senp3b (LOC104962536)


Basic Information

Item Value
gene id senp3b
gene name LOC104962536
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 6343629 ~ 6361111 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039822036.1
TGTTGTAGTTGACATGAGAGCGAAAAATCTGCAGTGATCCGCCGGCTCAGCGCATCTCTCGTTTTCTTACAGACCTTTTCAATTGAAATAGATTCTTCTGTGTAGATTTCACGTACATCGTTGGCTGTATTCTACCATTTATGTTAAGCGTATGCGTTTTTCTCTGAACCGGAAGACCTAAAAGAAATCAAAGTTCGCAAGGAGGTGACATCTGGCTGCTCCACACCTGACTTCATTGAATGAGGTTCAACACCAATTAGCATTTGTTTTGGTTCGATACCCATACAAATTAAACACGCCCAACATTCAGTCGGAAGCAGCTGGACACATTCATATAAATCTGCAGGCTAACGGTGACGAGCTGGCGCAGGTCGTGGGTTGTCCGTGGATAATGCGAGACAGTGGCGGTAGCCTGGCCCAGAACCGCTGGCAGGGAGACCTGGGTCTGACCGCTGTGGGGCAAGACGACACAGGAGGAGGTGGGATCCCTGGAGACCACCTCATTGTCCCGGTGTCAGGCCACAGTGTACCCAGTCCCATGCACCTCAGACTGGGGCAGAAAGAGAAGGTGTGGACAGGCGAGTAtgtggaggaggatgaggatgaagacGAGGACGGTATGGGTATGGGTATGATCAAGCCAGTAGCTGATGAGGATGAAGAAAACAATCTGGATGGGGAGGACGAGTTAGAGTTTGAGGGCAAGGGTTGGGATAACAatgaggaggacgaggaggaggaggaggaagaagatgatgaagaggaggaggaggatgaggtggaagatgaaggagaggaggaagagttgGAGTGGGAGGTCCCAGAATTTCCCTCCCAGTCCACGCAGCACCCTCATTCACAGCAGCAACACCACCAACATCACGGACCCCAGCAGAAGGCAGAAGAGGGCGGTGACGTCCCTGGAGAGCACCCGGTCTCCCCGGCCAAAGCCGGGGACGTGTTCAGGTCCCACCTCAGCAGGTACAGGGCCCTGCGGAGGCTCCGGCGCTGGCAGCGCTTGCGATCCCACGGCGGCCTTGGATTTCGGCTAACCAAGCACTGGAAGAGCTGGCGCCAGCGGGCGCAGTGGGTATGCTCCCAAGGGTACCGGTACAGCCAAAGAGGGCGAAGGCACAATCTGTACGGCAAGCAGAGGAGGACAAAAAGGTATCGGCAATCGCCATACTCCGACGGAGAGGACGACACCAACGATGAGAGGTTCACCGCGTCGGATAGAGATGAACACATGAATGGCTGCTCTCCAGTCAAacaagaggacagagggaggcgGGAAGTGGAGGTCAAACCAGTGGAGCTGGCCCTTACTGAGGAACACATGAGTTTTGTGACTGGTATTCTTGAAGAGTCTCTGCAGCAGTACGGCAGCTTGATCCCCGTCCATGTGGATGACATTGTGGAGAAGCTTCAGGACATCTTCAGCGAGAGCTTCTCACAGCCACACAGGAAAGCAGTGGTCCAGCACCTAATACAATCCTTCCAGCGGTCGTCGGGCTCGTCCCTGGCTAAAACATTCAGAGTCAATTACAAACGCCACGTTCTGACCATGGATGACCTGGGCACTCTGTACGGACAGAACTGGCTCAACGACCAGatTATGAACATGTATGGTGACCTGGTCATGGACTCTGTGCCAGAGAAGGTTCACTTTTTCAACAGCTTCTTTTATGATAAGCTAAGGACAAAAGGCTATGATGGAGTCAAACGGTGGACCAAAAATGTTGACATCTTTCAGAAGGATCTGTTGTTGATCCCCATCCACCTGGAGGTCCACTGGTCCCTGGTCAGTGTTGACATTCCTCGTCGAGCCATCACATACTTTGACTCTCAGCGGACTCTCAACAGACGCTGCCCGAAGcaCATTTTTAAGTATCTGCAAGCGGAGGCCATCAAGAAAGACCAACAGGACTTTTTGGCGGGATGGAAAGGCTTTTTCAAAATGAATGTGGGTCGTCAAAACAACGACAGTGACTGCGGGGCTTTTGTGCTACAGTACTGCAAGTGTCTGGCACTAGGGCAGCCGTTCAGCTTTGGCCAGCTGGATATGCCCCGGCTGAGGAGGCAAATGTACAAAGAACTCTGTCACTGCAAGCTCACCCTGTGAccctccacccccaccctcGGCCCGCCATCTCCACCTGCTCCCGCCCTTACACTTAACAAGACGGAGGGACAATGCCATGACAAGAAGAGGGCACGGGGGAGCAAACGATggactggaaaaagagaaacttttcagaaactttatttttctctgccAACATCCAGAGAAATTCCTTCTTCTATTGTAGGTGATGTCATTGTTTcactttttgtctctctttgctTCCCTCTCTCCACCCTTTTTTGAAAACTCCTGATTTAATTTCCATGTCATGGTAATTCCTTTGTGGTTGACAGAGGCCAAGGCTAGCTTCCGTTTTGGGAAATGTGCTGACCTTCCATCCTATCGTagtccaccttttttttttctttcagtctgAATGGGAGCATGAAGAAGATTATATCTAAAGAATACAGTCCAGATGAAGGGTCGGACCCCAGTTAGTCCCAACCTCCAGTACTACTTTGACTTCAGATGCCTGAACAGTGAGTGCAGAGGTGGCGTGGGTGGACGGCAAAATCATTTGAACCAGTCTGTGTAAGCTTGTGGTTAAATGGTACTAGTGGATGTACCCGCCCTCCATCCATGCAGTCCACACAGTAGGTTGAAAGAAGTGAGAATCTCAAAAAAAACGTTACCACACCCGACATAAAATACACTTCCCCCGTGCTACAGCCAATGTTACGTTGGCCAGTCCATCGATCCAGTCGTCACGTGATGTTTGCCACTGTAGCGCGACGTGACCTTTCCGATGTACATTTGTTAAACGATTTCCTCCAAGGTGTTTAGAAGAATTTTCAAGTGAAAATGGAGCTTGCTAGTTGACGCTGCCATATCGACGTCAGAAAATGCACTTCCAGCGCGTGAGGAGCCATTctagtgcttttttt

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0008234 cysteine-type peptidase activity molecular_function

KEGG:

id description
K08593 SENP3; sentrin-specific protease 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039822036.1 True 3012 mRNA 0.51 12 6343629 6361111

Neighbor

gene id symbol gene type direction distance location
eif4a1a LOC107098142,LOC103365478,LOC100693841,LOC103148870,LOC102238331,LOC101477102 coding downstream 2892 6331688 ~ 6340737 (-)
LOC120573735 NA coding downstream 6870 6336621 ~ 6336759 (-)
LOC120573734 NA coding downstream 7997 6335494 ~ 6335632 (-)
tm4sf21b NA coding downstream 99960 6237573 ~ 6243669 (-)
trappc14 LOC104941436 coding downstream 158005 6158858 ~ 6185624 (-)
LOC120573386 NA coding upstream 4860 6365971 ~ 6367776 (-)
kiaa0232 kiaa0232 coding upstream 59422 6420533 ~ 6432598 (-)
LOC120572244 NA coding upstream 90551 6451662 ~ 6452673 (-)
LOC120573666 NA coding upstream 94896 6456007 ~ 6490226 (-)
LOC120572494 LOC102208922,LOC107376753,LOC104965782,LOC101158483,LOC106907457,LOC103033313 coding upstream 153769 6514880 ~ 6546583 (-)
G141613 NA non-coding downstream 77046 6266151 ~ 6266583 (-)
G141612 NA non-coding downstream 77604 6265440 ~ 6266025 (-)
G141601 NA non-coding downstream 186216 6156052 ~ 6157413 (-)
G141470 NA non-coding downstream 351402 5989895 ~ 5992227 (-)
G141468 NA non-coding downstream 372242 5970935 ~ 5971387 (-)
G141667 NA non-coding upstream 94828 6455939 ~ 6511995 (-)
G141683 NA non-coding upstream 197187 6558298 ~ 6645212 (-)
G141688 NA non-coding upstream 216066 6577177 ~ 6578755 (-)
G141741 NA non-coding upstream 1034048 7395159 ~ 7462473 (-)
G141773 NA non-coding upstream 1157154 7518265 ~ 7518467 (-)
sox19b LOC104926817,LOC103365479,LOC100693580,LOC102199731,LOC101477749,LOC104962535 other downstream 27812 6308898 ~ 6315817 (-)
LOC120572220 NA other downstream 112332 6221971 ~ 6231297 (-)
gal3st4 gal3st4,LOC104939968 other downstream 123369 6177921 ~ 6220260 (-)
G141439 NA other downstream 500483 5743559 ~ 5843146 (-)
G141400 NA other downstream 743167 5596958 ~ 5600462 (-)
tbc1d14 tbc1d14 other upstream 14861 6375972 ~ 6416457 (-)
LOC120572295 rasgrp2,LOC104942268 other upstream 1287861 7648972 ~ 7703618 (-)
fcer1g NA other upstream 1420800 7781911 ~ 7787667 (-)
LOC120573451 NA other upstream 1479810 7840921 ~ 7937490 (-)
G141913 NA other upstream 1574119 7935230 ~ 7987441 (-)

Expression


Co-expression Network