LOC120572767 (LOC101480284,LOC102312368,LOC100706304,LOC102797228,LOC101468181)


Basic Information

Item Value
gene id LOC120572767
gene name LOC101480284,LOC102312368,LOC100706304,LOC102797228,LOC101468181
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 34952498 ~ 34967432 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039822194.1
GACACTCCCACCAAAGTGTATGTATAAAAAGAGCAGTCAGTGGTGACTACTCTTATCAAAAGAACAGTTCATCAAAGGAACATTTTGGTCTCATTAACAGGATTCTTCTGCTTTCCAGAGTGAAAATGGTGAATTATGAAGTGACTCTATCCACTGGCGATCTTGCCTTTGCCTCCACTTTTAACAATGTCTTCATTAggggggtgaaaaaaaaagaaggaaaaaaacaccGGATCTTATTCACATCAAATACTTTGATATCCTGCCCTGTTTCCATTGGAAAGCTGGTCCTGATAGAGCTGGACAAACAGCCTCTCCCACTGTTCCCTGAAGACTCTTGGTTCCCCGCCAAGGTGGAAGTGAAATCTCCTGAGGGAGATACCTACAACTTTCCTATCTACCGCTGGATCACTGACAGCAAGGTGCACCGCTTCCAAGAGGGAACAGCTCTGAGAGTCTTCGAAGACAAGCATCATCTTGGCAGGTACAGTCGGCAGCAGGAACTGGGTCAAAGAGAGAAGGACTATCGCTGGCATGTGTATGCAGAGGGAATACCCCACTGCATGAAGTCAACGGACCCTCTTTCTTTGCCTTGTGAGATCCGCTTCTCCTTTACTAAGACCACAGAGTTTCTCTACACTGCAGCCACCGGGTTGACTGAACTGCAACTTAAGGGTCTGGCTGATTGCAAGAAGAACTGGACAAATATTGATGATATCAATCGGGTGTTCTGCTCCAAACGGACTGACATATCAGACTATGTCCAGGAACATTGGAAGGAGGATGCTTTTTTTGGCTACCAGTATCTAAATGGTCTCAACCCCATGTTGATCCGACGTTGTTCAGCTCTGCCTGATAACTTTCCTGTCACTGACGACATGGTCTTCCGTCATGGTCAGGGTAGCTTGAGAAATGAAATGGAGAAAGGCAACATATTCCTGTGTGACTACAAGCTTTTGGATGGAGTCAAGGCAAACACCATCAATGGGAAGAAGCAGTACTTGATGGCTCCCCTCGTCCTGTTCCACAAAACACCTGATGATAAACTGATGCCTATTGCTATCCAGCTGAAGCAGACTCCAGCAGATGACAATCCCATCTTCTTTCCTACCGATTCTGAGTACGACTGGTTGATGGCCAAGATTTTTGTGAGAAGTGCAGATTTCAGTGAGCATCAACTCAATGTTCACCTGCTGCGCACTCATCTGCTGGCTGAAGTGTTTGCAGTGTCACTGCTGCGTAATGTGCCAATGGTGCATCCACTGTACAAGCTCCTCATACCTCACACTCGCTACACTCTGCAGATCAACTACTTAGCTCGAAGTCTTCTAATATCTGAGACTGGAGTTTTTAAACAGTTTGCAGCTTCTGGTGGAGAGGGTCTGATAACAATCCTGAAGAGATCACTGTCCTCAATGACCTACAGCTCCCTCTGCATACCAGAGGACATTGCTGAACGTGGTTTGGAGGCTGTGCCGAACTTCTACTACAGGGATGATGGACTCAAGCTTTGGGATATCATCCAAAGGTTTGTGCAGGGAGTGCTCAGCTTCTACTACAAGAATGATGCTGAGGTCCAGGAAGACTCCGAACTGCAGAAGTGGATTTCAGACATTTTTGAACATGGATTTCTTTCCCAAGCATGCACAGGAATTCCACAGAGCTTTACCACCGTGGTTGAGTTGGTCAAGTTTGTCACCATGGTGATCTTCACTTGCTCAGGACAGCACTCAGCTGTGAATACTGGACAGTATGACTATGATGGCTGGATGCCCAACACTCCCATCTCTCTGCAACTTCCTCCACCAACCACAAAGGGGAAAACAAGCAAGGCCATGATGCTGCAGACATTCCCTGACGTCAACACAACAGTTCATGGAATGGCCACCGTGTGGCTACTCAGCAAGCAGTCGTCTGACTTCGTCCCTCTTGGCCAATACCCAGAGGACCATTTCAGTGAGGAGATTCCCTGCAAGCTGATAAAGGATTTTCAAGCAAAGCTTGAAGGGTTAAGTGTGGTCATCAAAGCCAGAAACAAGAGCCTGGAGGTCCCATACACATACATGGATCCAACAGCGCTAGAAAACAGCGTGGCCATTTAAATAGCAGAAGGTGTGACCTCCTCAGCTGTTGGCCAAATTCAGTTTCATATTAACACAAGTGAGAAAGATAAGAActgcatgtttattttttaactgataCTATAGTGGAAAGAAATGACTGCATGTGATTGTTGTCTTTATGTATACAGTCTGATTGATTAAACTGTGATGAAAAAA
