LOC120572715


Basic Information

Item Value
gene id LOC120572715
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 24055000 ~ 24075036 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039822092.1
caggaagaagaagaagaagaagaagaagaagaagaacaacatCCTGGTGCTGCTTCCATATCATATCCACATAGATTTATCTATGCCATATCCAGCGACATTCGGGCGACAGTGTCACCGTGTTTACTGAAGTGCTACCCGGGCGGTTTTAAATCGAACCGCCGCAAGAGTGGCTATGGCTACCAAGAAAAGAAGTCTTTCCCGTGACAACGGGGAGCGGGACGGATGGCTGCTCCCTCACAAGCAGCTCAAGGCGGATGGCAAGCGACACGTAGCTGCCTTGATTCTGGCGAGGGGAGGAAGCAAAGGAATCCctcaaaaaaacatcaaaaagttaGCTGGAATCCCGCTGCTTGGATGGGTGCTGAGGACTGCTGCGGACTCCGATGTGTTTGACAGTATTTGGGTATCAACTGACCATGATGAGATCGAGAAGGTGGCAAAATCCTGGGGTGCCCAGGTGCACCGCAGGAGTCCTGAAGTCTCCAAAGACGCTTCCACGTCTCTGGAAACCATCAGGGAGTTTCTCGAACAAAGAAAAGAAGTGGAGGTGATCTGTAACATTCAGGCCACTGCCCCGTGTCTCCATCCGTTCCATGTGAAAGCGGCCCTGAAGATGATCACGGAGGAGGACTTTGATTCGGTCTTCTCGGTGGTCAGGAGACACCAGTTCCGCTGGAAGGAGGTCAAAGAAGGATCTGGTGAGTTGACCGCCCCGTTGAATCTGGACCCGGCCAAGCGTCCGCGGCGTCAGGACTGGAACGGAGAGCTGGTTGAGAACGGCTCCTTTTACTTCGCCACTAGAGAGCTAGTGGAGAACAACCTTTTGCAGGGCGGTAAGGTAGCCTACTACGAGATGACGCCAGAGTACAGCGTGGACATCGACGTGGACATCGACTGGCCTGTGGCAGAACAGAGGGTTCTCAGGTATGGTTACTTTGGCAAGGACAAATCTTTTAGCCTCTGGTGGATCATCAGACAATGGATTTACAAGATGTGGCATTGGATGGGATGGTTACTTTGGCCAGGACAAAAGTAATGAAGAATCTTTTAGCCTCTTGTGGAGCATCGGAAAATGGATTTACAAGATGTGGCATAGAAGGGTAAAACGTCTACATGCATCTGGATCaacattttgtcaacatttgaaaaaacttaaaaccacatcaatgcgttGGCCAGACTTTTATCTCTATTGTGAtgatgagaggaggaggaggagaggaaggaaggagaagtGTTATTTCTCAGCTAACATGATGTAATGATGGACTAACTGACCAACTGACTGACTCCTAACTGACTTCAAACTTAATCACCaagctatgaaaagccgtttttggtcttctctacacttttccaaccatcacaactctagtggtggttgaaataaacacataggttaccgatttacatgtggaaatatgttggctctattcacactaaaagtactatttttttGAATGGAGTCCGGGAGGATATTTTTGGCACGaacactgttagctagctagcgctaacGGAGATGTAGCTGGCTAGCTAACATTGGCTGCTCCTGTGACTCGGATGTTTTAAATCGGACGCTTCATTAAACTTCGTCAGAAGAGGGATTcttccatctatctatctctgaAGGGTAAAGACTCACAAGTGTAAGCAAAACTAGTGTATTAGCTATATATGGCTAACGCTCGCGCGGCTAAAACCTtccaaactccatgtaaataaacagtaattttagcatcttaAAACACACTTCCCAGCAAACATTTGGACGTTTCATGACCGTTGAAAAGACGTCCGTCCGAGACGTCCCGTCATGGTTGAAAAATAGTTCCAAAATGAAAGTTGAACTTGGCCGTGAATTCCACGTCTTTTCTGCGCGTCCCTGGACGTCAGAATTAGTCTTCTTCTGGATGTTTATAAGGTGTGTTTCTGCATAagtgtaggctatatataagcCTGCATATAAAATAATCATACACCCATTGTGTTAAATCGTGAACGGCGATCTTGACGTTTACACATCTAAACTTGACAAAGGTTCTAAAAAGGTCCAAAATCGGTCCAGTCATACCTGAACGTCTATAACACGTTATAATCACGTGTAGATCAAACAACACTTTACTTATACATTTAAGTtcttattaatataattaattgCATCTAAATATAGGGTTAAGGTTTGTTGCATGTAATTATGCATAATTTATAGTTATTACAGTAACTACATGTAACAAGGACcctgtaaaataaagtgttcttattttca
>XR_005641478.1
caggaagaagaagaagaagaagaagaagaagaagaacaacatCCTGGTGCTGCTTCCATATCATATCCACATAGATTTATCTATGCCATATCCAGCGACATTCGGGCGACAGTGTCACCGTGTTTACTGAAGTGCTACCCGGGCGGTTTTAAATCGAACCGCCGCAAGAGTGGCTATGGCTACCAAGAAAAGAAGTCTTTCCCGTGACAACGGGGAGCGGGACGGATGGCTGCTCCCTCACAAGCAGCTCAAGGCGGATGGCAAGCGACACGTAGCTGCCTTGATTCTGGCGAGGGGAGGAAGCAAAGGAATCCctcaaaaaaacatcaaaaagttaGCTGGAATCCCGCTGCTTGGATGGGTGCTGAGGACTGCTGCGGACTCCGATGTGTTTGACAGTATTTGGGTATCAACTGACCATGATGAGATCGAGAAGGTGGCAAAATCCTGGGGTGCCCAGGTGCACCGCAGGAGTCCTGAAGTCTCCAAAGACGCTTCCACGTCTCTGGAAACCATCAGGGAGTTTCTCGAACAAAGAAAAGAAGTGGAGGTGATCTGTAACATTCAGGCCACTGCCCCGTGTCTCCATCCGTTCCATGTGAAAGCGGCCCTGAAGATGATCACGGAGGAGGACTTTGATTCGGTCTTCTCGGTGGTCAGGAGACACCAGTTCCGCTGGAAGGAGGTCAAAGAAGGATCTGGTGAGTTGACCGCCCCGTTGAATCTGGACCCGGCCAAGCGTCCGCGGCGTCAGGACTGGAACGGAGAGCTGGTTGAGAACGGCTCCTTTTACTTCGCCACTAGAGAGCTAGTGGAGAACAACCTTTTGCAGGGCGGTAAGGTAGCCTACTACGAGATGACGCCAGAGTACAGCGTGGACATCGACGTGGACATCGACTGGCCTGTGGCAGAACAGAGGGTTCTCAGGTATGGTTACTTTGGCAAGGACAAATCTTTTAGCCTCTGGTGGATCATCAGACAATGGATTTACAAGATGTGGCATTGGATGGGATGGTTACTTTGGCCAGGACAAAAGTAATGAAGAATCTTTTAGCCTCTTGTGGAGCATCGGAAAATGGATTTACAAGATGTGGCATAGAAGGGTGGCATACGGTAGGCTTTTGGAGCTTTTATTGGCTGAAAACCACCACATGCTGCTTCTGCTTCTGCTtctgctggtgctgctgctgctgctggagacaaGGTTAATGACAGCAGAGGTCCAGGTCAGAAAAGCTAAAAAGAAGCAACTAATTAACATCTCATTTGGGTAACTACCTGATGGCAAAACTCACTTGTCTCTCAGGCTGAGGAACCAGTATCCGTTGCTTGGGGTAACTTCAACCTTCCCCTTCCTGTTGATTGATTGTCTGGCCACACCCAGATCCCAGTCAGTCTTCCCGCCCACCTCCACCTGACCAAAGGAAGTAGGACATTTACGTACATACAATCATACCAAAGGCTGGGAGGACATTCATGTAAATATTTGCTCATGTTCTGttaacttttattatttttattttttatttttattattattttacattagAATTTTGTGATCACAACATAATGCACATCCTTTTTATTGTGATCTAAAGAGAGAGTGCCTCTTACCTCCCAGTAGTGTCTCCCAGACGAGATCGCCTCCCTCCCTATGACACAGACGACTCTGTTAAACCGCTCCGGATTGTCTGCAAGCATCTGGTCTTTATCTCCACACCTCACctgcagaaacacagacagttaTTGTTATAGCAAACTTCATAGGCACGACACATTTTCTTTAtaatttacagtaaatatatgtGTGAATATACATCTCCAAtgcaaacatgaaaaaaaaacggcaACGGTATGGAGAATTTTTCAAAACCAAAAATCAATAACATACCAAGATTTTAGTCCCAATTTATGGACATTTTCAAGATTGTATGGAAATTTCTCGTGGGTTTGTGATTGCATTAAAAACGGAATGATTGCCCttactggtgtgtgtttgtcaggtgCATGGGTCCGTGTTGTGTGTCCCCCCGTCTTTTTTGGACCTGAACTGGGTTGGTTTGTGGGTGGGTAGGGGACTTGGAAAATTACACACTGTTTACACTATACCTTGTTCACCACGACTTGGGCTATGTGTCACCggttgtaaaaatgtaaacttaaataaaaaaaaaagttgggaaAACAAC
>XR_005641479.1
caggaagaagaagaagaagaagaagaagaagaagaacaacatCCTGGTGCTGCTTCCATATCATATCCACATAGATTTATCTATGCCATATCCAGCGACATTCGGGCGACAGTGTCACCGTGTTTACTGAAGTGCTACCCGGGCGGTTTTAAATCGAACCGCCGCAAGAGTGGCTATGGCTACCAAGAAAAGAAGTCTTTCCCGTGACAACGGGGAGCGGGACGGATGGCTGCTCCCTCACAAGCAGCTCAAGGCGGATGGCAAGCGACACGTAGCTGCCTTGATTCTGGCGAGGGGAGGAAGCAAAGGAATCCctcaaaaaaacatcaaaaagttaGCTGGAATCCCGCTGCTTGGATGGGTGCTGAGGACTGCTGCGGACTCCGATGTGTTTGACAGTATTTGGGTATCAACTGACCATGATGAGATCGAGAAGGTGGCAAAATCCTGGGGTGCCCAGGTGCACCGCAGGAGTCCTGAAGTCTCCAAAGACGCTTCCACGTCTCTGGAAACCATCAGGGAGTTTCTCGAACAAAGAAAAGAAGTGGAGGTGATCTGTAACATTCAGGCCACTGCCCCGTGTCTCCATCCGTTCCATGTGAAAGCGGCCCTGAAGATGATCACGGAGGAGGACTTTGATTCGGTCTTCTCGGTGGTCAGGAGACACCAGTTCCGCTGGAAGGAGGTCAAAGAAGGATCTGGTGAGTTGACCGCCCCGTTGAATCTGGACCCGGCCAAGCGTCCGCGGCGTCAGGACTGGAACGGAGAGCTGGTTGAGAACGGCTCCTTTTACTTCGCCACTAGAGAGCTAGTGGAGAACAACCTTTTGCAGGGCGGTAAGGTAGCCTACTACGAGATGACGCCAGAGTACAGCGTGGACATCGACGTGGACATCGACTGGCCTGTGGCAGAACAGAGGGTTCTCAGGTATGGTTACTTTGGCAAGGACAAATCTTTTAGCCTCTGGTGGATCATCAGACAATGGATTTACAAGATGTGGCATTGGATGGGATGGTTACTTTGGCCAGGACAAAAGTAATGAAGAATCTTTTAGCCTCTTGTGGAGCATCGGAAAATGGATTTACAAGATGTGGCATAGAAGGggCAACAAAGTATTtaaagacaagaaaaagaaaagaacaaataacTTCCAGTTGCCGTCCCGTCACTCCTTCATGATGACTGGC
>XR_005641480.1
caggaagaagaagaagaagaagaagaagaagaagaacaacatCCTGGTGCTGCTTCCATATCATATCCACATAGATTTATCTATGCCATATCCAGCGACATTCGGGCGACAGTGTCACCGTGTTTACTGAAGTGCTACCCGGGCGGTTTTAAATCGAACCGCCGCAAGAGTGGCTATGGCTACCAAGAAAAGAAGTCTTTCCCGTGACAACGGGGAGCGGGACGGATGGCTGCTCCCTCACAAGCAGCTCAAGGCGGATGGCAAGCGACACGTAGCTGCCTTGATTCTGGCGAGGGGAGGAAGCAAAGGAATCCctcaaaaaaacatcaaaaagttaGCTGGAATCCCGCTGCTTGGATGGGTGCTGAGGACTGCTGCGGACTCCGATGTGTTTGACAGTATTTGGGTATCAACTGACCATGATGAGATCGAGAAGGTGGCAAAATCCTGGGGTGCCCAGGTGCACCGCAGGAGTCCTGAAGTCTCCAAAGACGCTTCCACGTCTCTGGAAACCATCAGGGAGTTTCTCGAACAAAGAAAAGAAGTGGAGGTGATCTGTAACATTCAGGCCACTGCCCCGTGTCTCCATCCGTTCCATGTGAAAGCGGCCCTGAAGATGATCACGGAGGAGGACTTTGATTCGGTCTTCTCGGTGGTCAGGAGACACCAGTTCCGCTGGAAGGAGGTCAAAGAAGGATCTGGTGAGTTGACCGCCCCGTTGAATCTGGACCCGGCCAAGCGTCCGCGGCGTCAGGACTGGAACGGAGAGCTGGTTGAGAACGGCTCCTTTTACTTCGCCACTAGAGAGCTAGTGGAGAACAACCTTTTGCAGGGCGGTAAGGTAGCCTACTACGAGATGACGCCAGAGTACAGCGTGGACATCGACGTGGACATCGACTGGCCTGTGGCAGAACAGAGGGTTCTCAGGTATGGTTACTTTGGCAAGGACAAATCTTTTAGCCTCTGGTGGATCATCAGACAATGGATTTACAAGATGTGGCATTGGATGGGATGGTTACTTTGGCCAGGACAAAAGTAATGAAGAATCTTTTAGCCTCTTGTGGAGCATCGGAAAATGGATTTACAAGATGTGGCATAGAAGGGTGGCATACGGTAGGCTTTTGGAGCTTTTATTGGCTGAAAACCACCACATGCTGCTTCTGCTTCTGCTtctgctggtgctgctgctgctgctggagacaaGGTTAATGACAGCAGAGGTCCAGGCTGAGGAACCAGTATCCGTTGCTTGGGGTAACTTCAACCTTCCCCTTCCTGTTGATTGATTGTCTGGCCACACCCAGATCCCAGTCAGTCTTCCCGCCCACCTCCACCTGACCAAAGGAAGTAGGACATTTACGTACATACAATCATACCAAAGGCTGGGAGGACATTCATGTAAATATTTGCTCATGTTCTGttaacttttattatttttattttttatttttattattattttacattagAATTTTGTGATCACAACATAATGCACATCCTTTTTATTGTGATCTAAAGAGAGAGTGCCTCTTACCTCCCAGTAGTGTCTCCCAGACGAGATCGCCTCCCTCCCTATGACACAGACGACTCTGTTAAACCGCTCCGGATTGTCTGCAAGCATCTGGTCTTTATCTCCACACCTCACctgcagaaacacagacagttaTTGTTATAGCAAACTTCATAGGCACGACACATTTTCTTTAtaatttacagtaaatatatgtGTGAATATACATCTCCAAtgcaaacatgaaaaaaaaacggcaACGGTATGGAGAATTTTTCAAAACCAAAAATCAATAACATACCAAGATTTTAGTCCCAATTTATGGACATTTTCAAGATTGTATGGAAATTTCTCGTGGGTTTGTGATTGCATTAAAAACGGAATGATTGCCCttactggtgtgtgtttgtcaggtgCATGGGTCCGTGTTGTGTGTCCCCCCGTCTTTTTTGGACCTGAACTGGGTTGGTTTGTGGGTGGGTAGGGGACTTGGAAAATTACACACTGTTTACACTATACCTTGTTCACCACGACTTGGGCTATGTGTCACCggttgtaaaaatgtaaacttaaataaaaaaaaaagttgggaaAACAAC

