si:dkey-19b23.8 (LOC103361359,LOC104965567)


Basic Information

Item Value
gene id si:dkey-19b23.8
gene name LOC103361359,LOC104965567
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 17864831 ~ 17870686 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039823201.1
GATTCACTCAACTCATTGACGTCGAGCAGGGAGGGAACGGAGGGCATGATTCAGTGTGTACATGAACGCTCTCCGTCTGTATACGTCTCGTTTATTTGCGCACGAGGAACACTGAGCTTACGGAAAACCAGTTACCGGCAGTGCGCttaatcgattaattgtttATATATACCTTTTAATTGACAGTTAAACGGGTTTAGTGTGAACGTGCAGGACAGGAGACTTCCTCCTGCCCAGTGTatgtttaaacaaaaaatatcaCTGAACTCTGCGGTTCACCTGAGGCGCACGAGGACATCGTTTGCATGAAACTGTGGCCAGataAAAGCAGTGGATGCAACTGTGCTCCATTTATAGAAGAAAAGTGGAAGAGTGGGAGAGGCTCTGAAGAGGACCAGCTGACCACCGGCAGATACGCCTCAGCTAAAATTTCCTCCAAACCCAGCCTGAAACGTACCATGTCTCTCAGCACATTTCACCTCATGCAGACTCTTAAGAACTCTCCGGCTGCGCTACGTCGCCGCTTTCGCCGCGACCGCACAGAATCCTTATCCCACGGCGACCCTCTTTTTAAGGTCCACTACCTGGGCACAGAGAAAATCTTCTCCCTGGATCGAGAGCAGGCCCACGACGCTATTAGCCGCCTGCTGGAAGGTATCGCAAATGGGAAAAAGCTGAGCAAAGATCACGCCCTGGTGGTGCGCCCAAGGTACGTCGAGGTCAAGGAACTGAGTACAGGTCGGCAGCTAACTAAGACGTACCTGCAGGACATTGCGTACTGTGCCGCAGATGCCAACCGGCCCAATGTCTTTTTGTACATCTGCAAACATCAGGGGCAGCAGCTGCAGTGTCGAGTGTTCTGGTGCAGCCGTGCAGAGCGGGCACTAGACATGACGGCTTGTCTGGCACATTCTTTCCAGCGGGCACTGAGCGACTTGCAGGACGGCTCGGCCACGCTGCAGCCAGGAGAGGTGAAGGGGAAACGCGGAGAGGAGTCGCCCAAATCTGCCGCCATCTCAAAGAGCTCTACGCTGCCATCCAGTCTGGGAAAAGttcgCTGGAAGAAGAGGGGCTCTGTGTCCCACAGCCCTCTCCGAGCCATCACGAGACGAGGATCTGCCTCAGACAGCTGGAACTGAACTTTTGAATTTTACCCTTTTTTAAACATGGGACCGCATTAACCTGATGACGACCTCAAAGATGACAGCACTGATCGGAGGGAGGGAGTGATTACGAGACAGAAGGACAAAGGGGATGAAGTGGGGAAAGTCCATATTTGGATGTATGAGGACTTGTGAGATGATGTTGCCATAATCGGTGAGCGTTTTGACTTGAAGGTTTTTGACGCAGCAAAGTTGTCCGTTGACTTTTGCAATTGTGGCGTCTAATGTAGCACAAAATGCTGTTGACTGCTGTCTTTGTTCACCTGCCAACAACTATGGTAGGACTCGTGACTGGCTGCAAGCCATTTGTGGACCAGACTGGATCATTTccgtacttttttttttttgggttggcTTATTTGTTTCTAAGTAGTCTACTTGATACTTAAGCCACCGAAGAGTTTAGTCTGTTGGAATAGGACAATTAAACCAACCATGATAGCAGCTGTTGGCCAAATGATCAACAGATGAAAGTCAAAAACTGGAAAAAGAcaacaaggtttttttttgttttgtttttaaggctGACTTTTATTTAACTGGCATTTGTGACAGGTTGTGATtatcattttattgtttttaacccTGTGGCACTACTAGgtttctcttcctttttttaattttttttaatttctttttaaattgaatgGACAAAACCACCCTTTTAATCTATGTTAGAGTTTTGGCAAAGATTACACAGATGCCAagatagagagggggaaaaTGCAGGCGTGTCATACAAAGTAAAAATGATTAGTCTGTAATGAACATAAATGCAGTTAGTAATTTCTGAGCACTTTGTCAAATTTGACATCTGAACACATCAGTTTAATTCCAAATGTCTTACGTTTTTAAGAGGTCAGTAGCAGCAGCACCTGGATTGTAGATGGAAAAAATTGACCCTAGCAGAACGTGCAGAGTCGACAAAATCCTCCCCTCAtcctgcaaaaacaaaaaacagatccTATCTGTCCACTGCGATTCATTATTTGCATTTATGTGGGGTAAAGCACACTCTGCCATGACTTGCGTTTTGTTTGCGTCCGAACACTGGGAACGCTGTGTTCCCATGTGAAGCCTCTGTGTGGAATGCGCAGCCATGCACCTGCATTCCaataggaggaggaggaaggggggggggggttgtgaaAATGTCCAACCATGACTTTGCATATAGAGCAGCCTCTTCAGTAGATGCTACAGTGTGCTTCTTATGCTGAGCCCTCGACTTGTTCGCATTCCCAAAGCCATAAAAGGTGCCTCAACTACCTAAGTTAAAATGACGATTATAGGCATTGATACGTGCAGTATTGCATAACGTGCTCTCATGATGGTGATTTCTGTCTTATGGTTTACAAATGAGAGACTTGATGATTAGTGGTACACCCTGAGGCTACCattcattttgtgttttctgaccaaaaCTAAGCTAGAAATGttgcctattttatttttttaaccggAAAGACGTTTTTGACTGATGTGCCACAAGGTTTTTATCAgttaattttaacattttgtacTCGTGATGTGTTGTAATTACAAACGGCGCAGCCCCAATCTCAGAAAAGGGGTTCAAGTGCCTGCTCTATTTTATTGTACAtatttaattatgtattttatgAAATATTAAAACCTTTTATACAACA

