nit1 (nit1)


Basic Information

Item Value
gene id nit1
gene name nit1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 19054776 ~ 19057674 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039822033.1
TGTTGGTTTCTATCCTCTGATAAacaacagagaagaagaaagtagCTCGCTGATCCTTCGTTTGCTATACAGTAATCACAAACTTgtgttaatattaacagtctatggttaaacAGGGAAGGTGAAACGCTGTCTGAGTCACTTGGACTAATGTTCACGGTCAGGTGCATTTTGGGAACATCTGCGAAGTATTTGGCCTCTCTCCGAGCTTTGAGAAAACAGATCAAGCTACAAAACAGGATGTCGACCTTACCTCACTCAGTGGTTGCAGTGTGTCAGGTAACAGCCACCCCGGACAAAGAGGCCAACTTCTCTGCCTGTAAACAGATGGTGAGGGAAGCCAAGGAGCGAGGGGCCAGCATGGTCTTCCTGCCCGAGGGCTTCGACTACATCGGATCCAGTCGAGAGGAGACGCTGTCGCTGTCTGAGAGCTTGACAGGAGACACAATCTCACAATACACTCAGCTGGCCAGAAAGTTGGAAGTCTGGCTGTCTCTTGGAGGATTTCATGAACGAGGACATGATTGGGAGTCTGACAAACGGATCTACAACAGTCACATCATAATTAATGATAAAGGGGACATCATTTCAGTCTACAGGAAGTCCCATTTGTTTGATGTGGAACTGCCAGAAAAACACGTATCCCTTAAAGAAAGTGCCTTCACCATCCCTGGACCCTCCCTTGTGTCTCCAGTCCAAACTCCCATCGGCAAGGTTGGCCTGGGCATCTGCTATGATCTGAGATTCCCTGAGTTATCACTGGCTCTTCAAAGGCATGGGGCCGAGATTCTGACATACCCATCAGCCTTCACTAAAGCAACAGGAGCTGCTCACTGGGAGGTTTTACTCCGTGCACGGGCAATCGAGACCCAGTGTTTTGTCCTGGCGGCAGCGCAGGTCGGCCAGCACCACGAGAAGCGATCATCCTATGGCCACGCCCTAGTGGTGGACCCGTGGGGTGAGGTGTTGGCCGACTGCGGAGGGGAGAAGCCAggcgtggtggtggtggagatCGACCTGGAGAAAGTCAGCAGCACCAGGAAGAACATGCCGGTCCAACAGCACCGCAGAGACACTGGTTTCTATCACAGTCTGGAGAAGACTTGACTACAAGAGAAGTGAAAAATTCAAACTCAGTTTAGGTTTCTGTCACGATGCATCATGAgcaccttaaagtgctcatattatgctttttggctttttccctttcctctattgtgttctatatctttttttgtgcatgtaataggtttacaaagtgaaaaagcccaaa

Function

symbol description
nit1 Predicted to act upstream of or within nitrogen compound metabolic process. Orthologous to human NIT1 (nitrilase 1).

NR:

description
nitrilase homolog 1

GO:

id name namespace
GO:0006807 nitrogen compound metabolic process biological_process
GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds molecular_function

KEGG:

id description
K11206 NIT1, ybeM; deaminated glutathione amidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039822033.1 True 1273 mRNA 0.49 6 19054776 19057674

Neighbor

gene id symbol gene type direction distance location
ino80b ino80b coding downstream 62996 18984632 ~ 18991780 (-)
trnad-guc_7 NA coding downstream 83313 18971392 ~ 18971463 (-)
trnad-guc_6 NA coding downstream 87763 18966942 ~ 18967013 (-)
trnad-guc_5 NA coding downstream 89339 18965366 ~ 18965437 (-)
trmt10b trmt10b coding downstream 109324 18938118 ~ 18945452 (-)
trnas-gcu_6 NA coding upstream 7486 19065160 ~ 19065241 (-)
si:ch211-168d1.3 rin1,LOC102778665,LOC104958383 coding upstream 46341 19104015 ~ 19134265 (-)
gal3st3 gal3st3 coding upstream 97358 19155032 ~ 19185791 (-)
klc2 klc2,LOC102775952 coding upstream 208779 19266453 ~ 19281456 (-)
sf3b2 sf3b2 coding upstream 299689 19357363 ~ 19369635 (-)
LOC120572676 NA non-coding downstream 52545 18993469 ~ 19002231 (-)
G144346 NA non-coding downstream 118549 18935975 ~ 18936227 (-)
G144303 LOC103360597 non-coding downstream 224461 18828464 ~ 18830315 (-)
G144275 NA non-coding downstream 354221 18700209 ~ 18700555 (-)
LOC120573605 NA non-coding downstream 804719 18248443 ~ 18250057 (-)
G144422 NA non-coding upstream 40908 19098582 ~ 19098840 (-)
G144423 NA non-coding upstream 41220 19098894 ~ 19099197 (-)
G144424 NA non-coding upstream 42306 19099980 ~ 19100230 (-)
G144425 NA non-coding upstream 42754 19100428 ~ 19100837 (-)
G144476 NA non-coding upstream 176647 19234321 ~ 19235524 (-)
G144258 NA other downstream 457545 18595102 ~ 18597231 (-)
c14h4orf48 cunh4orf48,lg24h4orf48,lg3h4orf48,c18h4orf48,LOC102785068 other downstream 515153 18536143 ~ 18539623 (-)
mrpl52 mrpl52,LOC102784052 other downstream 881749 18169214 ~ 18173027 (-)
G144058 NA other downstream 931086 18113852 ~ 18123690 (-)
LOC120573700 LOC100692994,LOC102197104,LOC102799729,LOC101170466 other downstream 973972 17973899 ~ 18080804 (-)
prkd4 LOC103376196 other upstream 190276 19247950 ~ 19266353 (-)
LOC120572670 NA other upstream 225259 19282933 ~ 19353306 (-)
si:cabz01074946.1 NA other upstream 599409 19657083 ~ 19665792 (-)
G144730 LOC100695354,LOC106632790,LOC105940461,LOC104965881,LOC101481059,LOC106632521,LOC103369240,LOC102791106 other upstream 719006 19776680 ~ 19797530 (-)
LOC120573300 slc12a6 other upstream 1769609 20827283 ~ 20863889 (-)

Expression


Co-expression Network