LOC120573441


Basic Information

Item Value
gene id LOC120573441
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 20543299 ~ 20547280 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039823167.1
TCGCCTTAAACAACTTCTCCATGAAGATGCTAGCTGTGTCCGTACTTGTTACAGCCATGATGGCTCTGACTACTGTTCTTCCAGAGGCAGAGGCCGCTGCTGTGAGAGGCCAAACAATTCAACCAAAAGATCATGTTGTCAAGAGGTCCATACTATGCGAATTTGGTTGGTCTCTGTACGGAGGCCGCTGTTTCCGCTACTTTCCAGGAGCCACCAGCTGGGCTGTGGCTGAGAGATCCTGTCTCACTTTCAATTCAAACCTAGCATCTGTGCACGACAAAGATGAGGATCATTGGATTCAGCGTTTGGCAGGCCTCAACGCTGCGTGGATCGGAGGCTCTGATGCACAACAaGAGGGTTTTTGGTTCTGGTCTGACGGTACACCTTTCAACTATGTCAACTGGTGTGGAGGAGAGCCTAATAACCTTAGAGGCAGTCAGCACTGTCTACAAATCAATTGGACAGATAACAAGTGCTGGGACGACGAAAACTGCAATGTTGGGAGAGGATTTGTCTGTGTCAGGAAACGCTGATGATTCCTGGACCAACACAGAGGCATGAAGTACTTACCATGATGTGCAAACCTTGGAAGATGTGTCTGTGTCCATGTTTGTGCACTCGTCTGTATTTGTGTCTTCAGTCTCATACATAACCTAAAGTCTTTAACTCTCTAATCAAATATTTTTTAGCTATCGCTGTCGCTAGACGtttcagtgagggtgctctgaaatTTTGAATTTCCCTTGACACAAATAGCCTATCATTACACACACTCCTGCAGATGCCCACCCACCTCTGTGGTTTACTAAGTGAGCGAAAGAGAGAGATTGATTTGAAGTTGCAGCTACAACAGCACCATAGAACTCTGATTAGCccaccaaacatatttcaaataccagccaacaagCCGGGTTCAAAAaatcattactgcagctctcatACATTGGCTCAGAAGAGTAGCCTAATGCAGCAggccaaatacaccacacatagtcaagcacacacataaaaacacacgcgCATGTATCCTCACAGTTTTCACACTTGCAAATATGGTCAAAATAATGTAGTCATATGTCAATGTAGTGacttaatatatctaaataagcCACTGAGGGTGAACATGTTTTCTGGGCTAAAAATATACCAATGTCCTGTATAACTTTAGATTTGGTGATCCATTTTCattcacatttctgtaaaacacatgTTCACTGTAATGTTCTTCTACGAGACAGAGATACGAGTAAAGTTCTTGCATGGACCCCTATCAGCTGACTCACCCACTGTGGCCTGGCTGTGCGATCCCCTGGTCTAACGTCATTTACAGCAGGGTGACGTTAAGCATCCTCAGCAGCAATCACGAAAAACGAGCGCCGTGCAAATTCCCATACTGTCTATAGAGATTCcacgttgcacggcgttcgtactcatcggattttctcttgatcgatatacggcttatgcgataaacgctgatgga

Function

GO: NA

KEGG:

id description
ko05322 Systemic lupus erythematosus

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039823167.1 True 1483 mRNA 0.45 7 20543299 20547280

Neighbor

gene id symbol gene type direction distance location
LOC120573440 NA coding downstream 2954 20534901 ~ 20540345 (-)
LOC120573438 NA coding downstream 23854 20516765 ~ 20519445 (-)
LOC120573477 NA coding downstream 298334 20243529 ~ 20244965 (-)
LOC120572322 NA coding downstream 369897 20168039 ~ 20173402 (-)
si:ch211-63p21.1 LOC103371025,LOC102193822,LOC102788031,LOC101475184,LOC100709095 coding downstream 449860 20087447 ~ 20093439 (-)
LOC120573443 NA coding upstream 11772 20559052 ~ 20560773 (-)
LOC120573444 NA coding upstream 19124 20566404 ~ 20570193 (-)
LOC120573445 NA coding upstream 25365 20572645 ~ 20575041 (-)
casq1b casq1,LOC103355794,LOC103384793,LOC106577953 coding upstream 29990 20577270 ~ 20607174 (-)
mrpl48 mrpl48,LOC102799393,LOC102786259 coding upstream 183534 20730814 ~ 20737802 (-)
LOC120573439 NA non-coding downstream 21174 20521170 ~ 20522125 (-)
G144910 NA non-coding downstream 28610 20476709 ~ 20514689 (-)
G144908 NA non-coding downstream 31684 20508062 ~ 20511615 (-)
G144895 NA non-coding downstream 87174 20448049 ~ 20456125 (-)
G144884 NA non-coding downstream 143635 20375642 ~ 20399664 (-)
G144994 NA non-coding upstream 127431 20674711 ~ 20694672 (-)
G144996 NA non-coding upstream 132630 20679910 ~ 20710773 (-)
LOC120573348 NA non-coding upstream 236289 20783569 ~ 20786389 (-)
G145023 NA non-coding upstream 296294 20843574 ~ 20845253 (-)
G145076 NA non-coding upstream 383786 20931066 ~ 20931721 (-)
G144730 LOC100695354,LOC106632790,LOC105940461,LOC104965881,LOC101481059,LOC106632521,LOC103369240,LOC102791106 other downstream 745769 19776680 ~ 19797530 (-)
si:cabz01074946.1 NA other downstream 877507 19657083 ~ 19665792 (-)
LOC120572670 NA other downstream 1189993 19282933 ~ 19353306 (-)
prkd4 LOC103376196 other downstream 1276946 19247950 ~ 19266353 (-)
clcn3 clcn3 other downstream 1486517 18962866 ~ 19056782 (-)
LOC120573300 slc12a6 other upstream 280003 20827283 ~ 20863889 (-)
nop10 NA other upstream 317477 20864757 ~ 20867106 (-)
LOC120573168 LOC103355779 other upstream 359175 20906455 ~ 20929559 (-)
si:dkey-172j4.3 LOC102306481,LOC103363024,LOC100708735,LOC101468909,LOC102781820,LOC101073787,LOC108246481,LOC106609052 other upstream 803962 21351242 ~ 21438456 (-)
G145209 NA other upstream 856575 21403855 ~ 21434195 (-)

Expression


Co-expression Network