LOC120572778


Basic Information

Item Value
gene id LOC120572778
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 35100719 ~ 35181685 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039822211.1
GGCTGTCCCGGGgtgaaaactaaacagaaaaagGCGGGGATAGTTTCTTTGTGTAGGCAGCAACGTGAAGAAAACAAACGTACCCGGGAACACGGTGCAGGGCGAGGAGACGGAACGAGGTCGGCACATGAAGTTAGCAGACAGTTAGCATGGACTCTACAGGACAATATTCCTAACCTGGAGGAATTCTTTCCATCTGTGGACACTTCCGGACTACAGGAATATTAATAAGACAGGAAAGGACGGGGACTGTTTTAGGACAGACTCCAGCTCCTCTGTGGGACGAGACCCTTCTGACTTCAGGACGTCCGTCTGAATTAGTTCCCCCTGAAGAACAAGAATGAGTTCTCCACAAAAGCTCATCTGTGGGACGAGACCCTTCTGACTTCAGGACGTCCGTCTGAATTAGTTCCCCCTGAAGAACAAGAATGAGTTCTCCACAAAAGAAAccgagaggaagaggagaaaaacgtcaccactgtcagtactgtgacaaatccttcacaacatcaggatatttaaagattcatcagagagttcacactggagaaaagccgtacagctgtgatcaatgtggggcaactttcacacaacagagtaacctaaaaacacatcaaagcattcacactggagacaaacctcacagctgtgatcaatgtggggcagcttttaCACTACAGAGACACCTAAAAagccatcaacgcattcacactggagagaagccgtacagctgtgatcaatgtggggcagctttcacacaccAGGTTGCCCTTAAaacacatcaacgcattcatactggagagaagccatatagctgtgatcaatgtggggcatcTTTCAGACAACAGAGTAACCTAGAAAACCATcgacgcattcacactggagagaagccttacagctgtggtaaatgtggggcagctttcacacaaaaGGGAGACCTTAAAactcaccagcgcattcacactggagagaagccatacagctgtgaacaatgtggaGAAACCTTTTCTCAAAGTAGTaaccttaaatctcaccagcgcattcacactggagagaagccgtacagctgtgaacaatgtggaGAAACCTTTTCTCAAAGTAGTaaccttaaatctcaccagcgcactcacactggagagaagccgtacagctgtaaACAATGTGGGGAAGCTTTTTCTCAAAGTGGTGCCCTTAAATCTCACCATCAGCGTATTCACACTGGacagaagccgtactggtgtgaacaatgtgggaaaaccttttctcagagtGGTGATCTTAAATCTCAcgagcgcattcacactggagagaagccgtacagctgtgaacaatgtgggaccTTTTCTCATGGTGGCAGCCTGAAATCTCACCAGCGCactcacactggagagaagccgtacagctgtgaacaatgtggaaAAACTTTTTCTCAGAGTAGTGAACTTAAAGTAcaccaacgcattcacactggagagaagccctacagctgtgaacaatgtgggaaatgtTTTTCTCAGAGTAGTAACCTTAGATCTCACCAGCGCACTCACACTGGAGaaaagccgtactggtgtgaacaatgtggaaaAACCTTTTCTCATAGTGAGAACCTTAAACaacaccagcgcattcacactggagagaagtcGTAtagctgtgaacaatgtggaaAAACATTTTCTCGTGGTGATAcccttaaatctcaccagcgcattcacactggagagaagccgtacagctgtgaacaatgtgggaaaacgttTTCTCAGAGTAGTCACCTTAAATCTCATCAACAGCGCTATCATACTGCCCCGTTGTGAACATGTTTACTACGAGGCGGTTTAACAAGTTTAAAGGCTCggacacaccaacctgacagCTAaccttcggcagaaaaggcagttggactgactgcctccccgagttggtcaaaaaaaattgcaaaacaCACCGTCATTTTGGCCAGCCTTTTAAATCCAGCGACTACCATAGTATCATATAATTAGACCACGCCCCAACCTCCCTTGATCTCTACTTTCGTGCTCACTCTAACCCCTTCAAGCAGTGGAGGTTTAATTCCTCTCTACTAGTGGAGGATTACTATAAGCGATTCTTAAACTCTCAAATCACTCTATTCTTTGAGCTGAATGACCTGTCGGACACAAACAGAGGCGTATTATGGGAGGCTTCTAAAGCTTGTGTCAGAGGATagcttattttctgtgtttctaATTTAAAAAGAGGCGAAATGTCCTGAACGGCCGGAAATAAAGGACATCGATGTCAAACACACAGCTGGCCCAGACCCTATCCTTTACAGGGAACGTctaacccccaatttccactGGCTACGTAATGGCTACGTAATGGCTACgtaacggcggcggagtcatcaGGTTTccattcaagtcaatgtgtgtatttccactgacagcagaacggctgcgttcctccggcggtccgcagcagatacacagagcttctatttttgccggacgcatTTACATCTCTGCTAGCCCGGAGACCTATCTTGTTCAACTGGAAGctctcccacccccccacacGTGACCTTTGGATTAAAGAGGTGCTCGACAGTTTGAAGCTCAGATATTCTCTGAAAGGCTCTATCACGACATTCCTAGAGACATGGAACCCCTTCCTAGAACTCGTTCACTCCCTTACTTTATCTCCTGACTCGGAGGACTGAGCTCCTTCTGCACTGCTCTACTTGACGCAATCTGCCATTTATTATTTGTAGTTTAACATCTTTTCTTACTTTGTGTACCTTACATTTAATAatctatattttacattttatattaactctttgtattttctgtctctGAATGTGGTTTTAGATCTGTTGAGTTTTGTTCACTGTAAAAACGAgaacttgaaattgctcatcttactttgattttcaatGAAATTGAAGAAATAAATATGTAATGACAATGTCAACTTTGTTAAAGGAGTTACTTCAACTAATTGTATTAAGTTTCTTGTGATAAGTTGTTCTCACTGCAAAATGTCTGGTGGCGCAACTTTGAAATTGTAGTTGGACTCAAGTTGAGGCCAGGTCAAGTAGTCTGTGCATGCTTCATGCTAAGAACAGGGTTTCTGAGCAGTTCTGCAGGGGTTTTCATAGACGACTTCTGGTTCTGCAGATTTATTTAATCAGATCTTCTTGTTCTCTTTAGTGTTTGTGTTCAAACTCTAAATGTTTGACAAGTTGTTCTGCAATCGCAATACAAGCAAGCAGAGGTATATATTGGAACAAAAAGACATTGTAGTGAATACATAAGTCACAAAGATTAATCAGAAGATCAGCTGTTCCTCTTGATCTGTTTGGTCCGATCACTATTACCTGTTAGGGTAATTCTACTGCAGTACGTAATACAAAAATagtaagggtgtgacgagatctcgttttacgagatctcgcgtgacgagatttctcgtcgaggtgaaaagagtgaaagagtgacagac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039822211.1 True 3492 mRNA 0.44 5 35100719 35181685

