LOC120572786


Basic Information

Item Value
gene id LOC120572786
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 35225746 ~ 35249690 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039822224.1
GATTGACGTGTTGATAGCCAATGAGAGCTGTTTCTAAGATGGCTGCTCAGAGAGATGACGCAGCGTATTGGCGCTCCACAGTGGGAGCGCTTGCTGTACGTCGGGGGCTGTCCCGGGgtgaaaactaaacagaaaaagGCGGGGATAGTTTCTTTGTGTAGGCAGCAACGTGAAGAAAACAAACGTACCCGGGAACACGGTGCAGGGCGAGGAGACGGAACGAGGTCGGCACATGAAGTTAGCAGACAGTTAGCATGGACTCTACAGGACAATATTCCTAACCTGGAGGAATTCTTTCCATCTGTGGACACTTCCGGACTACAGGAATATTAATAAGACAGGAAAGGACGGGGACTGGAGGTTTAGGACAGACTCCAGCTCATCTGTGGGACGAGACCCTTCTGACTTCAGGACGTCCGTCTGAATTAGTTCCCCCTGAAGAACAAGAATGAGTTCTCCACAAAAGGGGGTCGTTCCTGACGAAGAAACAAGACCAGGCAGTGAGGAAGATCATGAGGTTCCTGAGATGCTGcagacacagAAAccgagaggaagaggagaaaaacgTCACCGCTGTCAGCACTGTGACAAGTCCTTCACAAATTCAACCTctttaaagattcatcagagacttcacactggagagaaaccttacagctgtgatcttTGTGGGTCAGCTTTCAAACAACAGAGTAacctaaaaacacatcaacgcattcacactggagaaaaACCTTACCGCTGTGATCTATGTGGGACAGCTTTCAGACAACAGGGACAGCTAAAAagccatcaacgcattcacactggagagaagccgtacagctgtgaacaatgtggggaaAAGTTTTCTCGAAGTAGTTACCTTAAATCTcaccaacgcattcacactggagagaagccgtacagctgtgatcactGTGGGGAAAAGTTTTCTCGAAGTAGTGcccttaaatctcaccagcgcattcacaccggagagaagccgtacagctgtgaacaGTGTGGGGAAACTTTTTCTCAACGAAGTAACCTAAAATatcaccagcgcattcacactggagagaagccgtactggtgtgaacaatgtggtgAAACGTTTTCTCAGAGTACTAGacttaaatctcaccagcgcattcacactggagagaagccgtacatcTGTGATCAATGTGGTGAAACGTTTTCTCAGAGTACTAGacttaaatctcaccagcgcattcacactggagagatgccgtactggtgtgatcaatgtggggaaATGTTTTCTCAGAGTAGTCACCTTAAAAGACACAAgctcattcacactggagagaggccgtactggtgtgatcaatgtggggaaATGTTTTCTCAGAGTAGGTACCTTAAAAGACACAAgctcattcacactggagagaagccgtactggtgtgatcaatgtgggaaaATGTTTTCTCATAGTAGTaaccttaaatctcaccagcgcattcacactggagagaagccgtacggctgtgatcaatgtggggaagtgttttctcagagtagtaaccttaaatctcaccagcgcattcacactggagagaagccgtacagctgtgatcaatgtggtgAAACTTTTTCTCGTGGTGATACCCTTAAAAAACACcagcgtgttcacactggagagaagccgtactggtgtgaacaatgtgggaaaatgtTTTCTCAGAGTGGTAGCCTTAGAACTCACCAGCGCACTCACACTGCCTTGTAGTGAACATGTTTCAGAGCTAGGCCTATAGTCAATaggcgatagtcaataaatcaaataatcgcacgataaaaaaatGAACTCGATAATTTTTCttgccgcgataatttccatttgcatacttgtttgttttcctctctctctctctctctctctctctacctctctaccaaagagactggatgaCCACTCTCTGTTCCTTAGTGTAAcaaggagtgaaccctctttgTCAGTCACATGGTCTTTGTGTGGGGAGGCGGGACTACTCCTGACAGAGAGTTGGATCAGGGTTTCCaacagcactttgcagttaaggtgCAATCAAAAACCACATTGAAATAGATGGATatcatttattaattatatattttttacatttaatatttagtgtttcataaataattgttaaatgtagtacagTCTTTAGTCTATCTCACAAACACTCGAGGAATGCTGCAAACATTTGACAGCCAGTACGAATTGCCTGgagaacatactgtatgtcacaaacagcaattccacaactgtccAACAGCGTGAaagtttagaaataaaagtttattgatctttgaaaaggggtacctgcattattatgccattatcattatcttagatgaaaatggtctcagaaCAACAATATTATAACAActctgagttgaagtttaaaactttcacagccattttaataaaatgaaggattATATTCGGGCttgagtccatacatgcagttaatggatgcAGGCACGCAGATCTGAAGGCTTGGTTAGCTCccatataaagatatggagtggaggagctgccactgagaggggtaacaatcagactgataaatgacgttcggggagctttcacagcaagCGAcgttattagtacagttaatcccaaaTATCGAATAGCAATATTTGGGAAagaaatcgcaattagattattttcaaaaatcgttcagccctagtgaCAGGCCTATTCCGAGCCAAGCTGTTTcttcctgcctcctcctcatgccctgatagctgtgttgttatATTCTCATCTTCTCTCCCcattgaaggctgaccagcAGTAACTTGATCTTCTGAACACTATGGACCAGTATGTTATCCTGGCTATGACTACATATTACACTCCCTCCCTTTGAAGGGATAGTCCTGTCAGTCATGTAAATAGTTTTAACCCTCTGCTTTGAACCGTATCCCACAGGCTTCTTTAGTGGATCAGATTTCAGTCTGACACTTGAGTCACATTAAAACAGCTGGTTAGATTCAGGGGGAAGTTTAAGAGCTGAAGAAGGCTGTGGAATTTGGTCAAAAGCTCCAAATGAGAGAATGTGAGCCTTGTGTTGAGAATGATCTGTTAAAGATTTgttcccattatttttttctgccttatacatattcttttttattatttgtagtTTAAAATGATCTTTTCTTACTTTGTGGACctttcatttaataataatttacattgtatattaactctttgtattttctgtctctCAATGTGGTTTAAGATCTGTTGAGTTTTGTTCACTGTAAAAACGAGAACATTAAATTGTtcatcttactt
