LOC120573289


Basic Information

Item Value
gene id LOC120573289
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 1492274 ~ 1500316 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039822938.1
GGTCACGGGCATTCAATGTTGGTTTACAGCCTTGTCTCTTACATGTAGAGATTTCTCCTGATTCTCTGGATCTTTTGATATTATGGACTGTACACTCTTAGAAGAGATGTGTTAAAAAATGACACACAAAAATGtgttgttacacatttaacacattGTGTGTGgatttctacataagagtgtaAAACATGTGTAAATAATGTGTAAAAAGGCTTAACACAGTTGATGTGTTGGACAGTGAATCTGAATTCTGCCCAGCAACAGCGTCATCCTTTTTTCGCGGTCTTCCATATTCGCGCCACAGTGAGTCGCTAAAGAAAACTGCCACAGTCCCGTCCAAGGAGAAGGGTTAGGATGGAGACTCCAAACTCCACGGAAGGGAGACATGGGCCGCAGGAATCTGTGAAAGTTCTTGCAACTACTTTTAAGAATGGAaatgaattgaaaagaaaaatttaCAGTGTCCAAAGCACAACAGAGCTTCTGGAAAAAACAAGTGAATTGGGATTCGTCCTTGACCGGATTTTAAAATTTAACACAGATTTCCAAGAGTTTACTGATGTTGACAGTAGTGTGCAGATAAGTAACCTTGACAGATTCCAAGTGCACTTTTCAGAAGCATCCCATCTTCAAACTGTCCCAAGAGAAGTCTGTCAAACGCAGCCTACACAGGAGCCGGATCAGCAGGCTGGTCTGAGGCCTCTGCTTGAAATGAAAGTTCCAGAAATATTTGATGAACTCCAAACTAAGGCCATTGTTACAGAGAAGACCCGAATGAAACTCATTAAAGTTTGCATCTCTGACTTAGTGGAGAAGCATGGATTTTATCCGTCCACTATTGAAAAGGTGGTTCTTGCAAAGAACATCATCACCATCTTCCCATCGCTTAAAGTCCAAATTGATGGCAGAGGAGAAGGCTTTGAGCATTTCTTCGATCCAGCATCACACTCTGGGTTTTTGGAGATGAGACTTCGCAATATCCGCCGGAAGCTAGAAGAAGGCCAGCGGCGTTACAGTAGACACAAGAGGTGCCGAGATGTTGAAGAGATGTCAAGTTCTGTGCAGGATGAAGGGGACGGCAGCGAAGTCAGAGAGTTCATCAACCTGATGAAAAGGCTGAGGCCTTCTGCAGAAAACATGTCCTCAATCAAATCAGCGATGCAGAAAACATTCACCTGGCGCAGATCGTGGATATCCAAACATTCACCCACCATGGAGGAAATCTTGCAAGAGTATCCACGCTTCTTGGATATACCAACACTGCTTGATACAGAGTTTGGTAAAATGCATCAAGGAAAGGGGGACCTGTTCCTAAGGCGGTGGGAGGCCAGCATCATGCCGAAGCTGAAAGCTGTTGCCGCCAGGGAGAAGGGTGATGTTGCATCTCTTGTTGAAGGGATGGAAGACCAAACTGATGATGAGAAGTGCTACATTATGTTGGTCGTCCTTACTCATCTCCTTCCACCAGTTGCAGCAAGCCGCTGTAGCATCAAGTCTGCGATTACACAACTCATTGATTTTGTGCCGGCAGGAAGTACCATTGCCTCCCTCTACAATGCATCCCAGGATCCAGCACAGAGCACACAGCCACAACTAGTCTGCATTGGTCATCTAAGGGGAGGGTCACAGCAGTATGTCATTGTGGGCAAGTCTGACAAGATTGCTATCCCCTTGGATGAAGGCCTGGCATGTGCTGTGGACAAGCTCTTCAAGCTCTACTGGGTATGCAACCTGGCCTACCCAGCCCCGCTCAGCTCTGTGTTCTCATTCGTCGAGTACATTTACGACTTACCCATGTCAACAAACAGGAGAGCAAAGGTATTGGAGCTCATTTCAAAAGTCAAGTCTATTAATTAGATCCCACCAAAATGTACAGTTGTCCAAAATGTCCGTCAAGATTCACACTGATAAAGAAACTGATTTGGCACCTTCGTGAAATACATGCATTGTCAGAGGGATTGGAGTTCACACTTACTTGCAGCCAAGATGGTTGTCCAAGGACATACCACAGCATTAATTCATTTACCAAGCACCTTTCTAGAGAGCACCAAATAGCAAGTACCACAGTTGTTGAACCTTCTCTTCAGACCTTCCCAACATTTACTGACTTCCCAGGGACCATCGACACTACACCTCTAGAGGAAAACCTAGCTGAGCCTTCTGAGGGGTTTAAACTTCTTTCTTCAAGTGACAGTGCAGCCTCATTTGTGGCAAAAATGTATGCTGGATCAAATGTAACATTAATGGATGTAACAAGAACTGTAACTTGTGTTAAAGAACTTGTGGAAACAACTGTAGCTACATTACAAAATTCGGTTTCATCAGTGTTCAATAATCTGGAGGTACCACATGACCATGAACTTGTGCAACCATTAATGGAACAGTTTGAAAGTGCCAAACACATGTTTGATGACATAGACActccttttaaaatgaatacacaTTTTTCAGAAAAATTTCATCTTGTCAAGCCAAAGGAACTTTTCCTTGGTCACAGGGCAGATACTGTACGGAAACAGGGACAAATGAAGCAGGTTTTGGCACCAGACACTTGTCAGTATGTACCAATACTTGAAACAATCAAATTTCTATTTAGTAAtgaaaaaatgcaaaatgtctacttaaaaaacaagaaaaggaATGACAACATGATGCGAGACTATAGTGATGGGTGTCAATTCTCTACTCATCCACTATTCCAACTGTATCCAGAATCCCTGCAAATTCAGTTGTATTATGATGATGTTGAGACA

