LOC120572220


Basic Information

Item Value
gene id LOC120572220
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 6221971 ~ 6231297 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039821425.1
gagaaagaaagagacatctTACATCTTGAGATTGGTCAACTTCCTGTGCTGCATCAAAAGTGTGACAGGGGTATAAGGGTGTCAGCATGCTGTGgtgacaggcacacacacactgctcttcCGCTGGATCTTCACCCTCTTTTTGATCATCCAACAGGTCATTATGCCCACCAACGCCTCCGTTGTCTGCAACATCACCACCAACGCCTCCGTTGCCTGCAACAGCAGCAGACAACCTGACGTCTTCCATGTGTGCATGTActcctttattttcattctgGGTCTCGTTTTTAATGTCCTGGCACTGGTCTTTTTCTGCTGTCAAACCAAATCCAGATCGCAAACCATTGTCTACATGACTAACCTGGCCTTAGCAGATGTGCTGCTCACCCTCACACTGCCCATGAGGATCTATTACCATCTAGGCTATTGTGGCCTTCCTGACCTGCTGTGTGAAGTCCTTGGTTTGGTCCTGAAGGCCAACATGTATGGGAGCATCTTCCTTCTCACGTGCATGTGCTTTGACCGTTGCATGGCCGTCTCCTTCCCTATGTCATCTCGTGTCCAGGCAGGGAGAAAGAAAGCGCCGCTGGTTTGCCTTGGAATATGGATGCTCACCTTCGGGGCCAGCTTGCCCATCTACATTAAGCAAACAAACGTGATCCATGATGAGTATTGTTTTGACAGATTTCCGGTCTTAGCCACAAAGCCAGTGGTGGTTGTACCCACTCTGTTTGTGGGGTTTGGGATCCCGCTAGTAATCATGCTGATCTGTTCCTGGGGTTTGGTCCGTGCTGTCCGACGAAGCTCAGTGGCCCAGACCAACCTGGTGGACAGCAGAAAGATCCAGAGGATGATTGCCGCCAGCCTCTTCATTTTCCTACTCAGCTTCCTCCCTTACCACGCCACCCTGGGTCTACTCTCTGTGTATGGAGAAAATACACCATCCCCAATGAAGGCTGCATACCGCTACAGCCTAATGTTGGCATGTCTCAACTCAGTACTAGATCCTATTGCGTACTACTTCACCACGGACACCTTCAGGAGGAACATAGACATAGGTGCTGTTTGGAGGATGTTTCCTTTGAATAGTCAAAGTTCTGATGTGAACAACAGGAGCAATATGCATAACAGCTAAAAGACTGCTGGAGAACCACCCAACAGACACTGCCATCCAACAAACTCCAAGGCCGACTGTCAACAGCACAACCACTTTTAACATTAAGTTGGCAGATTTCATGTTTCCAATGAACATATTCCGCCTGCAATCTTCTGCAGTTTGTAGGGTTCAGTTTGAGGTATACTGTTTAACCCAGACAGCGATTAAATATGTAACCCTCCCTCAAAAGAACCATTCCATACTTCACCACAGTCCATGGCGGTGCCACCACACAAAAACGTCCGCCCTCTGGAGTGTCCACAAGCCAAAATATTGATTTAGCCGAACAACTATGTAttgttaaatattaattttgattgtttttgtacAATTATACATGTATTTTCTATGGTAGATGCATTTTTCAAGTCCATCTGGAAAAGcgttaaaggtattgtggaggattttctttttccgggtggatcatcaagactattggtcctcctagttgtcaatcattctggcgctatgttta
>XR_005641400.1
gagaaagaaagagacatctTACATCTTGAGATTGGTCAACTTCCTGTGCTGCATCAAAAGTGTGACAGGGGTATAAGGGTGTCAGCATGCTGTGgtgacaggcacacacacactgctcttcCGCTGGATCTTCACCCTCTTTTTGATCATCCAACAGGACAGGAACAGCTCTTCTGTGTTTGCAGCCCTGCagcgttaccttctgcttttgCTTGTGTCTGCACGATTTGAAGAGATGTATGTACATGATGGAGCGGCACGCATTGAAATCATGTCTGTGGTTTCCTTTCCACCACCAGACAAGCAGTTCTGAGGAAGCAGACTGGCACCTGAAGTAGTCTACCACCGGGAGTCACCAATTCTCCAATTCAACACAGATGATCAAAAAGACGCAGTGCCAATCCCAACTGTCTCCAGGATAGTCTTCCTAAATGCAATGAGGCGAAAGGAACATTTATACACTGTGTCTGGGAGTgtgacaaaatgaaaacattctggAGGGAGGGGATCAATAAAACTAAGTTCATCTTGTCAGTGAACATTCCACTTGACCCTAAAATGATATTTGCTGCACCTGTATCCAACAAATCTCAATCTGACACCCCAAGAATATAATAGTATTGATTTTGCTATACTACAGACAAAAAGGACTATAGCTctcatttggaagaaaatggAGCCACCTACAATTGGTGCTTGGATCAATTGCGCAATGTATGTCCATGTAAaaacgtatatatatatttatatatatatatgtgtgtatatatacgcatacactactggtcaaaagt
>XR_005641401.1
gcacaggttgggctctccactgatgcctcagtcgcgaagtttctactcgacagGACAGGAACAGCTCTTCTGTGTTTGCAGCCCTGCagcgttaccttctgcttttgCTTGTGTCTGCACGATTTGAAGAGATGTATGTACATGATGGAGCGGCACGCATTGAAATCATGTCTGTGGTTTCCTTTCCACCACCAGACAAGCAGTTCTGAGGAAGCAGACTGGCACCTGAAGTAGTCTACCACCGGGAGTCACCAATTCTCCAATTCAACACAGATGATCAAAAAGACGCAGTGCCAATCCCAACTGTCTCCAGGATAGTCTTCCTAAATGCAATGAGGCGAAAGGAACATTTATACACTGTGTCTGGGAGTgtgacaaaatgaaaacattctggAGGGAGGGGATCAATAAAACTAAGTTCATCTTGTCAGTGAACATTCCACTTGACCCTAAAATGATATTTGCTGCACCTGTATCCAACAAATCTCAATCTGACACCCCAAGAATATAATAGTATTGATTTTGCTATACTACAGACAAAAAGGACTATAGCTctcatttggaagaaaatggAGCCACCTACAATTGGTGCTTGGATCAATTGCGCAATGTATGTCCATGTAAaaacgtatatatatatttatatatatatatgtgtgtatatatacgcatacactactggtcaaaagt