>XM_039822225.1
ACGTGTTGATAGCCAATGAGAGCTGTTTCTAAGATGGCTGCTCAGAGAGATGACGCAGCGTATTGGCGCTCCACAGTGGGAGCGCTTGCTGTACGTCGGGGGCTGTCCCGGGgtgaaaactaaacagaaaaagGCGGGGATAGTTTCTTTGTGTAGGCAGCAACGTGAAGAAAACAAACGTACCCGGGAACACGGTGCAGGGCGAGGAGACGGAACGAGGTCGGCACATGAAGTTAGCAGACAGTTAGCATGGACTCTACAGGACAATATTCCTAACCTGGAGGAATTCTTTCCATCTGTGGACACTTCCGGACTACAGGAATATTAATAAGACAGGAAAGGACGGGGACTGGAGGTTTAGGACAGACTCCAGCTCATCTGTGGGACGAGACCCTTCTGACTTCAGGACGTCCGTCTGAATTAGTTCCCCCTGAAGAACAAGAATGAGTTCTCCACAAAAGGGGGTCGTTCCTGACGAAGAAACAAGACCAGGCAGTGAGGAAGATCATGAGGTTCCTGAGATGCTGcagacacagAAAccgagaggaagaggagaaaaacgTCACCGCTGTCAGCACTGTGACAAGTCCTTCACAAATTCAACCTctttaaagattcatcagagacttcacactggagagaaaccttacagctgtgatcttTGTGGGTCAGCTTTCAAACAACAGAGTAacctaaaaacacatcaacgcattcacactggagaaaaACCTTACCGCTGTGATCTATGTGGGACAGCTTTCAGACAACAGGGACAGCTAAAAagccatcaacgcattcacactggagagaagccgtacagctgtgaacaatgtggggaaAAGTTTTCTCGAAGTAGTTACCTTAAATCTcaccaacgcattcacactggagagaagccgtacagctgtgatcactGTGGGGAAAAGTTTTCTCGAAGTAGTGcccttaaatctcaccagcgcattcacaccggagagaagccgtacagctgtgaacaGTGTGGGGAAACTTTTTCTCAACGAAGTAACCTAAAATatcaccagcgcattcacactggagagaagccgtactggtgtgaacaatgtggtgAAACGTTTTCTCAGAGTACTAGacttaaatctcaccagcgcattcacactggagagaagccgtacagctgtgatcaatgtggtgAAACTTTTTCTCGTGGTGATACCCTTAAAAAACACcagcgtgttcacactggagagaagccgtactggtgtgaacaatgtgggaaaatgtTTTCTCAGAGTGGTAGCCTTAGAACTCACCAGCGCACTCACACTGCCTTGTAGTGAACATGTTTCAGAGCTAGGCCTATAGTCAATaggcgatagtcaataaatcaaataatcgcacgataaaaaaatGAACTCGATAATTTTTCttgccgcgataatttccatttgcatacttgtttgttttcctctctctctctctctctctctctctacctctctaccaaagagactggatgaCCACTCTCTGTTCCTTAGTGTAAcaaggagtgaaccctctttgTCAGTCACATGGTCTTTGTGTGGGGAGGCGGGACTACTCCTGACAGAGAGTTGGATCAGGGTTTCCaacagcactttgcagttaaggtgCAATCAAAAACCACATTGAAATAGATGGATatcatttattaattatatattttttacatttaatatttagtgtttcataaataattgttaaatgtagtacagTCTTTAGTCTATCTCACAAACACTCGAGGAATGCTGCAAACATTTGACAGCCAGTACGAATTGCCTGgagaacatactgtatgtcacaaacagcaattccacaactgtccAACAGCGTGAaagtttagaaataaaagtttattgatctttgaaaaggggtacctgcattattatgccattatcattatcttagatgaaaatggtctcagaaCAACAATATTATAACAActctgagttgaagtttaaaactttcacagccattttaataaaatgaaggattATATTCGGGCttgagtccatacatgcagttaatggatgcAGGCACGCAGATCTGAAGGCTTGGTTAGCTCccatataaagatatggagtggaggagctgccactgagaggggtaacaatcagactgataaatgacgttcggggagctttcacagcaagCGAcgttattagtacagttaatcccaaaTATCGAATAGCAATATTTGGGAAagaaatcgcaattagattattttcaaaaatcgttcagccctagtgaCAGGCCTATTCCGAGCCAAGCTGTTTcttcctgcctcctcctcatgccctgatagctgtgttgttatATTCTCATCTTCTCTCCCcattgaaggctgaccagcAGTAACTTGATCTTCTGAACACTATGGACCAGTATGTTATCCTGGCTATGACTACATATTACACTCCCTCCCTTTGAAGGGATAGTCCTGTCAGTCATGTAAATAGTTTTAACCCTCTGCTTTGAACCGTATCCCACAGGCTTCTTTAGTGGATCAGATTTCAGTCTGACACTTGAGTCACATTAAAACAGCTGGTTAGATTCAGGGGGAAGTTTAAGAGCTGAAGAAGGCTGTGGAATTTGGTCAAAAGCTCCAAATGAGAGAATGTGAGCCTTGTGTTGAGAATGATCTGTTAAAGATTTgttcccattatttttttctgccttatacatattcttttttattatttgtagtTTAAAATGATCTTTTCTTACTTTGTGGACctttcatttaataataatttacattgtatattaactctttgtattttctgtctctCAATGTGGTTTAAGATCTGTTGAGTTTTGTTCACTGTAAAAACGAGAACATTAAATTGTtcatcttactt

