LOC120572266


Basic Information

Item Value
gene id LOC120572266
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 19880340 ~ 19894923 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039821504.1
ATTGTGCCCTGGTCAAAGTCACTTGCTACACCCACACTGGTAGAGGAATTACTAAGGAAATGTCTGGTTGTCCGCATCGTGACAAGCAGGTGGGCCAAGTCTAAGTGGGTACAGCAAGACATTATGATGAGAAATAAAAAGtaggaaaaagaagaggaagagagaaaaggtAAAACAGATATGGATGATGTTAGGCAAACTCTCTATCAAAACCACCCTCTTCACCATCCCCCCTTAATTTCTCCAGAAGATCTCTTCTCTTACACCCTTCCCTCACACTCTGATACCCTCTTCACTCGCCTAAATAGCCTCAAGGAGGAAGATCTACTTCTGGACTGCATTTTCCCCCTCCAAGGCAAATCTTTCCAAGCTCACAGACTTGTTCTGGCAGCTGCCAGTCAAACCCCTGATGTATTTTTTGGCTCTAAACTCAAATGTGGGCTTGGAGTGGAGAATATAGCACATTGTTTGACCCCAGTTGGGTTAAGTGCTGTTCTGGACTTTGCGTACTGTGGAAATGTAGCCGTAGACTTGAGTAAGAAAGGGGTAATGGAGGAGGTGCTGCATGCTTGCAGGTTCCTAGAGATGGAGAGGTTGAGTCAAAGGTGCACGTCAAAAGTCAAAACCTCTGcggccacagagagagagaagagcttGGCTAACATTAAGATCATGTGGGAGAGAGGTCTTGGTTGTGACTTCACAATACAAGCGGAGAGTGGAGAGAGCTACTCAGCACACCGTGTGGTGTTAGCAGCAGGTGGGGACTATTTCCGGGCACTCCTCTGTGGAGGGTTACGGGAAACCAGTGAGGACATTGTGTGCCTGCGAGGCGTGGCATCCTGGGTCATTGAATCCATGCTAGGCTTCATCTACACGGGTCAGCTCAGAATGGGCTGGAGCCAGATTTGGGAGCTGACAGATGCACTGTGTCAGTTCCAGCTGCAGGAGGCGCTCTCACTGTGCATCGACTTCCTACGGGACAGAATGGATGAAAGCACCTGTCTGGATGTGCTGGTCCTAGCTGAGACCTATGCGCTGGTCCAGCTGGGGCAGGCTGCAGAGGAGTACATCCTAGCCCACTTCCAGTGCATCTCTGCTGGGGAGAAGTTCAAGGATGTCCCCTGTTCCTTCCTGGAGAAGATGCTTGAGAAGGACTCATTGTATGTAGAGAGTGAGATAGTGGTGTTCAGGGCAGTAGTTGACTGGGTGGAGGATAGCCCTAAAGAGAGACTACCAGTTCTGCCAGACCTGCTCCACCGTGTTCGTCTCCCCCTCCTCAGCTACTCTGAGCTCCAGGAGGCCCTAAGCTGCGGGCTCCTCTACAGGAGCCCAGGGGCCAGAGTATCACTGGAAGCTCTCCAAAGCCTCCTGGAGGAGGATTACACAGGGCCTGAGTGCCGACCTCGCAACCCAaaccaggttctggttctggtcggTGGGGACACTGTTGATGATGAATGTATGAAGATGGTTCCCAGCCAGACCTTGTGGTTCGCTCAGCAGTTCCACCGTGGACATGGTCTGATCAGAAGCATAGAGTGGAGGCCATTCACCAAGCTTCCTGAACCGCCCCGGTTCAGACACTGTGTCTGTCTCCTCAACAACAACCTTTATGTCCTGGGAGGACGCAAGTACTACGGAGCACTGGATATCCTTAAGTCTGccttgagGTTTGACCTGTCTCAGTGTAAATGGGAACGACTACCTGACATGCTGTGTCAAAGGGACTACTTTTCTGCTGTGTGTCTGGAAGGTAAGATCTTTGCTCTGGGTGGTAACTGTGACGACAGCCAATACCTGGATGCTGTGGAGTACTACACTCCTGAGGAGAACACCTGGAGgGGTAGTGAACCATGCTGTAACCCCCCCGATGGAATCCAGACACCGGTGGTGGCGGAGAAGGGCCAGAAGACCAGACCGAGGAGGCACTGGCGGGCGCACTCTCTGGACACAGCAGTGTGCAGCCACGCAGCAGCTGTTCTGGATGGACAGATTTACATCTCTGGAGGCTGTGACCGCCATCAGCACTGCCTTTCCTCTATGTGCCACTACCATCCTTCCCGTGGCTGTTCACCCAGAGCCCCCATGACTGTGGGAACGGGTCGTGCGGGCCATATCATGTTAGCCTTGGGCAGGGGTTTAGTGGTAGCTGGAGGGCTGCAGCCGCTCTGGATGGGCTTCGGAGACCAACTCTTCTGTGAGCTGTACAACACCACGCATGACTCCTGGTCATCCATCCCCGCCCTGCCTCGCCCTCATCTGTCACCAGGGGCAACTGTGCTTGGTGGACGGTTATACGTGGTGGGAGGGTCTTCAGCAAACACAGATACATCAAGGGATAACAAGGGGGTGCATCGCTATGATCCCATGGAGGGGTGCTGGGAAAACTTGGGGTCTATGCCACACCCATATACAAATCTGGCAGTTTGTTCCATGCCATTTCCTGAGTCTTTCATTTAAGCACTGGTTGATTTTGTTTCTGGCTCAGGTAAACCCAAGGAGCTTTAATAGATGTAATTATGTTGAAGCAACTCTAATATATAGCTAGATGTATAGTAGGTGCTACAGGACAACCAGGCCCTATTATATTTACATCAGAGACACATGATGTCATCAGAAATCATGCAATACAAACTTTGAGTTTGAAAGATGTGGGCAGGAAGGCTGGGAGGGTCGGATGCAGatggttgcattatgggaaatgtaggatccagtgtttttggagtTTTACCCATACTAAAAGTCAGGGTAATTTTGACCATGATTTCCATGTGTCTCTTGTGGGTCCCCCTACATTAAAATAATGCTGGACTGCCCCTTTAAACAATAAGGGTTAGgctacttttgtgtgtgtgagtttgtatatttttaaattgtgtttattttgtattctgaataATTCATTCTTGCTGTACTGGTCAAATGTAAAATTAGGTCAAAGCTATCTAAATGTGAACACCAGCAGAGCCCCAATTAAGTACAAAGGGAGATGTTGAATGAGACCTTGACCTGGTTAAACAATATATCGTGGCCATGTACGCCCCAGAGCAGCAATCAACGTCAAATTACATTTATGTAAATTCCAAGTATGTGAAATAATGTTTACCAGTTGACTCTCCAATACTTCAGTCAACCACAGCAATCCAAAATGATGCTCAACCAGTTCACACAAACCACAACAATGGGTTAGGCTTCTGATTTTCACAACAGTTTTGTCCTATTTATCTGTTCATAAACAGCTTCCTGTCGTCAGTCGACTAAAGTtagaatggtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
>XM_039821505.1
ATTGTGCCCTGGTCAAAGTCACTTGCTACACCCACACTGGTAGAGGAATTACTAAGGAAATGTCTGGTTGTCCGCATCGTGACAAGCAGGTGGGCCAAGTCTAAGTGGGTACAGCAAGACATTATGATGAGAAATAAAAAGtaggaaaaagaagaggaagagagaaaaggtAAAACAGATATGGATGATGTTAGGCAAACTCTCTATCAAAACCACCCTCTTCACCATCCCCCCTTAATTTCTCCAGAAGATCTCTTCTCTTACACCCTTCCCTCACACTCTGATACCCTCTTCACTCGCCTAAATAGCCTCAAGGAGGAAGATCTACTTCTGGACTGCATTTTCCCCCTCCAAGGCAAATCTTTCCAAGCTCACAGACTTGTTCTGGCAGCTGCCAGTCAAACCCCTGATGTATTTTTTGGCTCTAAACTCAAATGTGGGCTTGGAGTGGAGAATATAGCACATTGTTTGACCCCAGTTGGGTTAAGTGCTGTTCTGGACTTTGCGTACTGTGGAAATGTAGCCGTAGACTTGAGTAAGAAAGGGGTAATGGAGGAGGTGCTGCATGCTTGCAGGTTCCTAGAGATGGAGAGGTTGAGTCAAAGGTGCACGTCAAAAGTCAAAACCTCTGcggccacagagagagagaagagcttGGCTAACATTAAGATCATGTGGGAGAGAGGTCTTGGTTGTGACTTCACAATACAAGCGGAGAGTGGAGAGAGCTACTCAGCACACCGTGTGGTGTTAGCAGCAGGTGGGGACTATTTCCGGGCACTCCTCTGTGGAGGGTTACGGGAAACCAGTGAGGACATTGTGTGCCTGCGAGGCGTGGCATCCTGGGTCATTGAATCCATGCTAGGCTTCATCTACACGGGTCAGCTCAGAATGGGCTGGAGCCAGATTTGGGAGCTGACAGATGCACTGTGTCAGTTCCAGCTGCAGGAGGCGCTCTCACTGTGCATCGACTTCCTACGGGACAGAATGGATGAAAGCACCTGTCTGGATGTGCTGGTCCTAGCTGAGACCTATGCGCTGGTCCAGCTGGGGCAGGCTGCAGAGGAGTACATCCTAGCCCACTTCCAGTGCATCTCTGCTGGGGAGAAGTTCAAGGATGTCCCCTGTTCCTTCCTGGAGAAGATGCTTGAGAAGGACTCATTGTATGTAGAGAGTGAGATAGTGGTGTTCAGGGCAGTAGTTGACTGGGTGGAGGATAGCCCTAAAGAGAGACTACCAGTTCTGCCAGACCTGCTCCACCGTGTTCGTCTCCCCCTCCTCAGCTACTCTGAGCTCCAGGAGGCCCTAAGCTGCGGGCTCCTCTACAGGAGCCCAGGGGCCAGAGTATCACTGGAAGCTCTCCAAAGCCTCCTGGAGGAGGATTACACAGGGCCTGAGTGCCGACCTCGCAACCCAaaccaggttctggttctggtcggTGGGGACACTGTTGATGATGAATGTATGAAGATGGTTCCCAGCCAGACCTTGTGGTTCGCTCAGCAGTTCCACCGTGGACATGGTCTGATCAGAAGCATAGAGTGGAGGCCATTCACCAAGCTTCCTGAACCGCCCCGGTTCAGACACTGTGTCTGTCTCCTCAACAACAACCTTTATGTCCTGGGAGGACGCAAGTACTACGGAGCACTGGATATCCTTAAGTCTGccttgagGTTTGACCTGTCTCAGTGTAAATGGGAACGACTACCTGACATGCTGTGTCAAAGGGACTACTTTTCTGCTGTGTGTCTGGAAGGTAAGATCTTTGCTCTGGGTGGTAACTGTGACGACAGCCAATACCTGGATGCTGTGGAGTACTACACTCCTGAGGAGAACACCTGGAGGCGGGCGCACTCTCTGGACACAGCAGTGTGCAGCCACGCAGCAGCTGTTCTGGATGGACAGATTTACATCTCTGGAGGCTGTGACCGCCATCAGCACTGCCTTTCCTCTATGTGCCACTACCATCCTTCCCGTGGCTGTTCACCCAGAGCCCCCATGACTGTGGGAACGGGTCGTGCGGGCCATATCATGTTAGCCTTGGGCAGGGGTTTAGTGGTAGCTGGAGGGCTGCAGCCGCTCTGGATGGGCTTCGGAGACCAACTCTTCTGTGAGCTGTACAACACCACGCATGACTCCTGGTCATCCATCCCCGCCCTGCCTCGCCCTCATCTGTCACCAGGGGCAACTGTGCTTGGTGGACGGTTATACGTGGTGGGAGGGTCTTCAGCAAACACAGATACATCAAGGGATAACAAGGGGGTGCATCGCTATGATCCCATGGAGGGGTGCTGGGAAAACTTGGGGTCTATGCCACACCCATATACAAATCTGGCAGTTTGTTCCATGCCATTTCCTGAGTCTTTCATTTAAGCACTGGTTGATTTTGTTTCTGGCTCAGGTAAACCCAAGGAGCTTTAATAGATGTAATTATGTTGAAGCAACTCTAATATATAGCTAGATGTATAGTAGGTGCTACAGGACAACCAGGCCCTATTATATTTACATCAGAGACACATGATGTCATCAGAAATCATGCAATACAAACTTTGAGTTTGAAAGATGTGGGCAGGAAGGCTGGGAGGGTCGGATGCAGatggttgcattatgggaaatgtaggatccagtgtttttggagtTTTACCCATACTAAAAGTCAGGGTAATTTTGACCATGATTTCCATGTGTCTCTTGTGGGTCCCCCTACATTAAAATAATGCTGGACTGCCCCTTTAAACAATAAGGGTTAGgctacttttgtgtgtgtgagtttgtatatttttaaattgtgtttattttgtattctgaataATTCATTCTTGCTGTACTGGTCAAATGTAAAATTAGGTCAAAGCTATCTAAATGTGAACACCAGCAGAGCCCCAATTAAGTACAAAGGGAGATGTTGAATGAGACCTTGACCTGGTTAAACAATATATCGTGGCCATGTACGCCCCAGAGCAGCAATCAACGTCAAATTACATTTATGTAAATTCCAAGTATGTGAAATAATGTTTACCAGTTGACTCTCCAATACTTCAGTCAACCACAGCAATCCAAAATGATGCTCAACCAGTTCACACAAACCACAACAATGGGTTAGGCTTCTGATTTTCACAACAGTTTTGTCCTATTTATCTGTTCATAAACAGCTTCCTGTCGTCAGTCGACTAAAGTtagaatggtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039821504.1 True 3344 mRNA 0.49 8 19880340 19894923
XM_039821505.1 False 3254 mRNA 0.49 7 19880340 19894923

Neighbor

