LOC120572777 (LOC104964776)


Basic Information

Item Value
gene id LOC120572777
gene name LOC104964776
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 35324383 ~ 35329220 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039822210.1
ATGTCGGCTGACAGACTGAGCAGCGTGTCAAAGGAGGCGAAGCCAGAGAGCGTGTCGCTGTGTCCTCTGGACCCAGCAGCTGCCCCTGAGCAGGAGCTGCTGTGTATCTTTGGGACGGGAGACTTAGGGCGGTCTCTGGGTCAGCGTCTGCTCCATTCCGGCTACAGGGTGGTGTACGGCAGCCGCAGACCTCAGAGCTGTGGCCCCTTGCCTCAGGGAGCTCAGgCAATGAGCCACGAGGCAGCAGCCCAGTCAGCCAGTCTGGTCTTTCTTTGTATTCACAGAGAACACTATGACTTCCTGGAAAATCTTGCACCTCGACTCCAGGGAAAGGTGCTGGTGGACGTCAGCAACAACCTCAAGAAGAATCTGTACCCAGAGGCCAATGCTGAGTGCCTGCAGAGGATGATCCCTGGAGCTCATGTGGTGAAGGCTTTCAACACCTTGTCTGCATGGGCCCTGCAGAATGGACCCTCGGACGCCAATAGACAGGTGTACCTGTGTGGAAACGGTGCTGAGGCAAAGCAGGCGGTAGCAGAGGTGGCCACCAAACTTGGCTTTGCTGCCTTGGATAAAGGTTCTCTGTCAGCAGCCAGAGAGCTGGAGGAATTCCCACTGCAGCTGTTCCCAGAATGGAGGATGCCGCTGTACGTGGCCCTCGGCCTCACCGCCTTCATCTTTGTCTATGTGGTCATTAGAGAAGTCGTCTATGCGTATGTTGAACAGGGGGAAGACGACTCCTTTAGAATCATGGTGTCCCTGGCCAACAAGGTGTTTCCCATTGTGTCTCTCATCATGTTGTCTCTGTGTTACCTGCCTGGTGTCATAGCTGGCTTCATTCAGCTCTACATAGGCACCAAGTACAGGCGTTTTCCTGACTGGTTGGATCGCTGGATGCTGTGCAGGAAACAGCTGGGGCTGGTAGCACTTGGCTTTGCTTTTCTACATATGGTCTACACTCTCATCATCCCCATAAGATATTATGTGATATTCTGGAGTTCTGCTAATACCGTCTCAAAGATCAGGGAGAACCGAACGTCAGTGTTTGACACCACCACGGCCTGGCGTTCAGACTCCTACTACTCCATGGGGATTCTGGGATTTGGCCTGTTTCTCCTGTTGGGAATAACCTCTCTCCCCTCCGTCAGCAACGCTCTCAGCTGGAGGGAGTTCAGCTTCATACAGTCTAAGCTGGGATACCTGACAGTCTTCTTCTGTACCCTCCACACCTACCTGTACGGCTGGGACAAGTTCCTTCGTTCCTACAAGTGGCACATGCCTCCGGCCTACATGCTCTCTCTGTTGTTGCCTTCTGTGTTGCTAGTGCTCAagctgctgctcctcctgccCTGCGTGGACCGCAGCCTCACCCGCATTCGACAGGGCTGGGAGAGGACTGGGACGCAGGACGGCACTGGGAAACCACTGCTAACATAGAGACCATTACAGACGCAAAAACAATGGTGTACACTGAAAAaggccaacacaaagacaccaCAGTGGCTTGTCTTCTAAGAGCTCTATTATCAGATAACCCCAGCTCATTGGTTTGGATGTCATAGATCCGAGCTATGCAGTTTACACTTATggttctgctctctgttgtcaGCAAAGTCAACAAAGGCAATCGATTGAAACTACTTTCAGTCTCTCTTTGTGTGATCATCTTTGAATTGTTCCATTTTTTAAACATAGTCATACAATTGCACTGTGTATGCTTTTATCAGTTATACAAATACCTTAGAGCAGTGATCTCAAAGTAGGGTCCGGGGACCCCTAGGGCTCTGTGGCACTCTGCCAGGGGGTCCGTGAAAGGTTTCCAGATGAATCCATTTAAATCACCATGAcgttttctttctcttcacaAAAGGCTTCATAACTCAACGaatacaattataaaaataaagatttataATAGTTAATAGATTATGCAGCAAACTAACAAATCCTATAATCTGCAAATATGTTTAATACATGTCTAATACATATCTATTAAattttttctgtgttgtttttttatacataactAAGACTGTAGAAGTGTAAAAAATAGGCTTTGTCAAATTATTCCAAGGgatagacagagacagaatattttctattttgtaaggggtccttggttctAAAAAAGATAGAGAACCTCTGCCTTAGAGAATCTTAGACACACGCATTAAAGCAGCCTTATAGGATTTTAACACTATAGTTGAATCATTTCACAATAACCATGTACATCCAGTATTGTTAGAGAGTCTAACACTGAGGCAGGCAACTCTGTTGTAATTCCCTTAACATCAACAGCAAGAGTTTGACTTTCATTTCTCATCAACCTGCATCTACATGGTGGCTTTTGTTTAATCAATTCACTTTGTATACTTTTCTGTAAATTCAGATTTTTGGATCTTTTGTTCTTCCTTATTAATGTTGCTAAATGTCAAATGTAACCACTGTTCAATAAATTTCATTGTGACTGAA

