LOC120572332


Basic Information

Item Value
gene id LOC120572332
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 5418473 ~ 5423102 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039821606.1
agctgctagcatggctgtagactcttagtctaGTTTTTATTAGCTTATCACTCAACTAACTAATCTGTCTCCATACCTTGGCTACACATCTACTTCCCAGCTTTACACAAAAATAATACACACGGCTCTAGctagagaaaggagagagaaggggaatggaAATGGTAAATAAAATCATGTGATGGTTGACACTTTGCCGCATAATTGGAGCGCTGAAAACAAACTTTGATTTGAGGCACCTTCATTCAGGGACTACGGTCATCAGGCATTTGTAGCTTCACGTCACCGGCTTGACTACAAGTCTACAAGTCATTGAAAATGACTTGTAGACAGGAGATTACAGGTACAAATGATAATGCTTCACAACAGGTAGACCTGCAAGTGTTCTCTGAATAACAGACAGGATTAAATCAAAGTAACGGTGGTAATGAAAAGTGAAAGCATGTTGTATCATTGTTATGAAAGGGCTGGCACGCTGTGGTTAACACATGAGCATGCTGTGCAGACAAGGTAAATGCCACAGACAATCTTAACATTTCCTGTTTTGTTCTTGTGGCTGACACATCTTCACTTTACTGTTAAGAGGACAGACAATTTTCCCACACAAATATTTTATCTTTTTGCGCTGAGAGGACAAAACATAGCTACCGAGAGCAAAGGAAGACTGCGTTGTAACATCATCATATAGAAAACCAGAactcaatattgaaatcatccTATAGATAATCAGATTTGAACtattttttctactatttttcAGTCTTTTCGGCCAGAATGTTGCACCACCTTGGTGATTTTCCTCAAGGATTGATCAAACTCATTACAAAGTCTGTGGGCATTTTCCTGCTCATAGCCCTCTTCTTCATTCTGCAGTACTTATTCGATATGGATTTTCGTTGCTCATGCAGACCAGGTGTACATCTAAATGATGGAGTGTTCATGGCTGCCCCTCCTTTGATCCTCATCTCGATGGTCACCTTAATTGAGTCCGTCTACCAAATGGGGATGTTTTGTCGCAGCTGTAATTATTTTGTCAACAATTTCTGCACCTCTTTTGTGAAGTTTTGGATGAAATATCTTTTTCTGACTGCTGTTTGGGGGTCCACGGTTCTGTTTGATGGAGATTGGTACTTCTGCCTGCAAACAAACCTCAATAGCTCCCAGACCGGGATTCCTTGCAAGACAAATCAGACCTACGAGGAGACACTCATCGAAGCTGATTATAAGATTAAATCACGTGTCATTGGTTTCGGTGTAATCTCTGGAATTCTTTTGCTTTGGATCATCTTTGATTTTATAAAAGCCTGCCATATTAGAATGAGTATGTGGAAAAGGAGCTCTGTGTCTCGATACAACCTGTGTTGCCCTCCCTACTACAGATGGGTTTATGAAGGTCTTCTGTCAGAGGAGGTGAGCAGTCTTTTGAAAGACGAGCTAAGAAGAATAGCAAAAGAAAGAGCAGAACAACTCTGTAGAGGACATATTACGACTATTCATAGACACGAGACGCAGGGACAAAACCCAGATGGCAGGACTGTTCCCGACACAAATGCAGGTGGTGGCAGTGGCCATCCCACTGAAAAGAAAGATGACAGCACTGGTGAAATCAGTGGAGATCCCAATAGACCTCTCATTCGTGATAGTGAAAATAATGAGCAAGATAATATTTTTGATACCTGGCAGACAATTTCACTCTCCTCTTTCTACCTGTTGGATGAGGGGTTTGAGCAGGACAATTCATGAAGGGAGATTGATTCTGATGAGCAACAACTGTATTATATTGCCATAACCTATCAAACAATGTCACGGATCTAGTGCCTTCAAGAAACAAGCCAGTAAAAAAGGTACACTGTCATGTTTTTATAGCAGGGCCATGGAGCAATGATAGGTTTGTAAATTCTTTCCAAAGTAAACAttgaaaataactgaaaataatgTGTACATAATAACCAATCCATCATAAAACATGtgtacaaaatataataaatgatgatgtatttTCATGGAGTAGTTAGAATGACCCAGCTGCAGCATTACATGACAATTATTGCTTGCACATAAATGCacctataatatataatataatcataCCAACTATTTAATGTACGTTATCTGAAATAATAATATCTTTTTTCTTCAGGTTTTTATATTGTTCTGTATCTTC
>XM_039821607.1
CAGATGATCACACTCAGAATTACTCAGACTGGGACTGTCAGACAAAAGGGGACTCAGAATGCAGGATTTAGACACGCAGTTAAAGTCACAAAAGGGAGTTTATCGTACAAAAGCGGTACAAAGATCAAGCAATGGTTATCCAAAACACAATACAGAGGCTGGGTCAAAACAGGCACCGGTCGAAAAGGTAACTTTTGTCAAAAAACAGGCAGAATGGTCAGAACAAACACTTACTAGAAACGGGGAATGCAACACACGAGTGTAGAAATTAAACTGGCACTGAATAAAGGGAAAAGGAGTGCATATATAGCTTActtgaggggggagggggagacaaTTAGACACAGGTGCAGGACATTTGTGCAGGCCAGGTGAACACACAAGACGGGAAGGCAGACGAGACCAGAAGGAAAGCGACCTGCAACAGAAACAAACGTACTTATTCGATATGGATTTTCGTTGCTCATGCAGACCAGGTGTACATCTAAATGATGGAGTGTTCATGGCTGCCCCTCCTTTGATCCTCATCTCGATGGTCACCTTAATTGAGTCCGTCTACCAAATGGGGATGTTTTGTCGCAGCTGTAATTATTTTGTCAACAATTTCTGCACCTCTTTTGTGAAGTTTTGGATGAAATATCTTTTTCTGACTGCTGTTTGGGGGTCCACGGTTCTGTTTGATGGAGATTGGTACTTCTGCCTGCAAACAAACCTCAATAGCTCCCAGACCGGGATTCCTTGCAAGACAAATCAGACCTACGAGGAGACACTCATCGAAGCTGATTATAAGATTAAATCACGTGTCATTGGTTTCGGTGTAATCTCTGGAATTCTTTTGCTTTGGATCATCTTTGATTTTATAAAAGCCTGCCATATTAGAATGAGTATGTGGAAAAGGAGCTCTGTGTCTCGATACAACCTGTGTTGCCCTCCCTACTACAGATGGGTTTATGAAGGTCTTCTGTCAGAGGAGGTGAGCAGTCTTTTGAAAGACGAGCTAAGAAGAATAGCAAAAGAAAGAGCAGAACAACTCTGTAGAGGACATATTACGACTATTCATAGACACGAGACGCAGGGACAAAACCCAGATGGCAGGACTGTTCCCGACACAAATGCAGGTGGTGGCAGTGGCCATCCCACTGAAAAGAAAGATGACAGCACTGGTGAAATCAGTGGAGATCCCAATAGACCTCTCATTCGTGATAGTGAAAATAATGAGCAAGATAATATTTTTGATACCTGGCAGACAATTTCACTCTCCTCTTTCTACCTGTTGGATGAGGGGTTTGAGCAGGACAATTCATGAAGGGAGATTGATTCTGATGAGCAACAACTGTATTATATTGCCATAACCTATCAAACAATGTCACGGATCTAGTGCCTTCAAGAAACAAGCCAGTAAAAAAGGTACACTGTCATGTTTTTATAGCAGGGCCATGGAGCAATGATAGGTTTGTAAATTCTTTCCAAAGTAAACAttgaaaataactgaaaataatgTGTACATAATAACCAATCCATCATAAAACATGtgtacaaaatataataaatgatgatgtatttTCATGGAGTAGTTAGAATGACCCAGCTGCAGCATTACATGACAATTATTGCTTGCACATAAATGCacctataatatataatataatcataCCAACTATTTAATGTACGTTATCTGAAATAATAATATCTTTTTTCTTCAGGTTTTTATATTGTTCTGTATCTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039821606.1 True 2164 mRNA 0.39 2 5418473 5421625
XM_039821607.1 False 1727 mRNA 0.41 3 5418473 5423102

