LOC120572927


Basic Information

Item Value
gene id LOC120572927
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 35467836 ~ 35475658 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039822452.1
aagattcatcagagagttcacactggagagaatctacacagctgtgatcaatgtggggcagctttcacactacACAGTACCCTAAAAaaccatcaacgcattcacactggagagaagccatacagctgtgatcaatgtggggcagctttcacactacAGGGTAACCTAAAaagacatcaacgcattcacactggagagaagccgtacagctgtgatcaatgtgggtcAGCTTTCACACTACAGGAACACCTAAAATTACATCAACGTATTcatactggagagaagccgtacagctgtgatcaatgtggaaAAACTTTTTCTCTGAGTCGTAACCTTGTACGCCACCGActtgttcacactggagagaagccgtactggtgtgaacaatgtggaaaAACTTTTTCTCTGAGTAGTAACCTTGAATGCcaccgacgtgttcacactggagagaagccgtacagctgtgatcagtGTGGCCAAACGTTTTCTCAGAGTAGGAGTCTTGAAATTcaccgacgtgttcacactggagagaagccgtactgctgtgatcagtGTGGGGCAACTTTTTCTCAGAGTAGTCACCTTGAAAACcaccgacgtgttcacactggagagaagccgtactggtgtgaacaatgtggggaaACATTTTCTCGGATTGGTAGCCTTAAAAgacaccagcgcattcacactggagataaacctTACCGCTGTGATTTATGTGGTAAAACCTTTGCTGAGAGTGGTAGCCTAGAAAGCCACCGacatgttcacactggagaaaagccgtactggtgtgaacaatgtgggaaatcTTTTTCTCAGAGTAGAAGCCTTAAAAGACACCAgctcattcacactggagagaagccgtacagctgcgatcaatgtgggaaaactttttctaGGAGTGGTCACCTAGAAAGCCAtcgacgtgttcacactggagagaagccgtactggtgtgaacaatgtgggaaaactttttctcacAGTAGTAGCCTTAAATatcaccagcgcattcacactggagagaagccgtactggtgtgaacaatgtgggaaaactttttctcagagTGGGAGCCTTAAAAGACACCAGCGCCTTCACACTGCCTCGTAGTGAACATGTTTCCGAGCCAAGCTGTTTcatcctgcctcctcctcatgccctgatagctgtgttgttatattctgatcttctctccacattgaaggctgaccagcAGTAACTTGATCTtctgaacagcatggatgttatCCTGGCTACGACTACATATTACACTCCCTCCCTTTGAAAGGATTCATTTCACtcaaaattagcttttttttcctgtaataCAATATGTTGAG

Function

GO: NA

KEGG:

id description
ko03460 Fanconi anemia pathway
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039822452.1 True 1355 mRNA 0.45 2 35467836 35475658

Neighbor

gene id symbol gene type direction distance location
LOC120572777 LOC104964776 coding upstream 138616 35324383 ~ 35329220 (+)
LOC120572797 LOC101882356 coding upstream 200016 35263468 ~ 35267820 (+)
LOC120572786 NA coding upstream 218146 35225746 ~ 35249690 (+)
LOC120572947 NA coding upstream 255399 35211322 ~ 35212437 (+)
LOC120572935 NA coding upstream 334727 35130259 ~ 35133109 (+)
LOC120573494 NA coding downstream 84792 35560450 ~ 35574268 (+)
LOC120573495 NA coding downstream 177344 35653002 ~ 35675644 (+)
LOC120572944 NA coding downstream 324067 35799725 ~ 35801933 (+)
LOC120572867 NA coding downstream 340235 35815893 ~ 35820447 (+)
LOC120572637 LOC103389327,LOC101480196 coding downstream 895221 36370879 ~ 36401016 (+)
G149180 NA non-coding upstream 7902 35459376 ~ 35459934 (+)
LOC120573010 NA non-coding upstream 247161 35168089 ~ 35220675 (+)
G149129 NA non-coding upstream 305212 35155187 ~ 35162624 (+)
G149127 NA non-coding upstream 313832 35150667 ~ 35154004 (+)
G149126 LOC106904641,LOC103129609,LOC105922223,LOC103371092 non-coding upstream 319972 35142586 ~ 35147864 (+)
G149184 NA non-coding downstream 17546 35493204 ~ 35551942 (+)
LOC120572998 NA non-coding downstream 203148 35678806 ~ 35679539 (+)
G149211 NA non-coding downstream 224868 35700526 ~ 36038269 (+)
G149194 NA non-coding downstream 254232 35729890 ~ 36017601 (+)
G149212 NA non-coding downstream 299226 35774884 ~ 36318736 (+)
G149172 NA other upstream 38793 35426249 ~ 35429043 (+)
LOC120572790 NA other upstream 152417 35262152 ~ 35315419 (+)
G149095 NA other upstream 325350 35136144 ~ 35142486 (+)
G149096 NA other upstream 339633 35122722 ~ 35128203 (+)
LOC120572831 NA other upstream 379741 35073121 ~ 35088095 (+)
G149187 NA other downstream 312461 35788119 ~ 36262372 (+)
LOC120572849 NA other downstream 641640 36117298 ~ 36130103 (+)
LOC120572889 NA other downstream 863973 36339631 ~ 36343826 (+)
LOC120572806 NA other downstream 988803 36464461 ~ 36476242 (+)
G149584 NA other downstream 1461748 36937406 ~ 36938142 (+)

Expression


Co-expression Network