LOC120573249


Basic Information

Item Value
gene id LOC120573249
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 18902966 ~ 18912675 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039822852.1
TTCAGATGAGATTGTTCACATAAGAGCCATGGTGGTGTACTAAGAAGTGCCATACTTATTAAAGGTTTTTACGTTGAGAACTGTAGGTAAAATGGATGAATACCAACATCCGTTGTTCTTTGAAGCAAAAGATCTGACTGACAGAGACGAGGAGAAAATCAGGaggcactttcaaaaaagaCGGGATTCTGGGGGAGGGGATTGTGGAAGGATTGAAAAGGCTGGAGGCAACACCTATAAAATCTGTTTCAAGGAAAAAGAAGaccaGGAAAGGGTTTTGCAGAGGAAGTTTCACAGTATCTCCCTTCCTTGTGGAGAACTACGTCTGACTGTGAGCCGAACTAATTCACCACTTGATCAGCCATCCACTAGTCAATCACAGACATTCACAAAAGCAAACACAAAAGGCCTTGAGAAGATTTTCCAGCTGGATATCTTCCTCCTGTATTTCCTGAGAGACAACCTTAAAGCACATAAAGTCTTACAGAAGCAACTCTCTTCTATCGGCTGCACAGTGGAGTTGGATTTTGATAAGGAGGAGGCAGTGGTTCGGGGGGATATTGAGAAGGGGCCTGGAGGAGCCTTTGGTGCTGCAGAGAAATGGGAGATACAGGTGGACAGGGTCTTCATCGGTCTTACGGAGACCTACCTTTGCTATCATATGGTTGAgccaaaacaaatcaaaatccTACTGCAGAACCCTTCCTTGGTGACCGACGATATCAAAGTGTACCAAGAGAGTGGCTATGCTGTGGTTGTGGGAGAAGTTGAGGCTGTAAAAGAGAGGATTGCAATCCTGGAGAAGAGCCTGCCAACCCGGAAGGAATTACCAATTGTGAAGAAGAAATTCAAACTGGTAGAAGAAGAGTTTAGTAGAGAAATGCGTACACATTACCCAGATGTTAAAATCGTATTAGGCAGCGGTGTGATCATCTTGGAGGGCCCTGACAAGGAGGTGCAGTCAGGAGCTACGAAACTTGATGAACTAATCAAAAATGTAAAGGAAAAGAGAGTTAAGCTCTGCCCAGCTTTAATGACCTTTATAACATCCAGCGGTGCCATCTCAAAATACCAGGCTCGCTTCCAGCAGAGCCTCAGAAATCCTGTTTCCCTAGAGGTGGTGTCAGATCTAGTCCTGTCCAGTTTGTCCTCTGATGCCCTGGATGAGGCTGAGGCAGCAGTGCAGAGAGATCTTACTGTGGCCAATGTGCCGTTGCAGGGAGCTGCAGCTGTACCTCCAGATCTAGACAGAGTGAAGGAAATCCTAATTAAAGCCAAGAACAAGGCAAACTCTCAAGAGCTCAGAGTGGATGTCAGCTTCATCCCAGGAACCGCAACCATCAAGGTACAACTCGTGGGCTACAGTGAAAATGTGAACAAGCTCAAAGAGGTTCTGCATGACTACCAGATGAACCAAGTCGGGACACAAGAAGTGCTGAACCTACCGCATCCTGAACTGCTTGACTGTTTTGATAAAATCTTAGGACTGATTGGCATGAAGCAAACCAAGGTGACCTTAAAAGCCTCACATTGGCCATAcccttgtgtgcttgtgtctggTCCCCGTTGTCTGGTCCAGGAGACCCAGCAGGCTCTAATCTCAGCACTAGCCAGTCTGACAACAGACACTCTGGTTCTAGATGGACCGGGGGCTCAGCGGTACTTCCAAGCAGAGGGTAAAGTAGGCAAGGAGCTGGTCGAGACCTCCTGTCAGGTTATTGTCAGGGAACAGCAAGGTGTGCACTCCTCAAATGCAAAAATTAAACCACGAAGCATCACCTGCCCCAGCACCAGCAGCTTCACAGTCCAACCCATGCCCAGATTGCGCAGCAGCACTGCTGGAAGTATTGTGGTCAACAAGACAAGTCTGAAGATCAGCCTTGGCAGTTTGGTGGATGAGCAGGTGCATGTGTTGGTGGTTCCCATGCTCAACAGACAGCTAACTTCTACTAATATTGGTAAATGCCTGTTGAATAAAGCCGGGAACGCAATCAAGTCAAAGTTTGAGTTTATGGCAGCGAATTGTACCCTCGTCCCTGGTGATGTTCTGCAGGTTGATGCGCCTCCATCTCTGGGCTGCTCCAAGCTCTTCTTCATTGAGTGCTTGCCATGGGATGGAGTCAGAGGGCAGAGTGTGCAGgTGCTTGGTAATGGGCTGAAAAAGTGTTTGGACCTCTGTGTACAGCTGGGCTTGTGCTCAGTGGCCTTTCCAGTTATCGGACctggatttgttttaaaataccCACTGAGAGAAGCCATTCAAGTGCTGACTGAGAACATTCGCCAGTTTGGATTATCTGCATGCTCTGGGTCTCTCTCCACCATCCACATCGTCATTAAACCAGACTATCCTGACTCTGAGGAGTGCTACCATGATGTCAACAGACACCTCAGCTCAAATATGAACCAAGGAGGCCAAGCAATCTTCAGGTCCCTCACTAGTGATCTTGATGACATCACAATGACAGTGGGAAGCGGGGTTAAACTACAGCTGGTGTTTGGGGACATCACTAATGAGGTTACAGATGCTGTTGTGAACTCGACCGACTATGTTAACTTTCAAAACGATGGTGTGTGCAAAGACATCTTAACTCTAGCTGGACCAGAGGTGGAGGCTGAACTCAGAGCAGCAAAAGCGAATCGAGGAGACATTTTTGTGTCCCAGGCTGGACTGTTCACCTGTGAAGCCATTTTCCATGTCTGTGGGGAAAAGGATGCTGTCATCATCCAACAACTGGTGTGTCGCATTGTTGAATATTGTGAATCGTACGAGTTGAAGTCTGTCGCCATTCCTGCCATTTGTGCTGGAGCTGGTGGGTTGGACCCTGGTATTGTGGCAAGTGCCATCCTCCAAGGGATCAAGGCAGCCACGTCGTCCACTCCTCTTTACTGTCTCACTGACATCCGCCTCGTCCTGATTAAGATCAATGTCTTCTTGGCTTTTAAAGATGAAGCAATGCAAATGTTTTCCACTGCTGTAATCAACAAAGTGCCAGTACCTCAGTTGCCTCATGTAgtactacaacaacaacaacagccccCTTCGTCTGTGAGCGCAGACCTAAGCATCCTCCCTATTAGCTCTGCAAGTCAGCAGTCCGTGTTCCTGTTCTTGGGTCTCTCCAGAAAGGATGTTGACGATGCCATGACAAAGCTGAAGGATCTGTATCAGGCTCAATGCTCCACTCAAACCTTCAAAAAGGAAGAGCTGGAAGGCCTCACCCAGGACGACATGCAGATTCTGATGCAGCTGGTGGAGACTCAGGGTCTGTACGTGCAGAAGGACCAGTCTGGCCAGGGCACCTTAACAGTGAGTGGGTTAAAAGATGGGGTCAACCAGGTGATGCAACGGATTAACACCTGTCTGCACGGTTCCCTCAGAAGAGAGGTGAGAGTCAGAGAGGAGGATGATCTGTACAACCGTGTGTCTTGGTGCATCCTGGGACATAGTGGCAACTGGGAGAGACTACCCAAAACAGCAAATCACAACCTGGAGAATAATGATGTAGCAGGAGGGATAGTGGATGCACAAAACATCCAGTGGAGTGTAAATCTGCAGAGGATGGAGGCCACGGGACCATTACTTGGGCACACGGCGAAGCTGAAACGACTTGAGAATCTTTCAGACTTCACTCTTCCTCTGTACTGGGACAACATGGCTGCCGGTGAAACTTTGAAGGTGGTTGCACTGCAGCAGGCGTCTGCAGAATACCGGACAGTGAAGGAGGCCTTCAAACGAACTGTCCCCAAGACTGTTTTGAAGATCGAGCGCGTGCAGAATGTCCATCTGCGACGCGCCTATGAAGGGCAGAAGAAGCACCTTTCTGATAAAAACAATCAGCCGGGAGGAGCAGGTGAAAAGCTTCTGTATCACGGGACGACCCACGACAACTCCAACTCTATCATGAAAAACGGGTTCAACAGGCGCTTTTCTGGGCAGAATGCAACTGCATACGGTCACGGAACCTACTTTGCGGTAAACGCCAACTACTCAGCCCAACCCATGTACTCCAAGCCAGCTGCTGATGGTTCCGCGTTAATGTTCGTGGCCCTCGTCCTGACAGGAATCTACACTCTGGGCCAAAGCAACATGAGGGTCCCTCCTCCTCGCAGTGACCAGCAGCCTCATGACCGCTTCGACAGTGTGGTGGACAAAATAGACAACCCCAACATGTATGTTGTGTTCCATGATAACCAAGCGTACCCAGACTATCTTATCACCTTTAAATGACTATGAGGGAGAAATTATGAATTTTCCACAGTGCGAGTTTGTAAGTCTAGAAATATACAGAAAGTCTTCAGAATAAAGTAAAAGATAAGCTTTAGATTAGTTATATTTTTGGGTATGTTTACTTAAAGTTATGGTTGCAGTTATGTAATAGTATGTTTGAGAGTAGGCTAAGTAAAATGAAATTTGaacataaatatacatgtaAATCTTTAGTAGTTGATGTTGAAGTGAAAGTTCTCAGAATTGTTCcccagtatacagtatgtcaaactTAACTTTAACTGCCTGGGTGGGCACAAGGCTGGTTCTCCAGGAATGAGGATGTTTTGCTGTTGCACTTTAGTTTTTTTAGATGACAAGATGTACTGTTTACAGCTTTTGAAATCATAGCTAAAATGCCAATCATCTAAGCATTAATAAAATGTGTCAAATCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039822852.1 True 4665 mRNA 0.47 14 18902966 18912675

