ccdc96


Basic Information

Item Value
gene id ccdc96
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 1488484 ~ 1505654 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039822939.1
TTCCCCACATCCTGCTTGGTTAATATTAATGAGAAGAGGTCGGGGCGCCTCTGATTGGCTCCCGATCCCAGTTTCCAGGACAACCGAAACAAAACGAACAGTTTCAGACTACCGAAGGGCACGAGCCCTTTAGTTCTAGACACATATTGgggtgttctttttttttttccccattgaaAATGGATGGAGAGACAGGAAACGAGGTGAAGAATGTTAGGGTGGCGTCAGCAGCAGACTCTACCAGCGAGGAGGACAATTGTGCTGTGACAGGTCATGGAAGTGAAAAGGAAGATGTCAAAGCTGAAACGGTTGCATCAGATCATGATGAAGAAGACTCTGAAAGTGTGAACAACCCCACTAAAGAGGCCGCTGttgaagaagcagcagcagccacctCTGAGCCAGAGGAGAACACAAGCGAAGACTTGGATGTGAAGACAAATGAAGTCAGTGAACAGCCAAATGAAGTCAGTGAACAGCCAAATGAAGTCAGTGAACAGCCAACGTCCCACGAGGAGAGTGCAGCTGTTTCCCAGGTTAACAGCAGCGATGGCGATGGGCCCCCCAGTCTGCATCCTGAGACCCCGCAGAGAAAGAAGAACACTAGTCCTACACAGGCCGAAGAAGAGGGATCCACCGCTGCTCCTGCAGACAAAGAAGACAGCAACTATGAAGACATCCATCAGCCCAGGCAGGAGCAGCGTGAGGACAGAGACGTCCCCAGGCCCAGCCAACGCCACAGGCTGCTGCAGATGAAGCTGGCAGAGTTCTTTCAGAAGAAGGCCGGGGACGAGCCCCAGCTGGACAGGGAGGTCCCCGTGTCCGAGCAGGAGTATGAGAAGTACGTTGACCTGCTGGCTGAGCTGAAGCAGCAGCTCGCCGCCGATTCAGAGAGCGCTCAGAGgcaggcagaggagctgaggTTCAAGTCCCAACAGAGGCTGGACAAGGTGGAAAATGAATGGCGAGCGTTGGTGGCACTGAAGCAGGACGTAGCTGTGACGGTACTAAGCCGGCGCCTGGGTAAACAGGCTTCTCAGGCCAAAGTTGAGGCAACCCTGGCAACAGAGAAGCTTCTGCAGCACGAGCTGATCATGCTGCGCCGTAAGCACATCAAGCTGCAGATCAAGATTCGCCGGCTGGAGGCACAGCTCCGTGAAGGGGACCAACGTGCCAGGGACCCGTTACAGCTCCAGTTTGAGCAGCTGCAGGCTGAGAGGCTGGAGCTGAAGAAACACACCAAAAAGCAAAATGAGGAATCTTCAAAGATGCATAAAAAGATCAGCAGCAGCTTGGAGCTCCTGTCAAACGTCAAGGAGAAGCTGTTCTGGAGCCAGATGGAGGTCCAGGCCAAGAGAGAGCAGCTGGCCGTGGTGGAGGCCACGGTGGCCAGGAAGAGGGACCTCCTTACCAGGACTCGGCAGGCCCGCAACGGCCTGCAGAGAGACAATGTGAGGCTCAAGGAGCACCGTGGACTTCTGGGGAACAGCGTCCTGCTACGGGACTTTGAGGATACGGTGGACGTCTCCGACCAGCTGGAGGAACAGCTGGAAGATCTGAAGTGCCGGCGAGCCGAGATGGTCTTCAGTTGTGGCACGTGGAGGAAGTAGCTGGAGACaacttaatgaatgaatgaacagatGACTGAATTAAGATTTTAAGGTGCGATCAGACTACACAATATCAGCCCGAAAAAAAGCCAGATTCAACAGAGTAGGGTCATCAGGTCGTTGTAAAGCCATTGCCTGTGGTGTGTGCAGACAATGAATAATCCATAAATTATTGTTTCTAGTTGGCAAAAACAATTATGTCGGGTTGAGGTATTCTTTCACCACATTTTGATAGCTGTGAAAATATAATTGCGTCATTAGTTGCACTGAAGCACGTTACATTTAGCAGGAATTAATGTAATTTCCCCAACCCACCATATTACGACCAGAAGACAAATGTCACAAATGAAACAAACCATGGTCAGGACTACTTTACTAAGGCAGTAATGCCCACTGGCCAACATTTCTATACACTCTATCTCAGTGATTCCAAACAGTCGCCAGGGGGTATGGGGAAAGATTATGAAGAAGCTCAACAAAattgaaaataatttaaattatgatttgattaaTCAGCTGTAAGACCTGAACACTACATGTTGTGTAAGAGTGTGTGGGAACCAGTTAGAAAGTTGaaaccattttatttctatagtttaaacaggtagctaaaagtaatggatataTTGTAGAACtaaatagctaaaagtaacgCCTGAACTGCTGAAATAGTTAGCTGAAAGTACAGATTTAACAATTGAAATGATTATCCTAAGGTAGTGGATAAAGgttgtagtctcgcattgccagaccttcctccacagcgctgtggaggaaggtctggcaacgcgagactacacgattgctgaccaaaccaacctaaatatTGGCTGTTCAACAATCATGAAATACATTACATATGGAACATACATTGGGAATGGATGAAGGGGTACGTTGGGTTCACCTGACAGTGCTGTGGGGGTACCTTGGACCAATAGTTGACTTAATAGTGTTTGCCTCCTTAGGAAGAACTTAATGAGGTTGCATTGACTTGGAACAACTACAGAGTCCGTAAAGTCCACAACTCCTGTAACCTCATGGACGTCTCTCCATATTGCTAACGGTCCCTCACCCGCGTGGAGGCAGGAGATTGTTTGCACCATGTGACCTGGAGAAGTCTGTCTCGAAGAGAGTGTGTTCAAGGACTTGCCCATGTGATAAAGATGGGTTCCATGACTGTGTAGACCTTATGTCCGAGTATAATCTGAAGTTATCAAAAGATATGTTTGAAAAACTGAACCTGTAAATCGAACACCGACAGCTAATAAACAGTGAACTAGATGTTGATCATTAA

