LOC120573393


Basic Information

Item Value
gene id LOC120573393
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 38586072 ~ 38589499 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039823106.1
attttaacattgtgATCATTGCTGGATTTCAGGacaagagaggaatggaggaggacaaccagaaccaggagcagcggagcaacaaggtccccagaagacgagcagcagactgggactctgataCCAACGAGGTCCCCAGgagaccagcagcagactgggactctgataCCAACGAGGTCCCCAGgagaccagcagcagactgggactctgataCCAACGAGGTCCCCAGgagaccagcagcagactgggactctgaAACCAACGAGGTCCCCAGgagaccagcagcagactgggactctgataccaacgaggtccccagaagacaagcagcagactgggactctgataCCAACGAGGTCCCCAGAGGACaagcagcagactgggactctgataCCAACGAGGTCCCCAGgagaccagcagcagactgggactctgataccaacgaggtccccagaagaccagctgcagactgggactctgataCCAACGAGGTCCCAAGGAGACCAGCAGCAGACTCAGACTCTGATACCAACGAGGTCCCCAGGAGACCAGCAGCAGACTCAGACTCTGATAGCAGccatgttcagaaacggagaggaagaaagggacCCAAACGTCACCACTGTCAACACTGTGACAAGTCCTTCACAAGATCTGATcatttaaagattcatcataGAGTTCATACTGGAGACaaaccttacagctgtgatctatGTGGGACAGCTTTCGCACAACGGAGTTCCCTAAAAagccatcaacgcattcacactgaagATAAACCTTACAgatgtgatcaatgtgggacaGCTTTCGCACAACTAAGTTCCCTAAAAATGCATCAAAGCcttcacactggagataaaccttacagctgtgatgaatgtggggcagctttcgcACGACAGAGTACCCTAAACAGACATCAACTCATTCACACTGGATATaaaccttacagctgtgatcaatgcgGGAAAACCTTTTCTACGAGTAGTGTACTACAACTCCACCGAAGTGTTCACACTGgcgagaagccgtactggtgtgatcaatgtgggaaaATGTTTGCTCAGAGTGGCAACCTTAAAAaacaccagcgcattcacactggagagaagccgtactcgtgtgaacaatgtgggaaaacgttTTCTGAGAGTAGTAACCTTAAAgctcaccagcgcattcacatgGCCTCGTAGTGAACATGTTTcagagccaagctgtttcctcctgcctcctcctcatgccctgatagctgagttgttatattctgatcttctctccacattgaaggctgaccagcAGTAACTTTATCTTCTGAACACCATGGATGTTATCCTGGCTATGACTACATATTACGCTCCCTCCCTTTCAAGGGATTAATTCCACTCAAAATTAGCTTTTATTCCTGTAATAAAATATTCTGAGTTCCGGGTTCAACTGCTAGCGCTATTTATCTAATGCTGCAACGAAGGAGTATTTTTTCataatttaagaaaatctcATCACTATTTACTAAGGTAAAGTCAAGTTGCTGAAATATTTAGTCTATTGT

Function

GO:

id name namespace
GO:0008094 DNA-dependent ATPase activity molecular_function

KEGG:

id description
ko03013 Nucleocytoplasmic transport

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039823106.1 True 1558 mRNA 0.48 2 38586072 38589499

Neighbor

gene id symbol gene type direction distance location
LOC120573390 NA coding upstream 24327 38543118 ~ 38561745 (+)
LOC120573403 NA coding upstream 129893 38452003 ~ 38456179 (+)
LOC120573404 NA coding upstream 157414 38424877 ~ 38428658 (+)
LOC120573398 NA coding upstream 333184 38229862 ~ 38252888 (+)
LOC120573389 LOC108250633 coding upstream 479877 38064701 ~ 38106195 (+)
LOC120573446 NA coding downstream 186954 38776453 ~ 38791913 (+)
LOC120573707 NA coding downstream 362543 38952042 ~ 38955968 (+)
G150075 NA non-coding upstream 346 38585468 ~ 38585726 (+)
G150068 NA non-coding upstream 88806 38496536 ~ 38497266 (+)
G150063 NA non-coding upstream 91372 38474231 ~ 38494700 (+)
G150066 NA non-coding upstream 101099 38483703 ~ 38484973 (+)
LOC120573410 NA non-coding upstream 103882 38457241 ~ 38482190 (+)
G150084 NA non-coding downstream 25036 38614535 ~ 38614808 (+)
G150093 NA non-coding downstream 100204 38689703 ~ 38693199 (+)
G150114 NA non-coding downstream 173116 38762615 ~ 38763280 (+)
G150105 NA non-coding downstream 175640 38765139 ~ 38765851 (+)
G150118 NA non-coding downstream 188983 38778482 ~ 38778876 (+)
G150060 NA other upstream 64569 38463142 ~ 38521503 (+)
G149880 NA other upstream 128476 38169476 ~ 38457596 (+)
LOC120573406 NA other upstream 227215 38264437 ~ 38358857 (+)
G149853 NA other upstream 734191 37743174 ~ 37851881 (+)
G149843 LOC107105148 other upstream 904963 37676995 ~ 37681109 (+)
G150081 NA other downstream 92832 38682331 ~ 38728091 (+)
G150139 NA other downstream 291072 38880571 ~ 38883270 (+)
LOC120572657 NA other downstream 325920 38915419 ~ 38930312 (+)
G150148 NA other downstream 345909 38935408 ~ 38936600 (+)
LOC120572658 LOC102790720,LOC101469544,LOC102307310 other downstream 483859 39073358 ~ 39090901 (+)

Expression


Co-expression Network