Function

NR:

description
uncharacterized protein LOC110500571 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039823201.1 True 2812 mRNA 0.45 3 17864831 17870686

Neighbor

gene id symbol gene type direction distance location
stim2b stim2,LOC106964335 coding downstream 134432 17687074 ~ 17730399 (-)
pcdh7b pcdh7,LOC102786590 coding downstream 639299 17119707 ~ 17225532 (-)
dthd1 NA coding downstream 1302705 16549965 ~ 16562126 (-)
zgc:194930 NA coding downstream 1471356 16370017 ~ 16393475 (-)
LOC120573527 NA coding downstream 1545339 16316592 ~ 16319492 (-)
chd3 chd3 coding upstream 35414 17906100 ~ 17949657 (-)
dnajc3b LOC103361354,LOC104927603,LOC100712384,LOC101476475 coding upstream 86095 17956781 ~ 17966143 (-)
cldn15a cldn15 coding upstream 96092 17966778 ~ 17971356 (-)
fis1 fis1 coding upstream 105267 17975953 ~ 17978588 (-)
zgc:103586 LOC104927619,LOC101475882,LOC102312414,LOC100699134 coding upstream 108033 17978719 ~ 17981175 (-)
G143898 NA non-coding downstream 101126 17762380 ~ 17763705 (-)
LOC120573415 NA non-coding downstream 179878 17682075 ~ 17684953 (-)
G143852 NA non-coding downstream 617198 17247376 ~ 17247633 (-)
G143837 NA non-coding downstream 896661 16967952 ~ 16968170 (-)
G143836 NA non-coding downstream 901099 16963489 ~ 16963732 (-)
G144013 NA non-coding upstream 16592 17887278 ~ 17889652 (-)
LOC120572704 NA non-coding upstream 121459 17992145 ~ 18002471 (-)
G144037 NA non-coding upstream 145563 18016249 ~ 18019306 (-)
LOC120573605 NA non-coding upstream 377757 18248443 ~ 18250057 (-)
G144275 NA non-coding upstream 829523 18700209 ~ 18700555 (-)
smim20 NA other downstream 10994 17852371 ~ 17853837 (-)
rbpjb rbpj,LOC106534282 other downstream 43753 17764186 ~ 17821078 (-)
tbc1d19 tbc1d19 other downstream 111816 17734332 ~ 17753015 (-)
LOC120572513 NA other downstream 615199 17230599 ~ 17249632 (-)
LOC120572710 nwd2 other downstream 1409903 16397933 ~ 16454928 (-)
LOC120573700 LOC100692994,LOC102197104,LOC102799729,LOC101170466 other upstream 103213 17973899 ~ 18080804 (-)
G144058 NA other upstream 243166 18113852 ~ 18123690 (-)
mrpl52 mrpl52,LOC102784052 other upstream 298528 18169214 ~ 18173027 (-)
c14h4orf48 cunh4orf48,lg24h4orf48,lg3h4orf48,c18h4orf48,LOC102785068 other upstream 665457 18536143 ~ 18539623 (-)
G144258 NA other upstream 724416 18595102 ~ 18597231 (-)

Expression


Co-expression Network