Function

GO:

id name namespace
GO:0007165 signal transduction biological_process
GO:0004871 obsolete signal transducer activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039821425.1 True 1634 mRNA 0.47 2 6226997 6231297
XR_005641400.1 False 794 transcript 0.42 3 6221971 6231297
XR_005641401.1 False 690 transcript 0.42 3 6221971 6226806

Neighbor

gene id symbol gene type direction distance location
trappc14 LOC104941436 coding downstream 36347 6158858 ~ 6185624 (-)
trnas-uga_22 NA coding downstream 193049 6028841 ~ 6028922 (-)
serpine1 serpine1 coding downstream 216753 5998118 ~ 6005218 (-)
vgf NA coding downstream 254543 5959440 ~ 5967428 (-)
trnal-aag_6 NA coding downstream 264839 5957051 ~ 5957132 (-)
tm4sf21b NA coding upstream 6276 6237573 ~ 6243669 (-)
eif4a1a LOC107098142,LOC103365478,LOC100693841,LOC103148870,LOC102238331,LOC101477102 coding upstream 100391 6331688 ~ 6340737 (-)
LOC120573734 NA coding upstream 104197 6335494 ~ 6335632 (-)
LOC120573735 NA coding upstream 105324 6336621 ~ 6336759 (-)
senp3b LOC104962536 coding upstream 112332 6343629 ~ 6361111 (-)
G141601 NA non-coding downstream 64558 6156052 ~ 6157413 (-)
G141470 NA non-coding downstream 229744 5989895 ~ 5992227 (-)
G141468 NA non-coding downstream 250584 5970935 ~ 5971387 (-)
G141467 NA non-coding downstream 251358 5969951 ~ 5970613 (-)
G141416 NA non-coding downstream 510255 5711434 ~ 5711716 (-)
G141612 NA non-coding upstream 34143 6265440 ~ 6266025 (-)
G141613 NA non-coding upstream 34854 6266151 ~ 6266583 (-)
G141667 NA non-coding upstream 224642 6455939 ~ 6511995 (-)
G141683 NA non-coding upstream 327001 6558298 ~ 6645212 (-)
G141688 NA non-coding upstream 345880 6577177 ~ 6578755 (-)
gal3st4 gal3st4,LOC104939968 other downstream 1711 6177921 ~ 6220260 (-)
G141439 NA other downstream 378825 5743559 ~ 5843146 (-)
G141400 NA other downstream 621509 5596958 ~ 5600462 (-)
cd99l2 cd99l2 other downstream 638976 5560026 ~ 5582995 (-)
nat16 nat16 other downstream 746816 5424561 ~ 5475155 (-)
sox19b LOC104926817,LOC103365479,LOC100693580,LOC102199731,LOC101477749,LOC104962535 other upstream 77601 6308898 ~ 6315817 (-)
LOC120572256 NA other upstream 122167 6353464 ~ 6371100 (-)
tbc1d14 tbc1d14 other upstream 144675 6375972 ~ 6416457 (-)
LOC120572295 rasgrp2,LOC104942268 other upstream 1417675 7648972 ~ 7703618 (-)
fcer1g NA other upstream 1550614 7781911 ~ 7787667 (-)

Expression


Co-expression Network