arhgef11 (arhgef11)


Basic Information

Item Value
gene id arhgef11
gene name arhgef11
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 19679255 ~ 19702223 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039822512.1
cttttgaaCGTAATGATCGTTGAGAATATGGTGGTGGACCAGCAGCCAGTCAAGGCAGCAGGATAACAACACAGCAGAGATCATTATTTGAAGAACCGGGATTTAAACACAATAAATGTATGCAACGATAACTTCTGAGTCTTCTGGTAGACCACGTGAGAGAGAAGCAAATCCGGATTCACCACTGTGACTTGTTTTGGGAAAAAAAGACCTAAGGTGGAGCTTTTACTCGTATTGCattctagctaacgttagctggctaACATGCAGCTTTAGTGTCTGAATTTGCACGAAAACGAGACTCTGGGATATATCGAGCTGGAATTTGCATGGACTGCCACTACCTCGACTACTTCAACACTCAACTATTAGCATGCAGTTAAGACCATGCTGGCCTTTCACTTTGCAGACATAGCTGGTTAGCTAGCTACCTCTAAAGGGCCGACTCGTTAGCGCAGCTGGAAGCCGAACTCACGGCGCTTTTGGTCGGCCAGAGGAACAACGCCATGCCGCGGGTTGAAATCGGCCCACCCGTAGAGCTAACTTCAGGAAGCTAGCTGGATATAGCAGGCCGCTTCCGATGGTCGTTATCATCCCCTAGACAGCTAAATATTTAGATAAGTCACAACACAAAACCGAGAGGCACCTTTAACTTTCATTCTGCacggtgttttattttgtttttaattttcacGGAGTGGTAATTTTAGTTTTACTTATAAAACTAAGGCACGTTATTTTGTGTATAGAGAAATTTGCATCAGCTAGCTACAATACACATCAATCTATCTAAATAACTTAGGGCAAAGATACGTGCGACATTAAGGTACTGCTTAGCTTGTATGGGATTATTTAAGTTGGCACAGCTGTTGAAAGCCACACATGTAAACAAGTCGGACTGCGTTAATGTTTTGGTTCGTTATTTTATTGCAAGGTTTCACTACATGATGCTGAGCTGTTACCTGGACGGCAGTTTAGAGTGTTAAAGCTTGGATTTATCTGGCAATAATTAGCTTTACACAGACACTATAAGGCATGGGAGTTGTTGACCTGGAGCATAGCGAGACATATCAGCCATTCATTCATGATTAATGACCTTTGAGGAAGCAGACTGTCCTTTACCCATTTTCCAGTCTTtcttgtagttatttatttttaaccacTAATGCCacctagtaaaaaaaaaactgaggagATTTGAGTGTTAGTTTTTAGCAGCATCTGACATCCAACTGGAACTACTGGGGTGGATGGGAACATGAGGAGCACTCTGTCTGATCTGAACCAGCTTCCCAGTAGCTTGAAGATCTGATCAAAGCACAACAGAGAGCCCCATTGTGTGgactgaaaactgaaaaaggaAAGATGATGTGGATGATGATAAAAGAGGCCCAGTGACAGTGTTGATCCCCGCACCAGGAAGCAGAGGAGTGTCAAAAGGCTGCAGATATGAGTCTCCGCCAACCCACCTCTACACTGGACAGCAGGGCAGCCAATAAGAAAAACGTCCACCCGTTCAGCCCTTTTGCTGCTTGGCTCAGCAGTCTGACCATCGGCGACTCAGAGCGCAAATCCTCTGCCACCCAGCAGAGGGAGCCATCGATTGAAATCCCTGCTGAGATTACTGGTACTGGTCTTGTTCAGAGATGTGTGGTCGTGCAGAAGGACCAGCTCGGCTTCGGCTTCACAGTATGTGGAGAGAGAGTCAAGCTAGTGCAGAATGTCCGACCTGGTGGTGCAGCAGTCAAGGCCGGGGTCCAAGAAGGGGACCGAATCATAAAGgtgaatggctcactggtgtcctccatgTCCCATCAGGAGGTGGTAAAGCTCATCAAATCTGGACCATATGTAGCTCTGACACTACAAGGGCCACCCCCTTCAGCCGCCTCCTTGCCCTTAGAGCCCCTCCCCACTGAGCTCACATCCAATCAAAGAACGTCTCTGGGTGGGGAGGCCCCACCCCCTCCACCTCCGCCCCTGCCCTCTGGACTGAGCAGCACCCCTTCCCAAAGAATCACTGGACCCAAACCACTACAGgaCCCAGAAGTACAAAAACATGCCACTCAGATACTCAGGAAAATGCTGGAGCAGGAAGAGGCTGAActgcagGAGTTGATGGAGGAGCAGTTGAGGAGCCCGTCGCTGTCACTGGGGGAGCGGATTGAAAGTGCCAAGAGAAGAGCTCACCAAGTCAGGGTCAAGATTCAGCAAGATCTGGAGGGAACGCGATCCGAATGTCCCACAAGCTACGTCATAGCAGGAGAAGGTCGACTATCAATGGAGTCAAGCGAAGGAGACATGGAGGCCTTTGAGAGTCCCCACTCCTCCCCTTCATCCTCCTTCAGGATCCCCCAACACCGACGGCagaactccgacacacacaccctgtctgATTCGGGCGGAAAGGCCCAGATCATCGGCCCCGAggaagaggatgaagaagatGACGGCTATGCATTTAACGAGaTGGACGGACCGTTCCAGGACATTGAGTTGTTGAGGTCACGACCGGCACACATGGCGGTGTTCATGAGATACGTCTTCACCCAGCTTCTGGACCCCAACCCTCTGCTGTTTTACCTGTCGGTGGAGGCCTACCTGGGCTCCAGTACTAAAGACGCCCGCGCACTTGCACCTCAGATCTGTTCCCATTTCCTGGACCCAGATGCTCCCCTGAAAATCAAAGTACGAGAGGAGTATCTCACAGATATAGGTAAGAACTAATCATCACCGGAGGACATCAGAGGACCTCTGTCCGAGCTGCAGCAGCTAGTGCTGCCAGACATCCAAGACCAGATACAGGACTACAGGAACAAGCAGATGATGGGTCTTGGCTCTCTGTTTGGTGAAGGAGACCTGCAGCAGCTGGATGGAGACCCgatgaaagagagacaggtggTGGACAGACAGGTCACTGCCCTCTGGGAAATACTATCAAAGCACGAAGAGGACAGAAgTTCTCCTCTGGCTTCGGCCGTGCACCTATACCTGCGTCATTCTGGTATCAAGCTGAGAGACTCCAAGGTCTTCCCTGGTCTGAGCACGGAGAAGGAGAAGTGGCTGGCTTTCTTAAAGACGAAAAAACTGAGTGGTaccaagaaagagaaagatggagaggatAAAAAGAGAAATCCCATCCTGAAGTACATTGGCAAACCCAGGACCACATCCCAGTCcaCATTCCATGTCCCGTTGTCTCCCACCGAAGTCCGTCCTGGCAGTGTGAGGAACATCATTCAGCAGTTTGAGAACCACACAGAGAcgggagaggagggagacgaTGCTGCTGACCCCCAGAGGCTCTCCACCAGCAGCCTGGGAGAAGACGGCATGGACAGCCCTACGATCTCAGTGCGTCTGGCACGCAGCGAGTCGTTGAAGGCTCAGGGAGAAGGGCGGCGGCGGGGCGTTGTCTCAGGGACGGAGTCTGTCCCTCGCTCTCGTAGCGATGTGGACATGGAGGACTgcggggaggagagggagggaccAGGCCTCAGGCTGCTGCAGCACAGCGCCTCGTCCTCTGCGTCCAGCAGCTCTGCACGGTCTCTAGAGAACCCTACACCCCCATACACCCCTCGGTCTAGACGCAGGAGTGTGGATTCACCGTTGGCCCTGCTGCCAGACACTGCAGcactggaggaggaggtgtttGACAGTCAGATCTGGCAGGACACAGTTCCTCCTCAGCTCCTCGCCACACTCAGTCCAAGGGAGGTGGAAAGACAGGCCGTCATATACGAGCTGTTCACCACCGAGGCGTCCCACCTGCGGACCTTGAGGGTCCTGGACCAGGTCTTTTTCCAGAAGATGAGGTCTGTGCTGAACTCTGATGAGCTGGCCTGCATCTTCCCCAACCTGCCCCAGGTCTATGAACTCCACGCAAGTCTGTGCGAGGCGATGAAGAAGCGAAGAGAAACTCCCATCGTTCAGGACATCGGGGACGTTATGCTGGCCAGGTTTGAAGATGCAGCTGGAGATGAGTTTCAGGAACAAGCATCGCAGCTGTGCAGCCAGCAGTCTCAGGCTCTGGAGCTCATCAAGAACAAACAACGTAAAGACCCTCGCTTCGCTCACATCatccagGAGTGTGAAGCGAGTCCTCACTGTCGGAGGCTGCAGCTCAAAGACCTGCTGGTGTCAGAGATGCAGAGACTCACCAAGTACCCCCTGCTGCTGGACAACATCATTAAACACACAGAGGCTGTTTCGTCGGACCTCCCCTCACTTCAACGCGCCCAGGCTTGTTGCCGAGGGATACTCCAGGCTGTTAATGAGGTTGTCGGGGAAATAGAACACCGGCAACGCCTCAGTCAATACCAACGCAGGCTGGACGCTGCCCCTCTATTCAAGAGTCTGGACCTCACCACTAAGAGAATGATTCATGAAGGTCCTCTCACGTGGAAAGTCAGCAAAGATAAGCAGATAGAGATTCAAGCGCTGCTGCTGTCAGACTGCCTGGTCCTCCTACAGAGGGGCCCAGACGACCGGCTGCAGCTGAGATATCCATCCCGCTGGCTGGGTGGAGGCAGCGGAGACAGCAAGACCTCCTTCAGCCCTCTGGTGAAGCTGGACTCTCTGCTGGTCCGCTTAGTAGCTACAGACAACAAAGCCCTCTATGTCATCAGCACCACAGAGAGGCAGATCTATGAGCTGGTGGCTGGGACATCATCAGAGAAAAACACctGGAAAGATTTACTTGAAAAGACCATCTCGTCAACTGGTGGTTCATCGCCCCTGATCAATCACGGATCCATGCCTATATCCTCCCCCAGTCTACGCAGTGCGTCCCCAGCGTCAACTGGCAGCAATGTCTTTGCAGACAACTCCATGACGGAGCAGTCGGATTCAATGGAGACTCATTCCTCCGAGGACATTGAGCTCTCAGAAAACACACCTAGGGACCAATCAGGAGCTTTCATCTGTGGTGAGAGAAAAGACGGTGGTGTGGCAGAGGCCGCTTTACAAGATGTTGAAACACTAAGGCAGCTGATATTACGAGATTTGGAAGAGGACGGTTGGAGCCACGATTCAGATGACACGCCCACCAACGAGACGGCCAACGGAAGGAGCTCATTCACCGAAAGACAGCGGCCAGAGTCTCTCGAGACTGTCCTCAACTTCAGCATCAACGAATGGGAGGCCGAGCCTGAGGAGGTTCTGCCTCAAGACGCAGAGCAACCCAGCAGCGTTCAGGTCGTACGGAAAGCTGTGGTTGCGggtccttcttcttcttcttctgtccgTGATGACATCACTGATGGTGTCACCCTCCCCTCCGACCAATCATCCAAGCCGAGAGGCGAGGCCACTATGCAGGGGAACACTTTCTACTTGGTAATGCCGACGGAGCAGGGAGAGAGCTTCACTGAAGACCTCAACGACCCTCCTACCCCCACAGGCAGCCACTTCCCTCAGCCTCTGGAGGAAGTGATACCACCACAGACTCATCCAGAGGAGGAAACGCTCACCTGCGGTGCAGAGCCCAACCAATCAGAGGCTATGCAACTGGAACAGGAAGAGGAAACGGGCCAATCGCAGGCTGGGCAGAGCCACGTGATCAAAAATGTGGATGAGATTTTCCACACGATTGAGGGGTTGACGAGCAAGTTGCGCCAGCTGAAGGAAATCGAGAAGTCCCATCACAAGCTTTTGAAAACCCTCAGAGAGCCCTTCGTCAATCAGGACTCCGAGGACCAACAGTGTCACTCAGCAACCGTCTCCAGAACACCATCTCTGGATCGTAGCTCAGGAGACGGCAAAGAGGGCAGTCCAGCAGAGCCCAAGATTCTGTCGACTGGATTCTGACGTCGCTGCAGAGTGGATTTACTTGCGGTCAATCGATCTTAATTGTTGGCATACGGACAGACCCATGCATACCCACTGTCGGACTCCGGCGCCACAGCCCTGCCTCACCTCGCCCCCTCGTCCCTGCATGCACTGGCCAGTGGAACAGAGCCCAGGAAGGACTGTAGCTGTTTGCTTTCTTTAAGCTGGCCGGATTGACCAGGATTTCTGAGGTCCGCACAACCTCTGACTTCTTCCAGAGCACGGGGGAGTCCAGGACCGAGTGAGGAAAGAgtatgaaggaaaaaaaaaaaagttgactggttaaagagagaaaggaaaaaaaaaaaataaggttgGAAGAATTGAAAGTGGGGGAAAATGACCAAGTTGGATATATGTGAAGAAAAAGGAGTTGTATGTCTTGCTTTAAAGAGCTGGTTGAAGGAACGGAGCAGAAAAGTGTTGACatgtttatttaaggaaaaatcCGAGGGACCCACCGCCCCTGCACTTTACCCACAATGCATCCCTCTGTCATGTACGTCCTCTACAGTGGACGGATCAGGAAGCGGAGATGCCACTGGCTTTACATTTAGGGGCCGACGTTACAGTGCCCGGCTCCCCGCCACTAGTTGCTTTACACTGAGTTCACCTGCCACCACGGCCGAAGGACTGTGTCTATATAATTCAGGTTATTTGCACTGGGTAAGGAAaccaatatcacacacacacattaaaccgTTTCATTCATCTCAGACCTTCGTAATCTCCCCACTGTGGGGGAAACACTAGAGTTGTTGTCATCAGGAACAGTTGTAGCCACACTTACCTATCCGTAAGCCCTCCTTTTAAGTAAAGCTTGGAACCATCAGTGCAACTTATTGATGGTTTAATGGTTTGTGTTGATTGTTCACTTCAAAGTTCTGGAAACACTTCTGCGCTGTCTACTACTGAAATGCTGGCAGGTTTTATTTTCAGCGCTGCTTCAGATGGCGTACAGGGATCTCAGCGATTTAAATAAACAAGCTCAGTGGATTCGCACAGCTGTTCTGATCATGTAAAGTTGTTTTAAGTTTGGGAGAGTTCTGGTGTTTTGGGGCAAGGTTCAAGAAAGGCAATGTTGATGACGAGTGTGAGGAAAGAGGACAAACGACAGATTCAAACTTAGAAACTTGAATTTTCACTGGCGTCCTGTGTCGCTCAACCAAATTGCTGCCAAATATCGCCGCTGACATTGCCTGTCTACACTTTTAAGATTTGACTGTGTGTCCTCCACCCCTCTCTCcggtgtactgtgtgtgtaaatcCCACGGTAAATACTGTGAACCAGCAACTCCTCCCTTCCCCCATGCAGCGCTCGTACCATACATAGTGTTTATATCCGTCTAACCTACATCTTGTCCCCCTACCCTTCACAGAACaacttatatttattatatacgTGGTCCAATCAAAAATCAACAAGTAACCGCTATATGCAACTGTGCTGTGATCACAGCAGTTcgatgaagtaaaaaaaaaaaaaatgtaaagggatagtttgacattttggaaaatacattTACGGGCAAAGATCGATACCACTTTCATATATGTACGGTAAATCTGAAGCTAACGACAGAcgcagcttagcttagcataaacactGGAATCAGGGGAAATCGCTAGCCTGGCTCGCTCttaaggtaacaaaatccaccaacTAGCACCTAAAGAGCACAGTAATTAATATCTCATTGGTTCCTGCAGTCTCTGCGGGTTACTGCGCCTGAACGTATCGTTTTCACCATGTTGGTGTTTTACaccaagctaagctaaccagctgctggctccaGCTCCGTACTTGAAGCACAGACGCACGAATGGTATCGATCTCATCCAACCCGGGGCAAGGAAGCTAATAATGTCGAACTATTCCTTGAACTATTTTTGGATCATATGTAGGAGGAATTTAACGTCCTTGACATTCAGAAAGGTTTTTGTACTCCTTGGTTGAGGCACGTGTAACCAGCAAAGACTGACACTAGAGCAAAGTGCTTTTTTCTCAAACGCCATCTATCTTGAACTAATTCCAATAAACCCTACACCGAAAAGATGTATTTAAAATGTCACaaggaaggaacttcttttAGAGAAGTTATTTTGTCTACCAGtttaaatgttgttgttttttttgtctctttctttctcttatcAAGCTGGGCAGAATCACACTGGACTGGATTTTATTTGAGCTGGTTTCAAATACTGAGGAGCACTTTAGTGAGTTACCCAGCAAAACTGACAATACACTACCAAACTGCACAAACCAGGAGCCAAGTATATTTACAAACTACCAGCCAAATTCTGCTATGAAAATGATATTTCACTGCCTAGTGGAAGGTTTTCACTCTTTAGCCAGCACACACCGAAGGCGTCGTTTGATGAGAAGTGTAACTTGGCTGTCGCATatgatcaacaaaaaaaaagaaaaaagagtggACTTAGAATGAGAGCTTCTGATTGCATAGGCTGGCTGATTTTAGCAGCTGAGCCATTATGAATATGAGTAATTTGtgctaaaatgtaaaaatgttcttCCGAAGTGAAATATCTCTTTAGAGGTGTTGAAGGGAACAtggtttggctttttttttcttgacattTTGGCTGCTGATTTTCAAGCATCTTGGACCATATGTTTTGTCCATgaccagaaaagaaaaaaatattccttCATTTTAACACATTGCCGTGCCAAGCTATGGACACTCAATCATCACATGCATAacgtgtgtgttgtctgtaatTTGGCACAAAAAAATGCCAGATGGTCTGAGTTGGTTGAATCCAAGTCAGGATCTCTTCTTCTCCTCGACAAATATCTTTCCTCTTTTTCCCCTCCCACCTCTAACTACAGCATTAGTTCATCTCCAATTTCTACCTCTACACTTCAGTTTCTTTGTATCTTCCATGATTTCTTCTTTTCATACATTTATCTTGTACATTGGCATCAGCGTTGTGGCCCTAACCagctgtaaaaagaaaaagaaaaaaagaaagctatAACTGATTCCTTTTTTGTTAAAAGAAATGTTGCACAGACAAACTTCCCTGCACGGTGCAAACTACTGTATGCATACACACGTCTTACTATCATCtcattgtctttttattttgtgtctttttaaaaaCTCTTGTTCACTCATGTAATATAGAGAGATCAGACCCACTTGTTTTAtatatgttcatttttttttctgtaaagccTTAGTCCTcgtatttgattttatttttgtagatataattttttaaaaaggatgtataaattattTTCTTCTCCCTTGTTTTTAAAATTGGTGAGATTGTTTAGCTGCACAGAAGGAACAGAGAGCTCATGTCTCAGATTCATGTGTTTTGTGAGATTAAAAAGAAACTGGattaaagaaaagagaaaatgtgGA