Neighbor

gene id symbol gene type direction distance location
LOC120573316 acox3 coding downstream 82756 5319797 ~ 5335717 (-)
LOC120573313 acox3 coding downstream 173516 5213138 ~ 5244957 (-)
znf16l LOC103362116,LOC104940792,LOC101479721 coding downstream 299146 5114994 ~ 5119327 (-)
sstr1b LOC104956125,LOC103370120,LOC106577512 coding downstream 334082 5038118 ~ 5084391 (-)
ecsit NA coding downstream 890461 4518376 ~ 4528012 (-)
med11 med11,LOC102785859 coding upstream 193575 5616677 ~ 5620265 (-)
rnaseka LOC101070669,LOC104937157,LOC103362101 coding upstream 255114 5678216 ~ 5684661 (-)
si:dkey-6n21.13 LOC104944656,LOC104937154,LOC102297111 coding upstream 304534 5727636 ~ 5735182 (-)
si:dkey-6n21.12 LOC102198682,LOC106632892,LOC104937153,LOC101478675 coding upstream 318219 5741321 ~ 5757820 (-)
ache ache coding upstream 361706 5784808 ~ 5821779 (-)
G141259 NA non-coding downstream 210013 5208237 ~ 5208460 (-)
G141233 LOC104947167 non-coding downstream 340257 5077628 ~ 5078216 (-)
G141224 NA non-coding downstream 382276 5035502 ~ 5036197 (-)
G141222 NA non-coding downstream 395388 5022593 ~ 5023085 (-)
G141214 NA non-coding downstream 470494 4944049 ~ 4947979 (-)
G141394 NA non-coding upstream 161060 5584162 ~ 5584526 (-)
G141416 NA non-coding upstream 288332 5711434 ~ 5711716 (-)
G141467 NA non-coding upstream 546849 5969951 ~ 5970613 (-)
G141468 NA non-coding upstream 547833 5970935 ~ 5971387 (-)
G141470 NA non-coding upstream 566793 5989895 ~ 5992227 (-)
G141234 NA other downstream 318391 5099705 ~ 5100082 (-)
G141219 NA other downstream 458468 4958679 ~ 4960005 (-)
peli3 LOC100695529,LOC102800049,LOC102202559,LOC103148873,LOC106956141,LOC107098130,LOC103480122 other downstream 589311 4773628 ~ 4829162 (-)
G141145 NA other downstream 754275 4641495 ~ 4664198 (-)
nat16 nat16 other upstream 1459 5424561 ~ 5475155 (-)
cd99l2 cd99l2 other upstream 136924 5560026 ~ 5582995 (-)
G141400 NA other upstream 173856 5596958 ~ 5600462 (-)
G141439 NA other upstream 320457 5743559 ~ 5843146 (-)
gal3st4 gal3st4,LOC104939968 other upstream 754819 6177921 ~ 6220260 (-)

Expression


Co-expression Network