LOC120572528


Basic Information

Item Value
gene id LOC120572528
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 20080741 ~ 20085137 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039821862.1
ATGGCAGTAGAAGTTAATCAATGCCTCCTGAGCTGGGATGAGTGGAGGAGAGAAGTgctggagaagaggaggagggtcaGTCTCTTTGAGAGGGAAGTTATAGAGAATGGGGAGTTGAATGAGATAAAGGATGAGGCACGAGCTGTTGAGAAACAATATAAGGATCCCGAAGAACGGGAAGATCCTGATGAAAAGTTGAGGAAGAATGAAAATAGCATCCTAGGACCGTCAACTTCTAAGGAAcgaaaagaagaggaagatgaaAGTAAGAAATTGACAAATGAGAAAGAAGCAGCCGCATCTCGGACAACTCAAGAAGAAGAGTTTCAAGATCGTCACAAAAAGTTTCAAAAGAAAAAGCCTACAGATGATGATGAGGAAGCAGAACATTCAATGGATGAAGAAGCAGATAGTAATGACGAAGATGTGGTGAAGATTTACTTCAAAGATGATTATCACACGGACATATTCCGCAACTTGACAGAGTTCAGGGACTCTTCCCTTCTCACTGACCTTACTTTGAGCACAGAGGATAGGGGGATATTCCACGTACACTCCCCTGTTCTGGCTGCTGTCAGCTCCCATATCCGAGAAGGTCTTAGTAGATGTAATGTAGGTAACGATACAGGTGATGAAAGAAAATATACAAGTGTTGGAGTACACAGGTGGTCATTGTCTATGGATCCAGAAGTGGATGATATTGGATTAAAGGCAGTTGTGGAGTTTGCCTACACTGGACTCATATCATGTTTGAACAAGAACACTGTGCACCAGATTAAGGCTGCGGCTCAAACATTGGGCGCCCCCAGGGTGCTGGATCTCTGcaatgaggaggaggaaaagtcCACAAAAACtgtagaaaagaagaaaaagaaaagcctcTCAGCTGCAGAACAAATGATGGTCAGTCTTCAGGCCATCAAACAGCTGTGGATGGACAGAGTGGGCTGTGATGTCATTCTAGAAGCTCTCGGAGGATCACTTCATGTTTTGGCTGTGTGCAGTGACTACTTCCGTGGGATGTTCACCTTGGGGATGAGGGAGTCCCATCAGCCCTGTGTGACCCTTCCCTTCCTTTTGGCTTCAGAGCTGGAGGTTCTAATTGACAGCTCCTACACTGGGGCTCTCCCCCTCAGCTGGAAGTATGTCTTTGAGATCACCAGCACTGCTCTCCAGCTCCAGTATCAACCCGCCCTCTCCTTGTGCCTTAACTTCCTGCCTCAAGAAATAAATCCTCTCTCCTGTCTGGATTTGGCATCTTTTGCTGAGGCCTACGAGATGGCTCAGCTTCTTGAAGTTGCAGACGATTATTTCCTGCGTCAATTCCAAAAGGTGGCATGCACCTCAAAGTTCATGGACCTGCCAGCCAAACAGCTCCTGAAGTACCTGAACAGTCGTTCACTCTGTATTCCATCCGAGCTTGTtttattcagagcagtggtgGCATGGATCCAAGCAAAACCCAAATTAAGGCTGAAGTTTGctaaaaaactaatgaaaactATCCACTTTTCCCTGATGACGTCCAAGGAATTCAAAGAGGTCCAATCTCTGAGAATGTGGTCTGATCACAGCCTGGCAAAGCTCTATAAAGCAGTTTTTAAGGATTTCTGCTCCAATGAAAGTCAGTGTCGGACCTATTTGCCGAAAGAGAGTCTGGTCTTGATTGGAGGTGACCAGAACTCTGGAGACAGCCGCAGAATCAGCAGAGAACTCTGGTTCGGGAATTCCTTAAGGAACTATAAATGGGGGGAAAAGGCCATGGAGTGGAGAAAGTTAGGAGAGATGCCAGAGCCAGAGAGGTTCAGTCATGAGGTGGCTGTCCTCAAAGGACAACTATACGTGTTTGGAGGCAAGAAGTATTATGGCATTAGCGACAGCATGAATTCTGTTTACAGGTATGACCCCTTTCAAAACAACTGGGAGAGCCTGGCTGAAATGCAACAAAAGAGATACTCTTTCTCTGTGGTTGTGCTGGACGGAAAGATATATGCCATTGGCGGACATTGTGACAATGAATATATAGAGAGTGTGGAATGCTTCTGCCCCACTGGAAACTCTTGGAACTTCACGTGGCCCTTGGATCTGCCTCTGGGGGGCCATGTAGCAAACGTTTCACAAGGGCGGATCTTTGTCTCAGGAGGGTTGAGCAGCCACCACCAATTTCTTTCATCTATGTTTCTTTACCACCCAGAGACAGGAAGCACTTATTTGGCAAATATGGCCAAACCTCGAGCATGTCACTGCATGGAGACCCTGGGTGAATGTCTTTATGTAGCAGGTGGATTCACTGCAGCTGATGACATGAGTTTTGTTGACCAGCTAGCCTGTGAAGTGTACAATCCAGTGGATGACTCCTGGACTGCCTTCACACCTCTGCCAGTGCCACATGTAGGAGCAGGAGGTGCTGTTTTGGAGGGAAAGTTTTATGTGCTGGGTGGATACAGCCAGGAGGACCACCGTGACACTAAGCTGGTCCATCGTTATGATCCCACCACACAGAGCTGGGAGAACATGGGTAAGATGCCAGGGCCGAACAATGACATACGAGCAACTGTGCTGTATTTGCCACCACAATTCCGATTGTAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039821862.1 True 2590 mRNA 0.47 4 20080741 20085137

Neighbor

gene id symbol gene type direction distance location
cbln11 NA coding downstream 10117 20064796 ~ 20070624 (-)
LOC120572266 NA coding downstream 185818 19880340 ~ 19894923 (-)
arhgef11 arhgef11 coding downstream 378518 19679255 ~ 19702223 (-)
LOC120573581 LOC103480354,LOC103144605,LOC104935705,LOC104965865 coding downstream 403119 19667699 ~ 19677622 (-)
LOC120572523 NA coding downstream 492664 19587130 ~ 19588077 (-)
si:ch211-63p21.1 LOC103371025,LOC102193822,LOC102788031,LOC101475184,LOC100709095 coding upstream 2310 20087447 ~ 20093439 (-)
LOC120572322 NA coding upstream 82902 20168039 ~ 20173402 (-)
LOC120573477 NA coding upstream 158392 20243529 ~ 20244965 (-)
LOC120573438 NA coding upstream 431628 20516765 ~ 20519445 (-)
LOC120573440 NA coding upstream 449764 20534901 ~ 20540345 (-)
G144819 NA non-coding downstream 12336 20067080 ~ 20068405 (-)
G144816 NA non-coding downstream 18403 20061810 ~ 20062338 (-)
G144797 NA non-coding downstream 40999 19988574 ~ 20039742 (-)
G144803 NA non-coding downstream 64253 20014448 ~ 20016488 (-)
LOC120572271 NA non-coding downstream 147763 19928517 ~ 19932978 (-)
G144838 NA non-coding upstream 28579 20113716 ~ 20113941 (-)
G144839 NA non-coding upstream 41295 20126432 ~ 20126660 (-)
G144840 LOC104941081 non-coding upstream 45053 20130190 ~ 20159328 (-)
G144842 NA non-coding upstream 78041 20163178 ~ 20179576 (-)
G144853 LOC103375002 non-coding upstream 115004 20200141 ~ 20202103 (-)
G144730 LOC100695354,LOC106632790,LOC105940461,LOC104965881,LOC101481059,LOC106632521,LOC103369240,LOC102791106 other downstream 283211 19776680 ~ 19797530 (-)
si:cabz01074946.1 NA other downstream 414949 19657083 ~ 19665792 (-)
LOC120572670 NA other downstream 727435 19282933 ~ 19353306 (-)
prkd4 LOC103376196 other downstream 814388 19247950 ~ 19266353 (-)
clcn3 clcn3 other downstream 1023959 18962866 ~ 19056782 (-)
LOC120573300 slc12a6 other upstream 742146 20827283 ~ 20863889 (-)
nop10 NA other upstream 779620 20864757 ~ 20867106 (-)
LOC120573168 LOC103355779 other upstream 821318 20906455 ~ 20929559 (-)
si:dkey-172j4.3 LOC102306481,LOC103363024,LOC100708735,LOC101468909,LOC102781820,LOC101073787,LOC108246481,LOC106609052 other upstream 1266105 21351242 ~ 21438456 (-)
G145209 NA other upstream 1318718 21403855 ~ 21434195 (-)

Expression


Co-expression Network