LOC120572242


Basic Information

Item Value
gene id LOC120572242
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 2019612 ~ 2022367 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039821465.1
acagctgccccaacaactgctgtaCCTAatactgcagcacctacaacagcagcagctaCAACTTCTGCAcgtacaacagcagcacctatgACAACTGCACCTAAAACAACTTCTTCTACAACAGGCGCATCTTCAACAGCCGCACCCATCACTTTGGCCCTTGAACCTGTTTACAGCCTCTCACTAGACTTGGGAGGAGAACCTTTCTCAAATGCCCTTACTGACCCGAGCAGCAGGGAATACATAAACCTTGAAGAACGAGTCATAAATACGTGTTCTGCGATATACAAAAAAGAATTTGGAAACAAGTTTGGCCACTGCAACGTGAAAAAGTTCAGTGCCTTACCTCCAACACGAGCGACTGGTACTGAAGCAGCTATTGAGGTTGTGTTCAATAGGACTACTCCTATTGCAGATCTCCCACAGAATAATGTCATTGCTGAAGTCTTAGTAAAAGCTGTGACTAATCCAAACAATACTTTCAATGTGAGCATAAATCCAGCCTCAATCAAAGTACTAGaAGGTCCAGTTCCAGCTACAACCacagcacctacaactgctgcacctacaactgcaaCAGCTACATCTACCTCACTAACAACTGGCATATCAACTACTGCttcacctacaacagcagcacctatcactgctgcacctacaactgcagcacctacaacagcaagGGTGTCTTTCAGATCTGTTCAAAGCACATTTACAAATGACTTGCTAAATCCATCATCTACAGCTTTTAAAAATCGAGCTGCAATGATAAAGGGACAGCTTGAACCTATTTTTCTTAGGACATTCCCTTCCTCCTTCAAGACCTTGGAAGTGGTTTCATTCAGGAGTGGATCAGTCATCAACACCATTGACCTTAACTTTGTAAGCCCATTTGCCCCTAATAACACTCAGATTGCAAGCACTTTGATCAACGCAGCTTCAAGCGTCAGTGGCTTCGACATTGAAGGCAGCTCCATCAACGTGAACGGCATCTTGTCAAGTGGAGTAAGTCAGAAGATGAGTCTCGTCACCgcatcctgccttgtactgttGTCATGGCTACTGTCAAGCCAACAATAGCATACGTACTGATAAACATGACTGCCATCACTGGCATGAAAATGGACTTTGTTGTCAGTAAACATCAAAAATTCTTGAATGTCTGAAGTCTTTTACAGCTTTGGATGAACCTGCTGTCAAATTCAACTTTTAAGCACCTGGTCAATGGAACCATTACTAGAATAGTAAACCATATAATATAACATTAGGCTCTGgaatgtcagaaaataattGCACtattaatatacaaataaattctTTAGTCTTTACTGAGCACTGTcctataatcaatatttaacTTAGTTTCAGTTTTCTTGACAGAAGGTAACACCATGAAATTACTTTCATTATGTTCTGAATGAAGTTTGATCAAAAGTCATGGTGTACATGCCATGGTATacattatgtatgtatatatacataaaaaaagatctgtgtctgtgtgtgtgtgtgatatactgtatgtgccaaaataatacacagtaaattctgtttcttcaaagtatatttatttatgctgTATTCTGTGATATTTCCAATAGCTTGTACAATTTCTGTGAACACTTTACAATGATCACAATATAAAATCTTGGATTAATTTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039821465.1 True 1663 mRNA 0.40 7 2019612 2022367

Neighbor

gene id symbol gene type direction distance location
LOC120573473 NA coding downstream 133925 1883902 ~ 1885687 (-)
aco1 aco1 coding downstream 244694 1749519 ~ 1774918 (-)
LOC120573508 LOC103361692 coding downstream 354667 1660137 ~ 1664945 (-)
slc1a1 slc1a1 coding downstream 445488 1550528 ~ 1574124 (-)
LOC120573289 NA coding downstream 519296 1492274 ~ 1500316 (-)
pde5ab pde5a coding upstream 656578 2678945 ~ 2797531 (-)
si:dkey-219e21.4 NA coding upstream 790188 2812555 ~ 2818659 (-)
c14h4orf54 NA coding upstream 1094867 3117234 ~ 3128616 (-)
focad focad coding upstream 1144501 3166868 ~ 3252975 (-)
LOC120573709 H2AFZ,LOC100694115,LOC102297571,LOC102200939,LOC101065890 coding upstream 1433153 3455520 ~ 3457848 (-)
LOC120572308 NA non-coding downstream 51962 1966607 ~ 1967650 (-)
G140603 NA non-coding downstream 55780 1959644 ~ 1963832 (-)
LOC120572355 NA non-coding downstream 78244 1938467 ~ 1941368 (-)
G140601 NA non-coding downstream 110968 1907245 ~ 1908644 (-)
G140597 NA non-coding downstream 114345 1901027 ~ 1905267 (-)
G140619 NA non-coding upstream 33922 2056289 ~ 2059027 (-)
LOC120572143 NA non-coding upstream 60298 2082665 ~ 2085669 (-)
G140675 NA non-coding upstream 72000 2094367 ~ 2195674 (-)
G140683 NA non-coding upstream 132002 2154369 ~ 2154765 (-)
LOC120572445 NA non-coding upstream 252844 2275211 ~ 2275993 (-)
tspan5a LOC100711712,LOC102299272,LOC102195201,LOC105938388,LOC103480072 other downstream 370180 1623259 ~ 1649432 (-)
tada2b tada2b other downstream 531186 1482789 ~ 1488426 (-)
G140274 NA other downstream 1567942 443550 ~ 451670 (-)
G140615 NA other upstream 29114 2051481 ~ 2058191 (-)
camk2d1 LOC100695450,LOC101472930 other upstream 431699 2454066 ~ 2573483 (-)
arsj arsj other upstream 575467 2597834 ~ 2622100 (-)
LOC120573530 NA other upstream 1116754 3139121 ~ 3143189 (-)
G141003 NA other upstream 2132557 4154924 ~ 4155547 (-)

Expression


Co-expression Network