LOC120572394


Basic Information

Item Value
gene id LOC120572394
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 8445286 ~ 8447745 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039821695.1
TGCACAACATAAGTTCTTCAAGCCCTCTAGCGTGCAATGGTGGGAAGCGAGATGACCCCTTCTGTACAAAAACACCACAGTGGACACGTACCATGAGTGTGAATTTGGTCGCCAGTCAGATCGTGTACAGTGGGCATACAGCCATTAGTGACTTGCTGCTTAACTTAATAGGAAATGACCAAGAATAACTTGGTCTGGTATCTGTTGAGGCGATCATTTGTTGTGAAAGACTCCACCTCTGAAgttgagagcagccttcctggagcACAGTTAGACATCACAGAGCTGTGATCATACGCACCACGATGAAACGGAGCCTGATAACAGCTTTAATTCTTTGCAGCATCAgcTGGATCTTTGTCTCAGGTTCTGAGTCTCACACTGAGACTGTGGAGGGTCGGCCGGGTGGAGAAGTCACACTCACATGCTCTAACACGTCCAACCGAGACACTGCAACACTCTGGTTTAGAGTGGTCAACAGAACCAAGGCCAGCTGGATCTCCACGATGATCAGGTCTACAGGAAAACCTTTATACAGTGATGGAATTCAAAATGGAAGATTCAACATGAGTACCAACATCTCCACTCTCTTTCTCCAAATCAAACGTGTGGATGTATCTGACTCTGGACTGTATTTATGTGGATTTTACATCAGAGGACCTTTTCATTTCAGCGCAATACACTTAAATGTTAATGTGATGATTCTCATGATGACGCTGACAGGAAGTCTGAAATCTGATGGAACAGCAAAGCTGATGAGTTTGATCCTGGGAGCTCTGACTGTTCTCCTCTTAATGGTCATCATTGGTCTGGTTGTTAAAAACAGGAAACTTCAGAAAGCTGCCAATGAAGAACAGAATCCACAACAGCCTGAGAACCGGGCCTCTGAAGAGCTGAACTACGCAGCTGTGGCTTTCCGtccaaaaacaagaaaaacaagagaAGTGGAGCCCAATGTTGTGTATGCTTCTACTAGATAGACTCAGGATGAAACCAGAGAAGACGTTCAGAATAAAACTGATGCTTTATCATATTCATCTGCAGATGGTGGACAGGAGGACTGACCATCACTTTGTCAAAAGAAGGACAAAAGATGTGCAACCTTCTTCCTAGTGCCGAGTTTGAATTTGAATCTCTTTTAAATATGTAATTAGTGCACATCAATACAGAAAGAAGATTTTGTAAATGCTGACTTGATAGCAGTGTGTCTATGCTGGTATGGGGAATACAATTCAAGAGATACAGCAGCAATCCAGTTTCAcatttgacttaaaaaaaattaactactcgcttttcttttttctttcctttctctatTTGTCTCTATGCAGCACCTAAAACTGAAAAAACTCAAATATACATTGCGTGTTTCCGTTGAAACATTTTGTAAGACTTGGCAACCCTTCATTTATATAGTAGAAGCTAGGCAATACATACTTTATCCCCTTGGCTCCTCCCTTAACTCTTAGGTCTGAGAACTACCTGAGGTCTGATGTCAATAAGTATGTGGAGCAGCTTTGTACTTATTATCTAATCTGATTATCTACAGTAcagagggctatttcacaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039821695.1 True 1570 mRNA 0.42 6 8445286 8447745

Neighbor

gene id symbol gene type direction distance location
LOC120572377 NA coding upstream 36414 8406907 ~ 8408872 (+)
LOC120573544 NA coding upstream 74466 8368140 ~ 8370820 (+)
LOC120572387 NA coding upstream 119710 8323775 ~ 8325576 (+)
LOC120573542 NA coding upstream 130518 8305985 ~ 8314768 (+)
LOC120572361 NA coding upstream 424405 8019236 ~ 8020881 (+)
LOC120572388 NA coding downstream 49512 8497257 ~ 8502220 (+)
LOC120573551 NA coding downstream 122333 8570078 ~ 8571491 (+)
LOC120572362 NA coding downstream 159220 8606965 ~ 8611199 (+)
LOC120572378 NA coding downstream 185035 8632780 ~ 8636310 (+)
LOC120572371 NA coding downstream 201479 8649224 ~ 8651266 (+)
G141967 NA non-coding upstream 246111 8198847 ~ 8199175 (+)
LOC120572404 NA non-coding upstream 359966 8083438 ~ 8085320 (+)
LOC120572412 NA non-coding upstream 371296 8069786 ~ 8073990 (+)
G141943 NA non-coding upstream 383425 8061399 ~ 8061861 (+)
G141942 NA non-coding upstream 383993 8061059 ~ 8061293 (+)
LOC120572410 NA non-coding downstream 20954 8468699 ~ 8469569 (+)
LOC120572409 NA non-coding downstream 28669 8476414 ~ 8476831 (+)
LOC120572403 NA non-coding downstream 205107 8652852 ~ 8689678 (+)
G142057 NA non-coding downstream 307485 8755230 ~ 8755493 (+)
G142156 NA non-coding downstream 544178 8991923 ~ 9005284 (+)
LOC120573548 NA other upstream 31952 8412679 ~ 8413334 (+)
LOC120573547 NA other upstream 44747 8390815 ~ 8400539 (+)
LOC120572385 NA other upstream 384808 8057655 ~ 8060478 (+)
LOC120572330 LOC107104736,LOC106920517,LOC103140598,LOC106947113 other upstream 447578 7990198 ~ 7997708 (+)
LOC120573538 NA other upstream 723630 7716604 ~ 7721656 (+)
LOC120572397 NA other downstream 5188 8452933 ~ 8496546 (+)
LOC120572401 NA other downstream 166545 8614290 ~ 8616191 (+)
LOC120572381 NA other downstream 298875 8746620 ~ 8748900 (+)
tmem88b tmem88,LOC104964151,LOC103375639,LOC102237254 other downstream 2066492 10514237 ~ 10523748 (+)
LOC120573689 NA other downstream 2250539 10698284 ~ 10705325 (+)

Expression


Co-expression Network