Neighbor

gene id symbol gene type direction distance location
si:dkey-185m8.2 LOC104955459 coding downstream 16913 18878121 ~ 18886053 (-)
ankrd53 NA coding downstream 57446 18842076 ~ 18845520 (-)
trnag-gcc_1 NA coding downstream 165814 18737082 ~ 18737152 (-)
trnak-cuu_5 NA coding downstream 203109 18699785 ~ 18699857 (-)
trnak-cuu_4 NA coding downstream 203469 18699425 ~ 18699497 (-)
trmt10b trmt10b coding upstream 25443 18938118 ~ 18945452 (-)
trnad-guc_5 NA coding upstream 52691 18965366 ~ 18965437 (-)
trnad-guc_6 NA coding upstream 54267 18966942 ~ 18967013 (-)
trnad-guc_7 NA coding upstream 58717 18971392 ~ 18971463 (-)
ino80b ino80b coding upstream 71957 18984632 ~ 18991780 (-)
G144303 LOC103360597 non-coding downstream 72651 18828464 ~ 18830315 (-)
G144275 NA non-coding downstream 202411 18700209 ~ 18700555 (-)
LOC120573605 NA non-coding downstream 652909 18248443 ~ 18250057 (-)
G144037 NA non-coding downstream 883660 18016249 ~ 18019306 (-)
LOC120572704 NA non-coding downstream 900495 17992145 ~ 18002471 (-)
G144346 NA non-coding upstream 23300 18935975 ~ 18936227 (-)
LOC120572676 NA non-coding upstream 80794 18993469 ~ 19002231 (-)
G144422 NA non-coding upstream 185907 19098582 ~ 19098840 (-)
G144423 NA non-coding upstream 186219 19098894 ~ 19099197 (-)
G144424 NA non-coding upstream 187305 19099980 ~ 19100230 (-)
G144258 NA other downstream 305735 18595102 ~ 18597231 (-)
c14h4orf48 cunh4orf48,lg24h4orf48,lg3h4orf48,c18h4orf48,LOC102785068 other downstream 363343 18536143 ~ 18539623 (-)
mrpl52 mrpl52,LOC102784052 other downstream 729939 18169214 ~ 18173027 (-)
G144058 NA other downstream 779276 18113852 ~ 18123690 (-)
LOC120573700 LOC100692994,LOC102197104,LOC102799729,LOC101170466 other downstream 822162 17973899 ~ 18080804 (-)
clcn3 clcn3 other upstream 50191 18962866 ~ 19056782 (-)
prkd4 LOC103376196 other upstream 335275 19247950 ~ 19266353 (-)
LOC120572670 NA other upstream 370258 19282933 ~ 19353306 (-)
si:cabz01074946.1 NA other upstream 744408 19657083 ~ 19665792 (-)
G144730 LOC100695354,LOC106632790,LOC105940461,LOC104965881,LOC101481059,LOC106632521,LOC103369240,LOC102791106 other upstream 864005 19776680 ~ 19797530 (-)

Expression


Co-expression Network