Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120573525 |
| gene name | mrps28 |
| gene type | coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053125.1 |
| NCBI id | CM020922.1 |
| chromosome length | 39125861 |
| location | 906545 ~ 913680 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| mrps28 | Predicted to be part of mitochondrial small ribosomal subunit. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 47. Orthologous to human MRPS28 (mitochondrial ribosomal protein S28). |
| description |
|---|
| PREDICTED: 28S ribosomal protein S28, mitochondrial |
| id | description |
|---|---|
| K17407 | MRPS28; small subunit ribosomal protein S28 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_039823311.1 | True | 534 | mRNA | 0.61 | 2 | 906545 | 913680 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120573590 | NA | coding | downstream | 299827 | 600634 ~ 606718 (-) |
| LOC120573587 | NA | coding | downstream | 768308 | 135443 ~ 138237 (-) |
| sorcs2 | sorcs2 | coding | upstream | 104578 | 1018258 ~ 1429717 (-) |
| LOC120573289 | NA | coding | upstream | 578594 | 1492274 ~ 1500316 (-) |
| slc1a1 | slc1a1 | coding | upstream | 636848 | 1550528 ~ 1574124 (-) |
| LOC120573508 | LOC103361692 | coding | upstream | 746457 | 1660137 ~ 1664945 (-) |
| aco1 | aco1 | coding | upstream | 835839 | 1749519 ~ 1774918 (-) |
| G140348 | NA | non-coding | downstream | 2906 | 903408 ~ 903639 (-) |
| G140338 | NA | non-coding | downstream | 30199 | 875822 ~ 876346 (-) |
| G140314 | NA | non-coding | downstream | 159685 | 746588 ~ 746860 (-) |
| G140308 | NA | non-coding | downstream | 272700 | 633646 ~ 633845 (-) |
| G140307 | NA | non-coding | downstream | 273598 | 632727 ~ 632947 (-) |
| G140355 | NA | non-coding | upstream | 38476 | 952156 ~ 952472 (-) |
| G140360 | NA | non-coding | upstream | 99285 | 1012965 ~ 1013182 (-) |
| LOC120573176 | NA | non-coding | upstream | 122392 | 1036072 ~ 1036678 (-) |
| G140398 | NA | non-coding | upstream | 153777 | 1067457 ~ 1067906 (-) |
| G140400 | NA | non-coding | upstream | 203306 | 1116986 ~ 1154711 (-) |
| G140274 | NA | other | downstream | 454875 | 443550 ~ 451670 (-) |
| tada2b | tada2b | other | upstream | 569109 | 1482789 ~ 1488426 (-) |
| tspan5a | LOC100711712,LOC102299272,LOC102195201,LOC105938388,LOC103480072 | other | upstream | 709579 | 1623259 ~ 1649432 (-) |
| LOC120573528 | NA | other | upstream | 1013452 | 1927132 ~ 2032506 (-) |
| G140615 | NA | other | upstream | 1137801 | 2051481 ~ 2058191 (-) |
| camk2d1 | LOC100695450,LOC101472930 | other | upstream | 1540386 | 2454066 ~ 2573483 (-) |