Neighbor

gene id symbol gene type direction distance location
LOC120572841 NA coding upstream 35534 35058176 ~ 35065185 (+)
LOC120572630 NA coding upstream 67944 35028160 ~ 35032775 (+)
LOC120572765 LOC101480284 coding upstream 78072 35012280 ~ 35022647 (+)
LOC120572836 NA coding upstream 210549 34865071 ~ 34890170 (+)
LOC120572822 NA coding upstream 218415 34873685 ~ 34882304 (+)
LOC120572947 NA coding downstream 29637 35211322 ~ 35212437 (+)
LOC120572786 NA coding downstream 44061 35225746 ~ 35249690 (+)
LOC120572797 LOC101882356 coding downstream 81783 35263468 ~ 35267820 (+)
LOC120572777 LOC104964776 coding downstream 142698 35324383 ~ 35329220 (+)
LOC120572927 NA coding downstream 286151 35467836 ~ 35475658 (+)
G149100 NA non-coding upstream 51504 35045935 ~ 35049215 (+)
LOC120573017 NA non-coding upstream 62780 35032776 ~ 35037939 (+)
G148822 NA non-coding upstream 209099 34820778 ~ 34891620 (+)
G148797 NA non-coding upstream 362993 34678148 ~ 34737726 (+)
G149180 NA non-coding downstream 277691 35459376 ~ 35459934 (+)
G149184 NA non-coding downstream 311519 35493204 ~ 35551942 (+)
LOC120572998 NA non-coding downstream 497121 35678806 ~ 35679539 (+)
G149211 NA non-coding downstream 518841 35700526 ~ 36038269 (+)
G149194 NA non-coding downstream 548205 35729890 ~ 36017601 (+)
LOC120572831 NA other upstream 12624 35073121 ~ 35088095 (+)
LOC120572767 LOC101480284,LOC102312368,LOC100706304,LOC102797228,LOC101468181 other upstream 133287 34952498 ~ 34967432 (+)
LOC120572627 NA other upstream 203188 34808051 ~ 34897531 (+)
G148730 NA other upstream 300211 34775541 ~ 34800508 (+)
plod3 plod3,LOC103389255,LOC106511660,LOC100697420,LOC103371102 other upstream 628294 34428156 ~ 34472425 (+)
LOC120572790 NA other downstream 80467 35262152 ~ 35315419 (+)
G149172 NA other downstream 244564 35426249 ~ 35429043 (+)
G149187 NA other downstream 606434 35788119 ~ 36262372 (+)
LOC120572849 NA other downstream 935613 36117298 ~ 36130103 (+)
LOC120572889 NA other downstream 1157946 36339631 ~ 36343826 (+)

Expression


Co-expression Network