Function

NR:

description
PREDICTED: metalloreductase STEAP4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039822210.1 True 2472 mRNA 0.47 10 35324383 35329220

Neighbor

gene id symbol gene type direction distance location
LOC120572797 LOC101882356 coding upstream 56563 35263468 ~ 35267820 (+)
LOC120572786 NA coding upstream 74693 35225746 ~ 35249690 (+)
LOC120572947 NA coding upstream 111946 35211322 ~ 35212437 (+)
LOC120572778 NA coding upstream 142698 35100719 ~ 35181685 (+)
LOC120572927 NA coding downstream 138616 35467836 ~ 35475658 (+)
LOC120573494 NA coding downstream 231230 35560450 ~ 35574268 (+)
LOC120573495 NA coding downstream 323782 35653002 ~ 35675644 (+)
LOC120572944 NA coding downstream 470505 35799725 ~ 35801933 (+)
LOC120572867 NA coding downstream 486673 35815893 ~ 35820447 (+)
LOC120573010 NA non-coding upstream 103708 35168089 ~ 35220675 (+)
G149129 NA non-coding upstream 161759 35155187 ~ 35162624 (+)
G149127 NA non-coding upstream 170379 35150667 ~ 35154004 (+)
G149126 LOC106904641,LOC103129609,LOC105922223,LOC103371092 non-coding upstream 176519 35142586 ~ 35147864 (+)
G149100 NA non-coding upstream 275168 35045935 ~ 35049215 (+)
G149180 NA non-coding downstream 130156 35459376 ~ 35459934 (+)
G149184 NA non-coding downstream 163984 35493204 ~ 35551942 (+)
LOC120572998 NA non-coding downstream 349586 35678806 ~ 35679539 (+)
G149211 NA non-coding downstream 371306 35700526 ~ 36038269 (+)
G149194 NA non-coding downstream 400670 35729890 ~ 36017601 (+)
LOC120572790 NA other upstream 8964 35262152 ~ 35315419 (+)
G149095 NA other upstream 181897 35136144 ~ 35142486 (+)
G149096 NA other upstream 196180 35122722 ~ 35128203 (+)
LOC120572831 NA other upstream 236288 35073121 ~ 35088095 (+)
LOC120572767 LOC101480284,LOC102312368,LOC100706304,LOC102797228,LOC101468181 other upstream 356951 34952498 ~ 34967432 (+)
G149172 NA other downstream 97029 35426249 ~ 35429043 (+)
G149187 NA other downstream 458899 35788119 ~ 36262372 (+)
LOC120572849 NA other downstream 788078 36117298 ~ 36130103 (+)
LOC120572889 NA other downstream 1010411 36339631 ~ 36343826 (+)
LOC120572806 NA other downstream 1135241 36464461 ~ 36476242 (+)

Expression


Co-expression Network