LOC120572765 (LOC101480284)


Basic Information

Item Value
gene id LOC120572765
gene name LOC101480284
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 35012280 ~ 35022647 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039822192.1
TTACTACGCCTACTAACAGGACACTCCCACCAAAGTGTATGTATAAAAAGAGCAGTCAGTGGTGACTACTCTTATCAAAAGAACAGTTCATCAAAGGAACATTGTGGTCTCATTAACAGGATTCTTCTGCTTTCCAGAGTGAAAATGGTGAATTATGAAGTGACTCTATCCACTGGCGATCTTGCCTATGCCACCACTTTTAACAAGGTCTTCATTAAGCTGGTAGGAACAGATGGGGAGAGCAAACGCACGTGGCTCAAAGGAGCTTTACAATTCACCAAAGGAACATTGATATCCTGCCCTGTTTCCATTGGAAAGCTGGTCCTGATAGAGCTGGACAAACAGCCTCTCCCACTGTTCCCTGAAGACTCTTGGTTCCCCGCCAAGGTGGAAGTGAAATCTCCTGAGGGAGATACCTACACCTTTCCTATCTACCGTTGGATCACTGACAGCAAGGTGCACCGCTTCCGAGAGGGAACAGCTCTGAGAGTCTTCGAAGACAACCATCATCTTGGCAGGTACAGTCGGCAGATGGAACTGGGTCAAAGAGAGAAGGCCTATCGCTGGCATGTGTATGCAGAGGGAATACCCCACTGCATGAAGTCAACGGACCCTCTTTCTTTGCCTTGTGAGATCCGCTTCTCCTTTACTAAGACCACAGAGTTTCTCTACACTGCAGCCACCGGGTTGACTGAACTGCAACTTAAGGGTCTGGCTGATTGCAAGAAGAACTGGACAAATATTGATGATATCAATCGGGTGTTCTGCTCCAAACGGACTGACATATCAGACTATGTCCAGGAACATTGGAAGGAGGACGCTTTTTTTGGCTACCAGTATCTAAATGGTCTCAACCCCATGTTGATCCGACGTTGTTCAGCTCTGCCCGATAACTTTCCTGTCACTGACAACATGGTCTCCCTCCATGGTCAGGGTAGCTTGAGAAATGAAATGGAGAAAGGCAACATATTCCTGTGTGACTACAAGCTTTTGGATGGAGTGAAAGCAAACACCATCAATGGGAAGAAGCAGTACTTGATGGCTCCCCTCGTCCTGCTCCATGAAACACCTGATGATAAACTGATGCCAATTGCTATCCAGCTGAAGCAGACTCCAGCAGATGACAACCCCATCTTCTTTCCTACCGATTCTGAGTACGACTGGTTGATGGCCAAGATTTTTGTGAGAAGTGCAGATTTCAGTGAGCATCAACTCAATGTTCACCTGCTGCGCACTCATCTGCTGGCTGAAGTGTTTGCAGTGTCACTGCTGCGTAATATGCCAATGGTGCATCCCCTGTACAAGCTCCTCATACCTCACACTCGCTACACTCTGCAGATCAACTACTTAGCTCGAAGTCTTCTAATATCTAAGACTGGAGTTTTTACACAGTTTGCAGCTTCTGGTGGAGGGGGTATGATAACAATCCTGAAGAGATCACTGTCCTCAATGACCTACAGCTCCCTCTGCATACCAGACGACATTGCTGAACGTGGTTTGGAGGCTGTGCCGAACTTCTACTACAGGGATGATGGACTCAAGCTTTGGGATATCATCCAAAGGTTTGTGCAGGGAGTGCTCAGCTTCTACTACAAGAATGATGCTGAGGTCCAAAAAGACTCCGAACTGCAGAAGTGGATTTCAGACATTTTTGAACATGGATTTCTTTCCCAAGCATGCACAGGAATTCCACAGAGTTTCACCACCGTGGTTGAGTTGGTCAAGTTTGTCACCATGGTGATCTTCACTTGCTCAGGACACCACTCAGCTGTGAATGCTGGACAGTATGACTATGATGGCTGGATGCCCAACACTCCCATTACTCTGCAACTTCCTCCACCAACCACAAAGGGGGAAACAAGCGAGGCCACGATGCTGAAGACATTCCCttccatcaacacaacagttcaTGGAATGGCCACCGTGTGGCTACTCAGCAAGCAGTCGTCTGACTTCGTCCCTCTTGGCCAATACCCAGAGGACCATTTCAGTGAGAAGATTCCCTGCAAGCTGATAAAGGATTTTCAAGGAGAGCTTGAAGGGTTAAGTGTGGTCATCAAAGCCAGAAACAAGAGGCTGGAGGTCCCATACACATACATGGatccaacaaagatggaaaacAGCGTGGCCATTTAAATAGCAGAAGGTGTGACCTCCTCAGCTGTTGGCCAAATTCAGCTTCATATTAACACAAGTGAGAAAGGGAAGAACTgcatgtttctgtttttaactGATACTATAGTGGAAAGAAATGACTGCATGTGATTGTTGTGTTCATGTATACAGTCTGATTGATTAAACTGTGGTGAAAAAAGGTGCTGTTTTAAATCATACACATCCTAAATCTTCGTAGTTTATCAATGACTACACAGGGCAtcttattaaaataaattacaaacgaaaagtaaaaaataaaaaatgtgaagCTGCTGCATTGAGAAGTTTCTTATAAACACATGTATCTttcag