Function

symbol description
arhgef11 Enables G-protein alpha-subunit binding activity. Acts upstream of or within several processes, including epithelial cilium movement involved in extracellular fluid movement; otolith development; and stress fiber assembly. Predicted to be located in cytoplasm and membrane. Is expressed in central nervous system; head; and pronephric duct. Orthologous to human ARHGEF11 (Rho guanine nucleotide exchange factor 11).

NR:

description
PREDICTED: rho guanine nucleotide exchange factor 11 isoform X1

GO: NA

KEGG:

id description
K12331 ARHGEF11; Rho guanine nucleotide exchange factor 11

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039822512.1 True 9236 mRNA 0.48 43 19679255 19702223

Neighbor

gene id symbol gene type direction distance location
LOC120573581 LOC103480354,LOC103144605,LOC104935705,LOC104965865 coding downstream 1633 19667699 ~ 19677622 (-)
LOC120572523 NA coding downstream 91178 19587130 ~ 19588077 (-)
LOC120572473 NA coding downstream 125414 19529160 ~ 19553841 (-)
LOC120572474 NA coding downstream 155265 19512028 ~ 19523990 (-)
pnp5a pnp,LOC103368940 coding downstream 272897 19403481 ~ 19406358 (-)
LOC120572266 NA coding upstream 178117 19880340 ~ 19894923 (-)
cbln11 NA coding upstream 362573 20064796 ~ 20070624 (-)
LOC120572528 NA coding upstream 378518 20080741 ~ 20085137 (-)
si:ch211-63p21.1 LOC103371025,LOC102193822,LOC102788031,LOC101475184,LOC100709095 coding upstream 385224 20087447 ~ 20093439 (-)
LOC120572322 NA coding upstream 465816 20168039 ~ 20173402 (-)
G144585 NA non-coding downstream 11758 19666458 ~ 19667497 (-)
LOC120572478 NA non-coding downstream 132832 19544171 ~ 19546423 (-)
G144476 NA non-coding downstream 443731 19234321 ~ 19235524 (-)
G144425 NA non-coding downstream 578418 19100428 ~ 19100837 (-)
G144424 NA non-coding downstream 579025 19099980 ~ 19100230 (-)
G144735 NA non-coding upstream 14761 19716984 ~ 19815341 (-)
LOC120573676 NA non-coding upstream 37135 19739358 ~ 19742781 (-)
LOC120573678 NA non-coding upstream 44282 19746505 ~ 19746825 (-)
LOC120573677 NA non-coding upstream 52997 19755220 ~ 19755722 (-)
G144776 LOC104967121 non-coding upstream 175451 19877674 ~ 19879627 (-)
si:cabz01074946.1 NA other downstream 13463 19657083 ~ 19665792 (-)
LOC120572670 NA other downstream 325949 19282933 ~ 19353306 (-)
prkd4 LOC103376196 other downstream 412902 19247950 ~ 19266353 (-)
clcn3 clcn3 other downstream 622473 18962866 ~ 19056782 (-)
G144258 NA other downstream 1082024 18595102 ~ 18597231 (-)
G144730 LOC100695354,LOC106632790,LOC105940461,LOC104965881,LOC101481059,LOC106632521,LOC103369240,LOC102791106 other upstream 74457 19776680 ~ 19797530 (-)
LOC120573300 slc12a6 other upstream 1125060 20827283 ~ 20863889 (-)
nop10 NA other upstream 1162534 20864757 ~ 20867106 (-)
LOC120573168 LOC103355779 other upstream 1204232 20906455 ~ 20929559 (-)
si:dkey-172j4.3 LOC102306481,LOC103363024,LOC100708735,LOC101468909,LOC102781820,LOC101073787,LOC108246481,LOC106609052 other upstream 1649019 21351242 ~ 21438456 (-)

Expression


Co-expression Network