Function

NR:

description
coiled-coil domain-containing protein 96

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039822939.1 True 2904 mRNA 0.48 3 1488484 1505654

Neighbor

gene id symbol gene type direction distance location
grpel1 grpel1,LOC102799061 coding upstream 10043 1468364 ~ 1478441 (+)
LOC120573524 NA coding upstream 598188 863318 ~ 890296 (+)
LOC120573671 LOC107990212,LOC107990219,LOC107990208 coding upstream 673275 812543 ~ 815209 (+)
LOC120573672 LOC105024657,LOC106023958 coding upstream 694605 790858 ~ 793879 (+)
LOC120573513 NA coding upstream 736829 748644 ~ 751655 (+)
trmt10a trmt10a coding downstream 3147 1508801 ~ 1519565 (+)
spata6l NA coding downstream 17342 1522996 ~ 1543886 (+)
rap1gds1 rap1gds1 coding downstream 77075 1582729 ~ 1620850 (+)
paqr9 paqr9 coding downstream 233669 1739323 ~ 1742369 (+)
LOC120572142 NA coding downstream 533316 2038970 ~ 2102372 (+)
G140419 NA non-coding upstream 5812 1481701 ~ 1482672 (+)
G140392 NA non-coding upstream 51740 1436494 ~ 1436744 (+)
G140384 NA non-coding upstream 88819 1349055 ~ 1399665 (+)
G140376 NA non-coding upstream 118456 1321305 ~ 1370028 (+)
G140388 NA non-coding upstream 127820 1360323 ~ 1360664 (+)
G140433 NA non-coding downstream 14234 1519888 ~ 1521398 (+)
G140435 NA non-coding downstream 18096 1523750 ~ 1524151 (+)
G140463 NA non-coding downstream 68935 1574589 ~ 1574860 (+)
G140516 NA non-coding downstream 225728 1731382 ~ 1788374 (+)
G140518 NA non-coding downstream 243193 1748847 ~ 1751285 (+)
LOC120572292 NA other upstream 865449 621116 ~ 623035 (+)
G140263 NA other upstream 1152308 335882 ~ 336176 (+)
frem1a frem1,LOC106908230,LOC105925506,LOC101079287,LOC108244244 other downstream 171556 1677210 ~ 1725468 (+)
G140582 NA other downstream 423969 1929623 ~ 2030627 (+)
G140594 NA other downstream 516938 2022592 ~ 2032225 (+)
G140613 NA other downstream 549785 2055439 ~ 2059367 (+)
ablim2 ablim2 other downstream 1322398 2828052 ~ 2954690 (+)

Expression


Co-expression Network