Function

NR:

description
arachidonate 12-lipoxygenase, 12R-type

GO: NA

KEGG:

id description
K08021 ALOX12B; arachidonate 12-lipoxygenase (R-type)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039822192.1 True 2469 mRNA 0.45 15 35012280 35022647

Neighbor

gene id symbol gene type direction distance location
LOC120572836 NA coding upstream 122110 34865071 ~ 34890170 (+)
LOC120572822 NA coding upstream 129976 34873685 ~ 34882304 (+)
LOC120572811 NA coding upstream 344436 34653680 ~ 34667844 (+)
LOC120572763 NA coding upstream 360864 34643006 ~ 34651416 (+)
LOC120572771 NA coding upstream 389145 34568896 ~ 34623135 (+)
LOC120572630 NA coding downstream 5513 35028160 ~ 35032775 (+)
LOC120572841 NA coding downstream 35529 35058176 ~ 35065185 (+)
LOC120572778 NA coding downstream 78072 35100719 ~ 35181685 (+)
LOC120572631 NA coding downstream 89832 35112479 ~ 35117773 (+)
LOC120572935 NA coding downstream 107612 35130259 ~ 35133109 (+)
G148822 NA non-coding upstream 120660 34820778 ~ 34891620 (+)
G148797 NA non-coding upstream 274554 34678148 ~ 34737726 (+)
G148807 NA non-coding upstream 280686 34728439 ~ 34731594 (+)
G148777 NA non-coding upstream 454910 34509266 ~ 34557370 (+)
G148755 NA non-coding upstream 455188 34537069 ~ 34557092 (+)
LOC120573017 NA non-coding downstream 10129 35032776 ~ 35037939 (+)
G149100 NA non-coding downstream 23288 35045935 ~ 35049215 (+)
G149126 LOC106904641,LOC103129609,LOC105922223,LOC103371092 non-coding downstream 119939 35142586 ~ 35147864 (+)
G149127 NA non-coding downstream 128020 35150667 ~ 35154004 (+)
G149128 NA non-coding downstream 129463 35152110 ~ 35503528 (+)
LOC120572767 LOC101480284,LOC102312368,LOC100706304,LOC102797228,LOC101468181 other upstream 44848 34952498 ~ 34967432 (+)
LOC120572627 NA other upstream 114749 34808051 ~ 34897531 (+)
G148730 NA other upstream 211772 34775541 ~ 34800508 (+)
plod3 plod3,LOC103389255,LOC106511660,LOC100697420,LOC103371102 other upstream 539855 34428156 ~ 34472425 (+)
G148671 NA other upstream 1127381 33875923 ~ 33884899 (+)
LOC120572831 NA other downstream 50474 35073121 ~ 35088095 (+)
G149096 NA other downstream 100075 35122722 ~ 35128203 (+)
G149095 NA other downstream 113497 35136144 ~ 35142486 (+)
LOC120572790 NA other downstream 239505 35262152 ~ 35315419 (+)
G149172 NA other downstream 403602 35426249 ~ 35429043 (+)

Expression


Co-expression Network