Function

GO: NA

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039822224.1 True 3304 mRNA 0.43 4 35225746 35249690
XM_039822225.1 False 2879 mRNA 0.42 5 35225751 35249690

Neighbor

gene id symbol gene type direction distance location
LOC120572947 NA coding upstream 13309 35211322 ~ 35212437 (+)
LOC120572778 NA coding upstream 44061 35100719 ~ 35181685 (+)
LOC120572935 NA coding upstream 92637 35130259 ~ 35133109 (+)
LOC120572631 NA coding upstream 107973 35112479 ~ 35117773 (+)
LOC120572841 NA coding upstream 160561 35058176 ~ 35065185 (+)
LOC120572797 LOC101882356 coding downstream 13778 35263468 ~ 35267820 (+)
LOC120572777 LOC104964776 coding downstream 74693 35324383 ~ 35329220 (+)
LOC120572927 NA coding downstream 218146 35467836 ~ 35475658 (+)
LOC120573494 NA coding downstream 310760 35560450 ~ 35574268 (+)
LOC120573495 NA coding downstream 403312 35653002 ~ 35675644 (+)
LOC120573010 NA non-coding upstream 5071 35168089 ~ 35220675 (+)
G149129 NA non-coding upstream 63122 35155187 ~ 35162624 (+)
G149127 NA non-coding upstream 71742 35150667 ~ 35154004 (+)
G149126 LOC106904641,LOC103129609,LOC105922223,LOC103371092 non-coding upstream 77882 35142586 ~ 35147864 (+)
G149100 NA non-coding upstream 176531 35045935 ~ 35049215 (+)
G149180 NA non-coding downstream 209686 35459376 ~ 35459934 (+)
G149184 NA non-coding downstream 243514 35493204 ~ 35551942 (+)
LOC120572998 NA non-coding downstream 429116 35678806 ~ 35679539 (+)
G149211 NA non-coding downstream 450836 35700526 ~ 36038269 (+)
G149194 NA non-coding downstream 480200 35729890 ~ 36017601 (+)
G149095 NA other upstream 83260 35136144 ~ 35142486 (+)
G149096 NA other upstream 97543 35122722 ~ 35128203 (+)
LOC120572831 NA other upstream 137651 35073121 ~ 35088095 (+)
LOC120572767 LOC101480284,LOC102312368,LOC100706304,LOC102797228,LOC101468181 other upstream 258314 34952498 ~ 34967432 (+)
LOC120572627 NA other upstream 328215 34808051 ~ 34897531 (+)
LOC120572790 NA other downstream 12462 35262152 ~ 35315419 (+)
G149172 NA other downstream 176559 35426249 ~ 35429043 (+)
G149187 NA other downstream 538429 35788119 ~ 36262372 (+)
LOC120572849 NA other downstream 867608 36117298 ~ 36130103 (+)
LOC120572889 NA other downstream 1089941 36339631 ~ 36343826 (+)

Expression


Co-expression Network