>XR_005641491.1
TTGTAATGCCAAGTAATGTataaacacttttatttcttttttcttttattactcCAGTTGATATCCTGCCCTGTTTCCATTGGAAAGCTGGTCCTGATAGAGCTGGACAAACAGCCTCTCCCACTGTTCCCTGAAGACTCTTGGTTCCCCGCCAAGGTGGAAGTGAAATCTCCTGAGGGAGATACCTACAACTTTCCTATCTACCGCTGGATCACTGACAGCAAGGTGCACCGCTTCCAAGAGGGAACAGCTCTGAGAGTCTTCGAAGACAAGCATCATCTTGGCAGGTACAGTCGGCAGCAGGAACTGGGTCAAAGAGAGAAGGACTATCGCTGGCATGTGTATGCAGAGGGAATACCCCACTGCATGAAGTCAACGGACCCTCTTTCTTTGCCTTGTGAGATCCGCTTCTCCTTTACTAAGACCACAGAGTTTCTCTACACTGCAGCCACCGGGTTGACTGAACTGCAACTTAAGGGTCTGGCTGATTGCAAGAAGAACTGGACAAATATTGATGATATCAATCGGGTGTTCTGCTCCAAACGGACTGACATATCAGACTATGTCCAGGAACATTGGAAGGAGGATGCTTTTTTTGGCTACCAGTATCTAAATGGTCTCAACCCCATGTTGATCCGACGTTGTTCAGCTCTGCCTGATAACTTTCCTGTCACTGACGACATGGTCTTCCGTCATGGTCAGGGTAGCTTGAGAAATGAAATGGAGAAAGGCAACATATTCCTGTGTGACTACAAGCTTTTGGATGGAGTCAAGGCAAACACCATCAATGGGAAGAAGCAGTACTTGATGGCTCCCCTCGTCCTGTTCCACAAAACACCTGATGATAAACTGATGCCTATTGCTATCCAGCTGAAGCAGACTCCAGCAGATGACAATCCCATCTTCTTTCCTACCGATTCTGAGTACGACTGGTTGATGGCCAAGATTTTTGTGAGAAGTGCAGATTTCAGTGAGCATCAACTCAATGTTCACCTGCTGCGCACTCATCTGCTGGCTGAAGTGTTTGCAGTGTCACTGCTGCGTAATGTGCCAATGGTGCATCCACTGTACAAGCTCCTCATACCTCACACTCGCTACACTCTGCAGATCAACTACTTAGCTCGAAGTCTTCTAATATCTGAGACTGGAGTTTTTAAACAGTTTGCAGCTTCTGGTGGAGAGGGTCTGATAACAATCCTGAAGAGATCACTGTCCTCAATGACCTACAGCTCCCTCTGCATACCAGAGGACATTGCTGAACGTGGTTTGGAGGCTGTGCCGAACTTCTACTACAGGGATGATGGACTCAAGCTTTGGGATATCATCCAAAGGTTTGTGCAGGGAGTGCTCAGCTTCTACTACAAGAATGATGCTGAGGTCCAGGAAGACTCCGAACTGCAGAAGTGGATTTCAGACATTTTTGAACATGGATTTCTTTCCCAAGCATGCACAGGAATTCCACAGAGCTTTACCACCGTGGTTGAGTTGGTCAAGTTTGTCACCATGGTGATCTTCACTTGCTCAGGACAGCACTCAGCTGTGAATACTGGACAGTATGACTATGATGGCTGGATGCCCAACACTCCCATCTCTCTGCAACTTCCTCCACCAACCACAAAGGGGAAAACAAGCAAGGCCATGATGCTGCAGACATTCCCTGACGTCAACACAACAGTTCATGGAATGGCCACCGTGTGGCTACTCAGCAAGCAGTCGTCTGACTTCGTCCCTCTTGGCCAATACCCAGAGGACCATTTCAGTGAGGAGATTCCCTGCAAGCTGATAAAGGATTTTCAAGCAAAGCTTGAAGGGTTAAGTGTGGTCATCAAAGCCAGAAACAAGAGCCTGGAGGTCCCATACACATACATGGATCCAACAGCGCTAGAAAACAGCGTGGCCATTTAAATAGCAGAAGGTGTGACCTCCTCAGCTGTTGGCCAAATTCAGTTTCATATTAACACAATTCTGATCTCACTGCTGATCTGCACAACAAACCAAGtctctctgactgtgagtccCAGCAGCTCTCAGATGATTAAaggacagtctgtctctctgagctgtgaggacgatgacagctctgctggatggactctgaggaggaacacaACCAGAGAAACCAGAGCTGAGTGTAAAGACATGGAAGGAATATCTGCTGGTTCTTCCTGTATCATCAGCTTCATGTTCCCATCGGACAGTGGAGTttactggtgtgagtccagagagggagcaaccagtaacagcatcaccatcactgtccctg

