775 coding upstream 410078 21537147 ~ 21683352 (-)
clcn5b clcn5 coding upstream 873526 22000595 ~ 22039565 (-)
G145106 LOC104951910 non-coding downstream 19395 21055824 ~ 21100806 (-)
G145112 NA non-coding downstream 142185 20976655 ~ 20978016 (-)
G145076 NA non-coding downstream 188480 20931066 ~ 20931721 (-)
G145023 NA non-coding downstream 274948 20843574 ~ 20845253 (-)
LOC120573348 NA non-coding downstream 333812 20783569 ~ 20786389 (-)
G145141 NA non-coding upstream 31833 21158902 ~ 21161476 (-)
G145213 NA non-coding upstream 348314 21475383 ~ 21479973 (-)
G145330 NA non-coding upstream 915357 22042426 ~ 22042693 (-)
G145327 NA non-coding upstream 952065 22079134 ~ 22079491 (-)
G145325 NA non-coding upstream 1020509 22147578 ~ 22153086 (-)
LOC120573168 LOC103355779 other downstream 190642 20906455 ~ 20929559 (-)
nop10 NA other downstream 253095 20864757 ~ 20867106 (-)
LOC120573300 slc12a6 other downstream 256312 20827283 ~ 20863889 (-)
G144730 LOC100695354,LOC106632790,LOC105940461,LOC104965881,LOC101481059,LOC106632521,LOC103369240,LOC102791106 other downstream 1322671 19776680 ~ 19797530 (-)
si:cabz01074946.1 NA other downstream 1454409 19657083 ~ 19665792 (-)
si:dkey-172j4.3 LOC102306481,LOC103363024,LOC100708735,LOC101468909,LOC102781820,LOC101073787,LOC108246481,LOC106609052 other upstream 224173 21351242 ~ 21438456 (-)
G145209 NA other upstream 276786 21403855 ~ 21434195 (-)
ccnb3 ccnb3 other upstream 754221 21881290 ~ 21979426 (-)
shroom4 shroom4,LOC107741461,LOC107562256,LOC107691917 other upstream 918432 22045501 ~ 22126481 (-)
G145342 NA other upstream 1102990 22230059 ~ 22230502 (-)

Expression


Co-expression Network