ankrd53


Basic Information

Item Value
gene id ankrd53
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 18842076 ~ 18845520 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039823086.1
ATTAGTATATACTGTAGAGAGGGTCAGTATAGCATCTCACAGTTTTACTTTACCAAAAAACtgtttcattatttttcttGTGACTGCAGTTGTCGTAAATCAGGGTTTGTTTCCTGGTTACCACGTTCCCACAGCAACCATGGAACCTGTCAACAAATCCGGAAAACGGAGACGTGGGAAATGTAAAAATAGGAAACTTGTCCACAAAGCTCCCCCAGACGGGAACATGTTTCCAGCTGTTTCTGCTGGGAGCCCAGAGAAGCTGGATGCCAGTGTGAGCAGACAGGGTCTGTCAGCGCTTCACATGGCCTGCCTTCACGGCCAGCTGGCTACTGTTCAGCTCCTGGTGGAGTCCAGGCAGGTGTGGATCAACAGCAGCGATCTCCAGGGTCGCCGGCCTGTTCACATGGTCCTGTCCTCCCGGAGCTCACCCAACACCTCCTTGTGCCTCAAATACCTGCTGGCAGGGGCTGACGTCAACGTCAGTACCACAGATTCAGGGACGAGCCCGCTGCACCTGGCTGCCTCTGAAGGCCTCCTGGACTGCACAGAGATCCTCTTGCAGGCCGGAGCAGATGTCTCGGCCCAGGACAACATGGGACACACGCCTCTGGATTTGGCCCGCATTTGGTGTCACAGGAAGGTGGCAAGGTGTCTGAAAAGCTACAAGTGGCAGTCGGATAAGACGAAAGAAATGCAGGAGAGGAAGCTAGTTCAAACGTTATACAGTGATCTTGTGGATATGGTCAAACTGAATAAGCTCAATAAAAAGACACTTATAGATGAGAAGATGGCAGAATGGGCGAACAAAAAAGGTTTTCCTCTCCTGAAGGATTTCTCCCCCAGAGTCTGGGTGAGCCAGTACCACACTCAGTGCCTCCCATCAGATCAGAACAGTTCTAAACCAAAACATGCCAAGCACCCATTGAAGCACCAGCCAGaaggtcctctggaggacaagAGCCCCTCCACTAAGCAGCAGCCTCCAGCCTCATCCTCCTCCAGACCCTGGACCATCTTCCTGGGCCTCCAGCCAGAGAAACCCCTCAGAGAGCCGGACCTCCGAGACAATGTCATGGTGTGGAGGGACAGCAGCAGCGGGCAGCCTCAGTACACCACCAAGTGGGACAGGACACGTCGCCCCGCCCCTGACGTGCCTCTGGATATCCTAGAGAGGGTGTTGTTTCCCAGAGCATTCCCTTCCAGGATCGCCGCCCCACGGTACTTTGAGCCACAGAACATTGTGGAGGTCCAGCACAGAGGATACCCCCAGGGGCAGAGCACCTCCCCCTGGACAGAGGTGGCCATGCACCTGGCTGAGGTGCTGGAGCCTGGACATTACTGATCATCGCACTCTGTACTGGAAGAGCTCCCACAAGACCTGAaattagtagatgtgtttaagAAATGTATTAAAACTCATCTGGTATTGAAA

Function

GO: NA

KEGG:

id description
K21441 ANKRD53; ankyrin repeat domain-containing protein 53

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039823086.1 True 1435 mRNA 0.53 7 18842076 18845520

Neighbor

gene id symbol gene type direction distance location
trnag-gcc_1 NA coding downstream 104924 18737082 ~ 18737152 (-)
LOC120572304 ipo8 coding downstream 140499 18665191 ~ 18701577 (-)
trnak-cuu_5 NA coding downstream 142219 18699785 ~ 18699857 (-)
trnak-cuu_4 NA coding downstream 142579 18699425 ~ 18699497 (-)
trnan-guu_14 NA coding downstream 143145 18698858 ~ 18698931 (-)
si:dkey-185m8.2 LOC104955459 coding upstream 32601 18878121 ~ 18886053 (-)
LOC120573249 NA coding upstream 57446 18902966 ~ 18912675 (-)
trmt10b trmt10b coding upstream 92598 18938118 ~ 18945452 (-)
trnad-guc_5 NA coding upstream 119846 18965366 ~ 18965437 (-)
trnad-guc_6 NA coding upstream 121422 18966942 ~ 18967013 (-)
G144303 LOC103360597 non-coding downstream 11761 18828464 ~ 18830315 (-)
G144275 NA non-coding downstream 141521 18700209 ~ 18700555 (-)
LOC120573605 NA non-coding downstream 592019 18248443 ~ 18250057 (-)
G144037 NA non-coding downstream 822770 18016249 ~ 18019306 (-)
LOC120572704 NA non-coding downstream 839605 17992145 ~ 18002471 (-)
G144346 NA non-coding upstream 90455 18935975 ~ 18936227 (-)
LOC120572676 NA non-coding upstream 147949 18993469 ~ 19002231 (-)
G144422 NA non-coding upstream 253062 19098582 ~ 19098840 (-)
G144423 NA non-coding upstream 253374 19098894 ~ 19099197 (-)
G144424 NA non-coding upstream 254460 19099980 ~ 19100230 (-)
G144258 NA other downstream 244845 18595102 ~ 18597231 (-)
c14h4orf48 cunh4orf48,lg24h4orf48,lg3h4orf48,c18h4orf48,LOC102785068 other downstream 302453 18536143 ~ 18539623 (-)
mrpl52 mrpl52,LOC102784052 other downstream 669049 18169214 ~ 18173027 (-)
G144058 NA other downstream 718386 18113852 ~ 18123690 (-)
LOC120573700 LOC100692994,LOC102197104,LOC102799729,LOC101170466 other downstream 761272 17973899 ~ 18080804 (-)
clcn3 clcn3 other upstream 117346 18962866 ~ 19056782 (-)
prkd4 LOC103376196 other upstream 402430 19247950 ~ 19266353 (-)
LOC120572670 NA other upstream 437413 19282933 ~ 19353306 (-)
si:cabz01074946.1 NA other upstream 811563 19657083 ~ 19665792 (-)
G144730 LOC100695354,LOC106632790,LOC105940461,LOC104965881,LOC101481059,LOC106632521,LOC103369240,LOC102791106 other upstream 931160 19776680 ~ 19797530 (-)

Expression


Co-expression Network