LOC120572388


Basic Information

Item Value
gene id LOC120572388
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 8497257 ~ 8502220 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039821686.1
ctagggtgaattactccgaaccatcactttaacacagCAGTGGTCATCACCAAGCTATCAACTTGCAATGGTTTTTGGTGACAGCATTTCTATTGTGACTGTGAGCAGCCGGGTAGACAAACTAAAGATCAGCCCGCCCCTCTTTACGGTGAGACTTCTCTTACTGGAGCACAGTTCACTTCCAGGCGTTGAAGTGGTGCAGACATACTGTTCACACAAAGATGAAGCTCGCCTCGATAACAGCTTTGCTCTGCACCTTCAGTTtgatctctgtctgtgtttctgagtTCCACACTGTGGAGCTCCAGCCTGCTGAACAAGTCACACTGATGTGCTCCAACTTCAGCAGCATTATTACACACATGTTCTGGTTCAGACTGGACAGCAGACCCAACATCAGCCGTATCTCCTCTATGCTGACCTCTGATTCAAATGCTTCACTCTACGATGGATTTCAAAATGGAAAATTTAACATGACATCCAACACCACTACCCTCTTCCTCAACATCACCCATGTGGATTTAGCTGACTCTGGACTGTATTTCTGTGGATGTTACTCAAATAATTACTCAGTAATTGTTAGTGCAACATATCTAAAAGTTCAAGAAGTGTTTGATGGAATAACGAGCCTGACCAGTGTGATCCTCCTTGGTCTGATTCTTTTCCTCGTTCCAGTCGTCATTGGTCTGGTTGTCAAAATCAGCAAACTTTGCACAGCTCAGAAAGAGGGACAGACTCCACAACGCAGCGAGAACCTGGGCTCTGATGCCCTGAACTATGCAGCGCTCAGTTTCCATCCAGAAGCAAGAAGCAGCAGAAGGCCTGAATCAGAGAACCAGCTGGAGACAGATGTTGTGTATGCTGCCACCAGATAGA
>XM_039821687.1
TGCAGCTATCAACTTGCAATGGTTTTTGGTGACAGCATTTCTATTGTGACTGTGAGCAGCCGGGTAGACAAACTAAAGATCAGCCCGCCCCTCTTTACGGTGAGACTTCTCTTACTGGAGCACAGTTCACTTCCAGGCGTTGAAGTGGTGCAGACATACTGTTCACACAAAGATGAAGCTCGCCTCGATAACAGCTTTGCTCTGCACCTTCAGTTtgatctctgtctgtgtttctgagtTCCACACTGTGGAGCTCCAGCCTGCTGAACAAGTCACACTGATGTGCTCCAACTTCAGCAGCATTATTACACACATGTTCTGGTTCAGACTGGACAGCAGACCCAACATCAGCCGTATCTCCTCTATGCTGACCTCTGATTCAAATGCTTCACTCTACGATGGATTTCAAAATGGAAAATTTAACATGACATCCAACACCACTACCCTCTTCCTCAACATCACCCATGTGGATTTAGCTGACTCTGGACTGTATTTCTGTGGATGTTACTCAAATAATTACTCAGTAATTGTTAGTGCAACATATCTAAAAGTTCAAGAAGTGTTTGATGGAATAACGAGCCTGACCAGTGTGATCCTCCTTGGTCTGATTCTTTTCCTCGTTCCAGTCGTCATTGGTCTGGTTGTCAAAATCAGCAAACTTTGCACAGCTCAGAAAGAGGGACAGACTCCACAACGCAGCGAGAACCTGGGCTCTGATGCCCTGAACTATGCAGCGCTCAGTTTCCATCCAGAAGCAAGAAGCAGCAGAAGGCCTGAATCAGAGAACCAGCTGGAGACAGATGTTGTGTATGCTGCCACCAGATAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039821686.1 True 876 mRNA 0.46 6 8497257 8502220
XM_039821687.1 False 827 mRNA 0.46 5 8500943 8502220

Neighbor

gene id symbol gene type direction distance location
LOC120572394 NA coding upstream 49512 8445286 ~ 8447745 (+)
LOC120572377 NA coding upstream 88385 8406907 ~ 8408872 (+)
LOC120573544 NA coding upstream 126437 8368140 ~ 8370820 (+)
LOC120572387 NA coding upstream 171681 8323775 ~ 8325576 (+)
LOC120573542 NA coding upstream 182489 8305985 ~ 8314768 (+)
LOC120573551 NA coding downstream 67858 8570078 ~ 8571491 (+)
LOC120572362 NA coding downstream 104745 8606965 ~ 8611199 (+)
LOC120572378 NA coding downstream 130560 8632780 ~ 8636310 (+)
LOC120572371 NA coding downstream 147004 8649224 ~ 8651266 (+)
LOC120572373 NA coding downstream 157513 8659733 ~ 8662405 (+)
LOC120572409 NA non-coding upstream 20426 8476414 ~ 8476831 (+)
LOC120572410 NA non-coding upstream 27688 8468699 ~ 8469569 (+)
G141967 NA non-coding upstream 298082 8198847 ~ 8199175 (+)
LOC120572404 NA non-coding upstream 411937 8083438 ~ 8085320 (+)
LOC120572412 NA non-coding upstream 423267 8069786 ~ 8073990 (+)
LOC120572403 NA non-coding downstream 150632 8652852 ~ 8689678 (+)
G142057 NA non-coding downstream 253010 8755230 ~ 8755493 (+)
G142156 NA non-coding downstream 489703 8991923 ~ 9005284 (+)
G142161 NA non-coding downstream 514778 9016998 ~ 9017210 (+)
G142203 NA non-coding downstream 695317 9197537 ~ 9203445 (+)
LOC120572397 NA other upstream 711 8452933 ~ 8496546 (+)
LOC120573548 NA other upstream 83923 8412679 ~ 8413334 (+)
LOC120573547 NA other upstream 96718 8390815 ~ 8400539 (+)
LOC120572385 NA other upstream 436779 8057655 ~ 8060478 (+)
LOC120572330 LOC107104736,LOC106920517,LOC103140598,LOC106947113 other upstream 499549 7990198 ~ 7997708 (+)
LOC120572401 NA other downstream 112070 8614290 ~ 8616191 (+)
LOC120572381 NA other downstream 244400 8746620 ~ 8748900 (+)
tmem88b tmem88,LOC104964151,LOC103375639,LOC102237254 other downstream 2012017 10514237 ~ 10523748 (+)
LOC120573689 NA other downstream 2196064 10698284 ~ 10705325 (+)
zgc:101765 LOC104948199,LOC103360918 other downstream 2665186 11167406 ~ 11177041 (+)

Expression


Co-expression Network