zgc:153012


Basic Information

Item Value
gene id zgc:153012
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 37888160 ~ 37907366 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039822676.1
tctgtgtgtgtgtgtgtgtgtctgtgtgtctgtgtgtctgtgtgtgtgtgtctctgtgtctgtgtgtgtgtgtgtgtctgtgtgtctgtgtgtctgtgtgtgtgtgtatctgaggATGAGTGGAGGTAAAAAGAGGAGTGGCTTCCAGATCACCAGTGTGACGTcagacttcaaccaatcagctgcGAGCGTGTCTCAGGGCAGCTCCTCCCAGCCGACCACACCCTCTCCGAAGAGGAAGTTCGGCTCCCATGATGCAACGGGGCAGGGGTCCCGGTTCCGGGTGGTCCGGCTGGCCGTGGGCGCGGCCAGCGGGCGCGGCGAGACGACTCGGCGCGGCCGCTGGACCTGCACGGACTTCATGGAGCCGCAGGACGGCTTCAGGCGCGTCATGGACTCCATGAGACACGCCCACTCGCTGGAGTCCCTGGAGCTGATTGGCCGGGACGCAGACAGGGGCGGGGCCTACTCCCAGGAGCCAATCAGAGGCGGAGTCTACTCCCAGGATCCAATCAGAGGCAGGGTGGGGCATGTTCTGCAGAGTGGGCCGTCCTCTCCGACCCACCCGGGGCCAAACGTCCGTATCCTGGCAGCGCCGGGGTTAGACTCCGCCCCTCCCCCGCCATCGCCACGCCCACGAAACGTCCCTCCGCCTCTACGGCTGGACGTGGACTCTGCAGGACGGtCTGTCCTCAGGCTGTCTCACTCTCAGCCCAGCTCCCCCCCTGCCGGGCCGTACCATCCCACTCTGACCCCCAGTCACACTCCAGCTGCCTTCAGTCTGGACCAGACCTTCTTCAACCTGCCAGGGGACGACAGTAGTTCCAGTAACAGCCTGATTGCCATCGACAACAAAATTGAACAGGCCATGGACCTGGTGAAGAGTCACCTGATGCTGGCGGTCCGAGAGGAGGTGGAGCTTCTCAGGGAACAAATCAGAGATCTGCAGgAGAAGAACCAGCAGCTGCAGAGAGAAAACCACATCCTGAGAACtctaacacacaacacacaatctacacaacacatgacacacacaatctacacaacacacacaacacatgacACACAATCTACACAAGCTGCacaacacatgacacacacaatctacacaacacacacaatctacacaacacacataacacacaatcTACACAGGAGAAGAACCAGCAGCTGCAGAGAGAAAACCACATCCTGAGAAAtcctacacacaacacacacaatctacACAAGCTGCacaacacatgacacacacaagctacacaATCTACacaacacatgacacacacaagctacacaacacaacacacacaagctacacaaca
>XM_039822677.1
gtctgtgtgtgtgtgtgtgtgtctgtgtgtctgtgtgtctgtgtgtgtgtgtctctgtgtctgtgtgtgtgtgtgtgtctgtgtgtctgtgtgtctgtgtgtgtgtgtatctgaggATGAGTGGAGGTAAAAAGAGGAGTGGCTTCCAGATCACCAGTGTGACGTcagacttcaaccaatcagctgcGAGCGTGTCTCAGGGCAGCTCCTCCCAGCCGACCACACCCTCTCCGAAGAGGAAGTTCGGCTCCCATGATGCAACGGGGCAGGGGTCCCGGTTCCGGGTGGTCCGGCTGGCCGTGGGCGCGGCCAGCGGGCGCGGCGAGACGACTCGGCGCGGCCGCTGGACCTGCACGGACTTCATGGAGCCGCAGGACGGCTTCAGGCGCGTCATGGACTCCATGAGACACGCCCACTCGCTGGAGTCCCTGGAGCTGATTGGCCGGGACGCAGACAGGGGCGGGGCCTACTCCCAGGAGCCAATCAGAGGCGGAGTCTACTCCCAGGATCCAATCAGAGGCAGGGTGGGGCATGTTCTGCAGAGTGGGCCGTCCTCTCCGACCCACCCGGGGCCAAACGTCCGTATCCTGGCAGCGCCGGGGTTAGACTCCGCCCCTCCCCCGCCATCGCCACGCCCACGAAACGTCCCTCCGCCTCTACGGCTGGACGTGGACTCTGCAGGACGGtCTGTCCTCAGGCTGTCTCACTCTCAGCCCAGCTCCCCCCCTGCCGGGCCGTACCATCCCACTCTGACCCCCAGTCACACTCCAGCTGCCTTCAGTCTGGACCAGACCTTCTTCAACCTGCCAGGGGACGACAGTTCCAGTAACAGCCTGATTGCCATCGACAACAAAATTGAACAGGCCATGGACCTGGTGAAGAGTCACCTGATGCTGGCGGTCCGAGAGGAGGTGGAGCTTCTCAGGGAACAAATCAGAGATCTGCAGgAGAAGAACCAGCAGCTGCAGAGAGAAAACCACATCCTGAGAACtctaacacacaacacacaatctacacaacacatgacacacacaatctacacaacacacacaacacatgacACACAATCTACACAAGCTGCacaacacatgacacacacaatctacacaacacacacaatctacacaacacacataacacacaatcTACACAGGAGAAGAACCAGCAGCTGCAGAGAGAAAACCACATCCTGAGAAAtcctacacacaacacacacaatctacACAAGCTGCacaacacatgacacacacaagctacacaATCTACacaacacatgacacacacaagctacacaacacaacacacacaagctacacaaca
>XM_039822678.1
ctgtgtgtgtgtgtgtgtgtctgtgtgtctgtgtgtctgtgtgtgtgtgtctctgtgtctgtgtgtgtgtgtgtgtctgtgtgtctgtgtgtctgtgtgtgtgtgtatctgaggATGAGTGGAGGTAAAAAGAGGAGTGGCTTCCAGATCACCAGTGTGACGTcagacttcaaccaatcagctgcGAGCGTGTCTCAGGGCAGCTCCTCCCAGCCGACCACACCCTCTCCGAAGAGGAAGTTCGGCTCCCATGATGCAACGGGGCAGGGGTCCCGGTTCCGGGTGGTCCGGCTGGCCGTGGGCGCGGCCAGCGGGCGCGGCGAGACGACTCGGCGCGGCCGCTGGACCTGCACGGACTTCATGGAGCCGCAGGACGGCTTCAGGCGCGTCATGGACTCCATGAGACACGCCCACTCGCTGGAGTCCCTGGAGCTGATTGGCCGGGACGCAGACAGGGGCGGGGCCTACTCCCAGGAGCCAATCAGAGGCGGAGTCTACTCCCAGGATCCAATCAGAGGCAGGGTGGGGCATGTTCTGCAGAGTGGGCCGTCCTCTCCGACCCACCCGGGGCCAAACGTCCGTATCCTGGCAGCGCCGGGGTTAGACTCCGCCCCTCCCCCGCCATCGCCACGCCCACGAAACGTCCCTCCGCCTCTACGGCTGGACGTGGACTCTGCAGGACGGtCTGTCCTCAGGCTGTCTCACTCTCAGCCCAGCTCCCCCCCTGCCGGGCCGTACCATCCCACTCTGACCCCCAGTCACACTCCAGCTGCCTTCAGTCTGGACCAGACCTTCTTCAACCTGCCAGGGGACGACAGTAGTTCCAGTAACAGCCTGATTGCCATCGACAACAAAATTGAACAGGCCATGGACCTGGTGAAGAGTCACCTGATGCTGGCGGTCCGAGAGGAGGTGGAGCTTCTCAGGGAACAAATCAGAGATCTGCAGGAGAAGAACCAACAGCTGCAGAGAGAAAACCACATCCTGAGAACtctaacacacaacacacacaatctacACAAGCTGCACAACACATGACACGCACaagctacacaacacacacaacacccacaatctacacaa