Function

GO:

id name namespace
GO:0009103 lipopolysaccharide biosynthetic process biological_process

KEGG:

id description
K21749 CMAS; N-acylneuraminate/3-deoxy-D-glycero-D-galacto-nononate cytidylyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039822092.1 True 2269 mRNA 0.44 7 24067391 24075036
XR_005641478.1 False 2189 transcript 0.46 8 24055000 24075036
XR_005641479.1 False 1187 transcript 0.51 8 24057928 24075036
XR_005641480.1 False 2109 transcript 0.47 9 24055000 24075036

Neighbor

gene id symbol gene type direction distance location
exoc6b LOC102292959 coding downstream 39492 23882285 ~ 24015508 (-)
LOC120572138 NA coding downstream 192148 23860091 ~ 23862852 (-)
LOC120572137 NA coding downstream 215625 23818988 ~ 23839375 (-)
LOC120572538 NA coding downstream 246477 23807071 ~ 23808523 (-)
LOC120572537 NA coding downstream 247955 23801161 ~ 23807045 (-)
tmem185 tmem185a coding upstream 40879 24115915 ~ 24126151 (-)
LOC120573320 NA coding upstream 70682 24145718 ~ 24150682 (-)
LOC120573098 NA coding upstream 100427 24175463 ~ 24186222 (-)
LOC120573102 NA coding upstream 162410 24237446 ~ 24240886 (-)
LOC120573110 NA coding upstream 956383 25031419 ~ 25035667 (-)
LOC120573481 NA non-coding downstream 183914 23870127 ~ 23871086 (-)
G145670 NA non-coding downstream 208522 23845565 ~ 23846478 (-)
G145635 NA non-coding downstream 287227 23767188 ~ 23767773 (-)
G145628 NA non-coding downstream 394352 23660315 ~ 23660648 (-)
G145625 NA non-coding downstream 465690 23581520 ~ 23589310 (-)
LOC120573136 NA non-coding upstream 191268 24266304 ~ 24266865 (-)
LOC120573133 NA non-coding upstream 196330 24271366 ~ 24279968 (-)
G145808 NA non-coding upstream 232507 24307543 ~ 24307840 (-)
G145813 NA non-coding upstream 243987 24319023 ~ 24319331 (-)
LOC120573135 NA non-coding upstream 293642 24368678 ~ 24932188 (-)
LOC120572139 NA other downstream 199732 23849670 ~ 23855268 (-)
G145509 trpc5,LOC103389248 other downstream 1237377 22814906 ~ 22817623 (-)
G145342 NA other downstream 1824498 22230059 ~ 22230502 (-)
shroom4 shroom4,LOC107741461,LOC107562256,LOC107691917 other downstream 1928519 22045501 ~ 22126481 (-)
ccnb3 ccnb3 other downstream 2075574 21881290 ~ 21979426 (-)
LOC120572219 NA other upstream 57190 24132226 ~ 24140420 (-)
LOC120573113 NA other upstream 158605 24233641 ~ 24363065 (-)
G145810 NA other upstream 233318 24308354 ~ 24313417 (-)
col4a5 col4a5,LOC106608922 other upstream 477116 24552152 ~ 24642084 (-)
G146008 NA other upstream 905211 24980247 ~ 24980952 (-)

Expression


Co-expression Network