LOC120572841


Basic Information

Item Value
gene id LOC120572841
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 35058176 ~ 35065185 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039822326.1
CGTGATGACAGTTTGAATGCAGAGAGGAGCAACGGCTCAGAGAGCTTCTGACTTCTGCAGAAACTTCAACAAGACGGAGAGAAGTCTTCATCTTtaaagacagacatacagacagacaggcagacagacagatcgCCGTGATGGCAGACTACTACAACGAGAGGGAACAGGACAGCAGCACTCTCTGGATCAAAGAGcctgtatctgtctctctctcagctgtctCCAGGTTCAGACGCTGGTTGTTTCCTGCTCTGACAGCTACATTCATCCTGGTTCTGATCATAGCACTGGGAGCTAGCAACACGAAGACATGGAATCGTCTGTGGTCTGTGGAGCAGAGTGTCAGCAACCTGAGCCACGTCATCCAATCACTGAACACCTCTCTGCAGCACGCTcaggAAACATCTAAGCAGGTTCACCAGCTGCAGGTTGCTatggacaacaacaaaaacgagCTCATGTCAGtggcCGAGGCGTTGAAGCAGCTGGCAGTCATCGACTCTCTCAGCCGGAGCGTCTATTCGCTCAAATGTTCCCTCGAACGGATCATCAAcaatagctcTGCAGAGAGCATGTGTTGTCCTCCAGGTTGGGATGAGTTTGGTTCCAGCTGCTACTTCTTCAGCCGTGACTCTCGGTCCTGGAACGAGTCCAGAGTCTGGTGTGAGAAACGCAACGCTCACCTGCTCATACTGCAGGACGACAAGACCTGGgacTTTGTGACTCGTCGTACGGTTCCCCTGGTGTACTGGGTGGGTCTGTCTGACTGGAGAACCGGCCGCTGGGAGTGGATCAACCAGACACCGTACACCATGGAGCGCAGGCGCTGGGAGATCGGTCAGCCTGACAGCTGGACCGAACACGGTCTCGGCCCCGGAGACGAAGACTGTGCTCAACTGTATTACACTGGACGCCTCAACGACATCCACTGCTCCACCGCCATGCGCTACATCTGCCAGAAACACGGCACGCACGCCTGAACAATATCTGGAACCCAAACAC

Function

GO: NA

KEGG:

id description
K06721 CLEC10A, CLECSF13, CLECSF14, CD301; C-type lectin domain family 10 member A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039822326.1 True 1005 mRNA 0.54 9 35058176 35065185

Neighbor

gene id symbol gene type direction distance location
LOC120572630 NA coding upstream 25401 35028160 ~ 35032775 (+)
LOC120572765 LOC101480284 coding upstream 35529 35012280 ~ 35022647 (+)
LOC120572836 NA coding upstream 168006 34865071 ~ 34890170 (+)
LOC120572822 NA coding upstream 175872 34873685 ~ 34882304 (+)
LOC120572811 NA coding upstream 390332 34653680 ~ 34667844 (+)
LOC120572778 NA coding downstream 35534 35100719 ~ 35181685 (+)
LOC120572631 NA coding downstream 47294 35112479 ~ 35117773 (+)
LOC120572935 NA coding downstream 65074 35130259 ~ 35133109 (+)
LOC120572947 NA coding downstream 146137 35211322 ~ 35212437 (+)
LOC120572786 NA coding downstream 160561 35225746 ~ 35249690 (+)
G149100 NA non-coding upstream 8961 35045935 ~ 35049215 (+)
LOC120573017 NA non-coding upstream 20237 35032776 ~ 35037939 (+)
G148822 NA non-coding upstream 166556 34820778 ~ 34891620 (+)
G148797 NA non-coding upstream 320450 34678148 ~ 34737726 (+)
G148807 NA non-coding upstream 326582 34728439 ~ 34731594 (+)
G149126 LOC106904641,LOC103129609,LOC105922223,LOC103371092 non-coding downstream 77401 35142586 ~ 35147864 (+)
G149127 NA non-coding downstream 85482 35150667 ~ 35154004 (+)
G149128 NA non-coding downstream 86925 35152110 ~ 35503528 (+)
G149129 NA non-coding downstream 90002 35155187 ~ 35162624 (+)
LOC120573010 NA non-coding downstream 102904 35168089 ~ 35220675 (+)
LOC120572767 LOC101480284,LOC102312368,LOC100706304,LOC102797228,LOC101468181 other upstream 90744 34952498 ~ 34967432 (+)
LOC120572627 NA other upstream 160645 34808051 ~ 34897531 (+)
G148730 NA other upstream 257668 34775541 ~ 34800508 (+)
plod3 plod3,LOC103389255,LOC106511660,LOC100697420,LOC103371102 other upstream 585751 34428156 ~ 34472425 (+)
G148671 NA other upstream 1173277 33875923 ~ 33884899 (+)
LOC120572831 NA other downstream 7936 35073121 ~ 35088095 (+)
G149096 NA other downstream 57537 35122722 ~ 35128203 (+)
G149095 NA other downstream 70959 35136144 ~ 35142486 (+)
LOC120572790 NA other downstream 196967 35262152 ~ 35315419 (+)
G149172 NA other downstream 361064 35426249 ~ 35429043 (+)

Expression


Co-expression Network