Function

NR:

description
PREDICTED: TSC22 domain family protein 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039822676.1 True 1322 mRNA 0.57 6 37888161 37907366
XM_039822677.1 False 1320 mRNA 0.57 6 37888160 37907366
XM_039822678.1 False 1083 mRNA 0.60 5 37888162 37906970

Neighbor

gene id symbol gene type direction distance location
mogat3a LOC103373940,LOC102228168,LOC101069338,LOC102789680 coding upstream 4824 37862170 ~ 37883336 (+)
LOC120573434 NA coding upstream 49124 37837985 ~ 37839036 (+)
eno3 eno3,LOC107373383,LOC102226549,LOC107102308 coding upstream 255573 37613778 ~ 37632587 (+)
LOC120573353 NA coding upstream 286088 37594216 ~ 37602072 (+)
LOC120573344 NA coding upstream 330014 37533275 ~ 37558146 (+)
LOC120573166 LOC101474114,LOC102200943,LOC100707861,LOC108248584 coding downstream 3853 37911219 ~ 37952036 (+)
eif4e2rs1 LOC101069572,LOC100709750,LOC105891435 coding downstream 128449 38035815 ~ 38063462 (+)
LOC120573389 LOC108250633 coding downstream 157335 38064701 ~ 38106195 (+)
LOC120573398 NA coding downstream 322496 38229862 ~ 38252888 (+)
LOC120573404 NA coding downstream 517511 38424877 ~ 38428658 (+)
LOC120573164 NA non-coding upstream 621 37885677 ~ 37887539 (+)
G149870 NA non-coding upstream 24459 37863184 ~ 37863701 (+)
G149857 NA non-coding upstream 143945 37743793 ~ 37744215 (+)
G149856 NA non-coding upstream 148876 37738489 ~ 37739284 (+)
G149852 NA non-coding upstream 154178 37733772 ~ 37733982 (+)
G149878 NA non-coding downstream 52554 37959920 ~ 38028577 (+)
G149884 NA non-coding downstream 67974 37975340 ~ 38008410 (+)
G149899 NA non-coding downstream 234498 38141864 ~ 38143226 (+)
G149902 NA non-coding downstream 244856 38152222 ~ 38155353 (+)
G149881 NA non-coding downstream 263905 38171271 ~ 38292545 (+)
G149853 NA other upstream 36279 37743174 ~ 37851881 (+)
G149843 LOC107105148 other upstream 207051 37676995 ~ 37681109 (+)
G149671 slc25a11 other upstream 317452 37567913 ~ 37570708 (+)
G149657 NA other upstream 536316 37351075 ~ 37351844 (+)
G149584 NA other upstream 950018 36937406 ~ 36938142 (+)
G149880 NA other downstream 262110 38169476 ~ 38457596 (+)
LOC120573406 NA other downstream 357071 38264437 ~ 38358857 (+)
G150060 NA other downstream 555776 38463142 ~ 38521503 (+)
G150081 NA other downstream 774965 38682331 ~ 38728091 (+)
G150139 NA other downstream 973205 38880571 ~ 38883270 (+)

Expression


Co-expression Network