gene id symbol gene type direction distance location
arhgef11 arhgef11 coding downstream 178117 19679255 ~ 19702223 (-)
LOC120573581 LOC103480354,LOC103144605,LOC104935705,LOC104965865 coding downstream 202718 19667699 ~ 19677622 (-)
LOC120572523 NA coding downstream 292263 19587130 ~ 19588077 (-)
LOC120572473 NA coding downstream 326499 19529160 ~ 19553841 (-)
LOC120572474 NA coding downstream 356350 19512028 ~ 19523990 (-)
cbln11 NA coding upstream 169873 20064796 ~ 20070624 (-)
LOC120572528 NA coding upstream 185818 20080741 ~ 20085137 (-)
si:ch211-63p21.1 LOC103371025,LOC102193822,LOC102788031,LOC101475184,LOC100709095 coding upstream 192524 20087447 ~ 20093439 (-)
LOC120572322 NA coding upstream 273116 20168039 ~ 20173402 (-)
LOC120573477 NA coding upstream 348606 20243529 ~ 20244965 (-)
G144776 LOC104967121 non-coding downstream 713 19877674 ~ 19879627 (-)
G144735 NA non-coding downstream 64999 19716984 ~ 19815341 (-)
LOC120573677 NA non-coding downstream 124618 19755220 ~ 19755722 (-)
LOC120573678 NA non-coding downstream 133515 19746505 ~ 19746825 (-)
LOC120573676 NA non-coding downstream 137559 19739358 ~ 19742781 (-)
LOC120572271 NA non-coding upstream 33594 19928517 ~ 19932978 (-)
G144797 NA non-coding upstream 93651 19988574 ~ 20039742 (-)
G144803 NA non-coding upstream 119525 20014448 ~ 20016488 (-)
G144816 NA non-coding upstream 166887 20061810 ~ 20062338 (-)
G144819 NA non-coding upstream 172157 20067080 ~ 20068405 (-)
G144730 LOC100695354,LOC106632790,LOC105940461,LOC104965881,LOC101481059,LOC106632521,LOC103369240,LOC102791106 other downstream 82810 19776680 ~ 19797530 (-)
si:cabz01074946.1 NA other downstream 214548 19657083 ~ 19665792 (-)
LOC120572670 NA other downstream 527034 19282933 ~ 19353306 (-)
prkd4 LOC103376196 other downstream 613987 19247950 ~ 19266353 (-)
clcn3 clcn3 other downstream 823558 18962866 ~ 19056782 (-)
LOC120573300 slc12a6 other upstream 932360 20827283 ~ 20863889 (-)
nop10 NA other upstream 969834 20864757 ~ 20867106 (-)
LOC120573168 LOC103355779 other upstream 1011532 20906455 ~ 20929559 (-)
si:dkey-172j4.3 LOC102306481,LOC103363024,LOC100708735,LOC101468909,LOC102781820,LOC101073787,LOC108246481,LOC106609052 other upstream 1456319 21351242 ~ 21438456 (-)
G145209 NA other upstream 1508932 21403855 ~ 21434195 (-)

Expression


Co-expression Network