LOC120573508 (LOC103361692)


Basic Information

Item Value
gene id LOC120573508
gene name LOC103361692
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 1660137 ~ 1664945 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039823278.1
TGAACATTTCAGCAGCAATTTGACAGTATAAGAAGTGCAAATACAAGATCACATCAGAGTGCGTGGAAATCATTTAAAGTCAGAATGTTCCGAGGAGTCTGTTTGGGACTTTTTTATATAGTGCTGGTCTTCCTCCTGCTGTGCTCAGTCACAGGCTTGCACCTGATGGATCACCGTAGAGATGCAGAGGATGACCAGGAGCGCAACAAAGCCATTTTGGAAATGCTTCATATCAATAAAGTGTCTGCGAGCCATCAGGCTAAGCCACATCCGTACATGAGGGGGATCTATCAGCGTTTGGACTCACTGGAGGCCCAAGACTTTGGGAGTTCAGATGGAATGCTGGTGCAGAGTTTTCGTAGTGTTGTTGGTCCTCCAGGATGGATCTGGTTCAATGTCAGCGGCCTGAACCCCTCCATGCTGGGTGCAGAGCTGGTTCTGTTCAGGAAAACCCTGCACCCGCGTCCCATCAGTGTGACTGTTACCCTGCACAGTGTCACAGCTTCACAGGGAGCTCTGAAGGAAAGGCCTGCCCTCGAGGAGAGACTGCTGACCCTGGACCAGCGCTCCTCATCTGGATATGATGTGTTTGACGTGTCAGCTGTTCTGCCTGTGAAGCCTCTGGAGGTGGTGGGCTTTCAGCTGCGTTATACAGACGAGAGTGGGAGTCTGGTCCTTCATGAAGCCCTGACACAGACTCTTTACTGTCTGAACAGAGGCTCACTGAGTGAACCCTTACTGGTGCTTTACCAGTCACATCCTCTCCACATCTAACTCTGTGATAATATGTGATCTGTGATTGATATGGTCGATATTATGCAGAATGTTTCAGCACAAAATTGGCAAGGGGGTGATGACATAATATATTCACGCCAAGGTTTAAAGGTccaacgtgtttagttgttcattatcaaaatataatatacgccc
>XM_039823279.1
AAGGCAGAGACTGTTTCACTGCAGATGCGTGAGGAAATCCCGGCGATCCCTTTAAGTCCTGAGGAATTTCTAATCCTGCATCAATGAGAGTATTCTGGCAGGGAACATCACTGCCGGGTCCTCCAGGATGGATCTGGTTCAATGTCAGCGGCCTGAACCCCTCCATGCTGGGTGCAGAGCTGGTTCTGTTCAGGAAAACCCTGCACCCGCGTCCCATCAGTGTGACTGTTACCCTGCACAGTGTCACAGCTTCACAGGGAGCTCTGAAGGAAAGGCCTGCCCTCGAGGAGAGACTGCTGACCCTGGACCAGCGCTCCTCATCTGGATATGATGTGTTTGACGTGTCAGCTGTTCTGCCTGTGAAGCCTCTGGAGGTGGTGGGCTTTCAGCTGCGTTATACAGACGAGAGTGGGAGTCTGGTCCTTCATGAAGCCCTGACACAGACTCTTTACTGTCTGAACAGAGGCTCACTGAGTGAACCCTTACTGGTGCTTTACCAGTCACATCCTCTCCACATCTAACTCTGTGATAATATGTGATCTGTGATTGATATGGTCGATATTATGCAGAATGTTTCAGCACAAAATTGGCAAGGGGGTGATGACATAATATATTCACGCCAAGGTTTAAAGGTccaacgtgtttagttgttcattatcaaaatataatatacgccc

Function

NR:

description
PREDICTED: uncharacterized protein LOC103361692

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039823278.1 True 930 mRNA 0.48 2 1660137 1664945
XM_039823279.1 False 677 mRNA 0.49 2 1660137 1661012

Neighbor

gene id symbol gene type direction distance location
slc1a1 slc1a1 coding downstream 86013 1550528 ~ 1574124 (-)
LOC120573289 NA coding downstream 159821 1492274 ~ 1500316 (-)
sorcs2 sorcs2 coding downstream 230420 1018258 ~ 1429717 (-)
LOC120573525 mrps28 coding downstream 746457 906545 ~ 913680 (-)
LOC120573590 NA coding downstream 1053419 600634 ~ 606718 (-)
aco1 aco1 coding upstream 84574 1749519 ~ 1774918 (-)
LOC120573473 NA coding upstream 218957 1883902 ~ 1885687 (-)
LOC120572242 NA coding upstream 354667 2019612 ~ 2022367 (-)
pde5ab pde5a coding upstream 1014000 2678945 ~ 2797531 (-)
si:dkey-219e21.4 NA coding upstream 1147610 2812555 ~ 2818659 (-)
G140454 NA non-coding downstream 129187 1530235 ~ 1530950 (-)
G140451 NA non-coding downstream 138298 1519821 ~ 1521839 (-)
G140437 NA non-coding downstream 177432 1481738 ~ 1482705 (-)
G140418 grpel1,LOC102799061 non-coding downstream 181324 1468232 ~ 1478813 (-)
G140413 NA non-coding downstream 197272 1461638 ~ 1462865 (-)
G140514 LOC106908230,LOC105925506,LOC101079287,LOC100690429 non-coding upstream 54980 1719925 ~ 1725333 (-)
LOC120573239 NA non-coding upstream 110892 1775837 ~ 1782596 (-)
G140534 NA non-coding upstream 122359 1787304 ~ 1788089 (-)
G140535 NA non-coding upstream 125765 1790710 ~ 1790942 (-)
G140536 NA non-coding upstream 126095 1791040 ~ 1791662 (-)
tspan5a LOC100711712,LOC102299272,LOC102195201,LOC105938388,LOC103480072 other downstream 10705 1623259 ~ 1649432 (-)
tada2b tada2b other downstream 171711 1482789 ~ 1488426 (-)
G140274 NA other downstream 1208467 443550 ~ 451670 (-)
LOC120573528 NA other upstream 262187 1927132 ~ 2032506 (-)
G140615 NA other upstream 386536 2051481 ~ 2058191 (-)
camk2d1 LOC100695450,LOC101472930 other upstream 789121 2454066 ~ 2573483 (-)
arsj arsj other upstream 932889 2597834 ~ 2622100 (-)
LOC120573530 NA other upstream 1474176 3139121 ~ 3143189 (-)

Expression


Co-expression Network