Function

GO: NA

KEGG:

id description
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039822938.1 True 2753 mRNA 0.43 8 1492274 1500316

Neighbor

gene id symbol gene type direction distance location
sorcs2 sorcs2 coding downstream 62557 1018258 ~ 1429717 (-)
LOC120573525 mrps28 coding downstream 578594 906545 ~ 913680 (-)
LOC120573590 NA coding downstream 885556 600634 ~ 606718 (-)
LOC120573587 NA coding downstream 1354037 135443 ~ 138237 (-)
slc1a1 slc1a1 coding upstream 50212 1550528 ~ 1574124 (-)
LOC120573508 LOC103361692 coding upstream 159821 1660137 ~ 1664945 (-)
aco1 aco1 coding upstream 249203 1749519 ~ 1774918 (-)
LOC120573473 NA coding upstream 383586 1883902 ~ 1885687 (-)
LOC120572242 NA coding upstream 519296 2019612 ~ 2022367 (-)
G140437 NA non-coding downstream 9569 1481738 ~ 1482705 (-)
G140418 grpel1,LOC102799061 non-coding downstream 13461 1468232 ~ 1478813 (-)
G140413 NA non-coding downstream 29409 1461638 ~ 1462865 (-)
G140404 NA non-coding downstream 172699 1290908 ~ 1319575 (-)
G140401 NA non-coding downstream 337332 1154243 ~ 1154942 (-)
G140451 NA non-coding upstream 19505 1519821 ~ 1521839 (-)
G140454 NA non-coding upstream 29919 1530235 ~ 1530950 (-)
G140492 NA non-coding upstream 162705 1663021 ~ 1663252 (-)
G140514 LOC106908230,LOC105925506,LOC101079287,LOC100690429 non-coding upstream 219609 1719925 ~ 1725333 (-)
LOC120573239 NA non-coding upstream 275521 1775837 ~ 1782596 (-)
tada2b tada2b other downstream 3848 1482789 ~ 1488426 (-)
G140274 NA other downstream 1040604 443550 ~ 451670 (-)
tspan5a LOC100711712,LOC102299272,LOC102195201,LOC105938388,LOC103480072 other upstream 122943 1623259 ~ 1649432 (-)
LOC120573528 NA other upstream 426816 1927132 ~ 2032506 (-)
G140615 NA other upstream 551165 2051481 ~ 2058191 (-)
camk2d1 LOC100695450,LOC101472930 other upstream 953750 2454066 ~ 2573483 (-)
arsj arsj other upstream 1097518 2597834 ~ 2622100 (-)

Expression


Co-expression Network