Function

NR:

description
arachidonate 12-lipoxygenase, 12R-type

GO: NA

KEGG:

id description
K08021 ALOX12B; arachidonate 12-lipoxygenase (R-type)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039822194.1 True 2279 mRNA 0.46 16 34952498 34962269
XR_005641491.1 False 2263 transcript 0.47 15 34953780 34967432

Neighbor

gene id symbol gene type direction distance location
LOC120572836 NA coding upstream 62328 34865071 ~ 34890170 (+)
LOC120572822 NA coding upstream 70194 34873685 ~ 34882304 (+)
LOC120572811 NA coding upstream 284654 34653680 ~ 34667844 (+)
LOC120572763 NA coding upstream 301082 34643006 ~ 34651416 (+)
LOC120572771 NA coding upstream 329363 34568896 ~ 34623135 (+)
LOC120572765 LOC101480284 coding downstream 44848 35012280 ~ 35022647 (+)
LOC120572630 NA coding downstream 60728 35028160 ~ 35032775 (+)
LOC120572841 NA coding downstream 90744 35058176 ~ 35065185 (+)
LOC120572778 NA coding downstream 133287 35100719 ~ 35181685 (+)
LOC120572631 NA coding downstream 145047 35112479 ~ 35117773 (+)
G148822 NA non-coding upstream 60878 34820778 ~ 34891620 (+)
G148797 NA non-coding upstream 214772 34678148 ~ 34737726 (+)
G148807 NA non-coding upstream 220904 34728439 ~ 34731594 (+)
G148777 NA non-coding upstream 395128 34509266 ~ 34557370 (+)
G148755 NA non-coding upstream 395406 34537069 ~ 34557092 (+)
LOC120573017 NA non-coding downstream 65344 35032776 ~ 35037939 (+)
G149100 NA non-coding downstream 78503 35045935 ~ 35049215 (+)
G149126 LOC106904641,LOC103129609,LOC105922223,LOC103371092 non-coding downstream 175154 35142586 ~ 35147864 (+)
G149127 NA non-coding downstream 183235 35150667 ~ 35154004 (+)
G149128 NA non-coding downstream 184678 35152110 ~ 35503528 (+)
LOC120572627 NA other upstream 54967 34808051 ~ 34897531 (+)
G148730 NA other upstream 151990 34775541 ~ 34800508 (+)
plod3 plod3,LOC103389255,LOC106511660,LOC100697420,LOC103371102 other upstream 480073 34428156 ~ 34472425 (+)
G148671 NA other upstream 1067599 33875923 ~ 33884899 (+)
LOC120573051 NA other upstream 1084616 33728371 ~ 33867882 (+)
LOC120572831 NA other downstream 105689 35073121 ~ 35088095 (+)
G149096 NA other downstream 155290 35122722 ~ 35128203 (+)
G149095 NA other downstream 168712 35136144 ~ 35142486 (+)
LOC120572790 NA other downstream 294720 35262152 ~ 35315419 (+)
G149172 NA other downstream 458817 35426249 ~ 35429043 (+)

Expression


Co-expression Network