LOC120573582


Basic Information

Item Value
gene id LOC120573582
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 22581320 ~ 22605991 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039823390.1
AGAAACCCTCTCAGAAGGAGGTGTGACTCAGCCGTGGAAGGACGAGCAACTCCTTCACGCGCGGATGGAAACTGCTGGAGTCATGGATCAATCAACAAAATGTATTGATTACAGCAGCATTCAAATGATTAGAAGTCTGATCTACTGATTTAAAGATCATCGGATCGGTTGGACGATCGAAAGCCTTGGTGACTGATTTGAAGCCAGATCAACTGTTCGCAGGTCTGATTGGAAGCCTTGATTTCAAGTCTGATTAACCGATCGGAATCCTGAGAAAAGTCTCACTCATTTGATGCCTTAATTGACTGATTTGACACTTGATTGGTTGAGACTGATTGAGTGCTTGGAATCCTAATTGACTTATTGGAAGTCTGTCAGTTTTGACCCCTGGTTAGAAGCGATTGATTGACTTATTGGAAGCGACTGATTGGAAGCTGTGTTTGAGTGGAGTGTTGTTGGCGCCAGGATGAGTGCAGCAGGGGAGGTGGTGTGTGAGGGCTGGCTCAGAAAGTCACCACCAGAGAAGAAGCTCCGCCGCTATGCATGGAAGAGGCGTTGGTTCGTGCTGCGAAGCGGTCGGCTGAGCGGGGAGCCGGACGTCCTGCAGTACTTCAAGAATCAGCAGTCCCGCCGGCCAATCAGGACCATCAACCTGAACCTGTGTGAACAGGTGGATGCCGGCCTGACGTTCACAAAGAAGGAGCTGGAGAGCAGCTTCGTCTTCGACCTGAGGACGGAGGAGAGGACCTGGTACCTGGTAGCCGAGTCTGAGGAGGACATGAACCGCTGGGTGTCCTCCATCTGCCTGCTCTGTGGCTTCAACCCCACTGATGACGTCCCGGCGAAACTTCCTGCGTCTGGCTCGTCCTCCATCACAGCGCTGACCCCGACTGCCTCAATCACCATGGTAACAGGGACAGTCCCACCCCCCTATGACCCGGTGAGTGTGCGAAACCTGGAGCACGATGGAAATGCAGAAGAAGACTACCTGTGGTTATCACACTGCCAGAGTCACATCaggcCTCCTTTAGGTTCCTCCACCTCTCTTGAAACTGACTACAACGACAACCTCTACCCTCCTCCCTCCAccaactcctcctcctcttcctcctcctcctcctctccttccctccttcccaaTGGCCTCCCActtccatcctcctcctcctcctcctcttcctccggcTTCAGGGCAGCCCCTTGGACCGTCGCCTCCATGACGGGCCCTTTGAGCCAGTCTCTGGATGCCAGcatgacctctgacctgcaGAGACGAGCCCACCGAGCTCGTTGTCACCCCTCTCCCCATCCCAGGAAGCACTCCCTGGACTTCCACCTGCGACCTGTTGTGATACCTCTCAGCGatgacacacactctgcagTACATCCAAATACACACTCAAACACCACCAGTGTTTACCAGATCCCTCGTCCGTCATCCGCCGTTCAACCTCGACCTCCTCTCCGACGATCCTCTACCCCTTGTGTGGACTCCCTAACCCAGGCGGAGCTCCACGCCTCCACCCCGACTCCTCCGCCACGCCCGCCCAAGCCTCAGAACATACCAGCGCAGGGAGAGGGTTCAGGTGTGGGCACCAGGTCAGCCACGCTCCCCCGGTCCACCTCGGAATCAGAGAGGAGGGATGGATATCTGGAGGGAGGGCTGCCAAGGAGCAACACTATCACTACGtcaggacgcacgcacacagGTTATGACACTTTTTGCATCCCTCGGTCTCTGTCCGACCGAGCGAGCATGTTTGAGTTCAGCGAGAGCTTCAGCAGTTACTTCtTTAATAAAGGCATGGTACCTCTGAGTAGTGTTTGCTCTGAGGATGATGATGTGGACGACAACTATGTTCCCATGAGCGCTGCCACCACTGAGCCTCCTGTCGCACCAAGGGTGCACCCACATCCTCCCTCTGACTCCTCTGTCCAGCTCCAGGATTCCAACTATGTCCCCATGACCCCCCTCACCCCTTCCCTTCCCGTCCATCCCACCCATGCCACAGGCGACCTAGCGTCCCTGGGAAGGCAAGTCCCACCACCCGCCCACCTGGGTTTTCGTAATTCCCCGCTGACTCCCGCCGCTCCCGGCACCCCGCCGCTCCGGAGGAACACCGTGAACCCTGAGGTGAAGGCCATGCCCCCTCCCATCCACCGCAACCTGAAACCACAACGCAGAGGAGTTTGTCAGCCTGCAGAGAGAACGGACGTCCAGACTGCTGGAGAGTCGACGCACAAGACAAGAGGGAAACCAGCTCCTCTGGACATCACTCCAGTGCAGCAGGATTGGCAGGAAGTCCCGCCCCCTGTTCGCTCGCCCGTCACTCGAACCTTCACACGAGAtccATCCAGTCATCGGACTGCCAGGCCGCCCTCTGCTCACAGCTCGTCCCCCTCCTCCGACTCCGATGACACTGATGACAGTTACGTCGCCATGACAACAACTCCCAACCTCAGTTTCAGCACCGACGAGATGtctCTGAGGCTCATGCTGCACCGGGCCTCAGAGGGCGGAGTCAGCAGCCCATTGCTACGGCGAGCCAGAGGCGACAAACAGGTGGAgtacctggacctggacctcCACACTGGGCGATCCACTCCaacaagacagAAACGCTGCACGGCAGAAGGTGGAGGCAGTGGCGGAAGCGAGCAGGCAGCAGCGGGCGAGGAGCGTGCACGGGGCGGGCGTACACGTGTGGACTACGTGGTGGTGgaccccaaaagaaccaaggcCCTGAGGAGCACCAGAGAGGCATGGCATGATGGGAGGATGTCCACGGAGAAGGAGAAATGCTAgagatgcacaaacacacacagtcatgctGTTCTCAAGCAGCACCGAGTTTTTGCTTATAAACTAATGCATTCCTTGCTTCCCTTCTCCTTTCTTAACATGCTAAAAACTCAAATCACTGTTTGATACTCATGCGGTCATTCAAAGTCATttcacaaaaagaagaaaaacagaaagatgTCAGTGATAACAGCTGTATTGTGTGATCAGCTGGGTTGAAACTCAAAACTCAGAAAGCTCAGTTTCACATTGCTGCTACGATGAATTACTCAAACATGTCGAAGGTCGACGATCACGCATCggtgtttttacattttcaaatgtgtCCAATGTGGAGGGAGTTTTGCATAGTACAGCTTTTGTTCATGGAAAGAAATAGAAGGAAAAGTGTTGTGATCCACAGCATGTCAAACGTGGTTCTGCATCAACATATTTTGGCTAAAATTAGCTTCAGTCCAGCTTCACGTAGTCAGAGAAACTAAGGATCTTCAACTCCAGCtgagtttttaatttttaattagaGTTCTTCCTCCAGAGCTTCTTGGCATCAAAGAAATGTTGTAGAGATAAAAGAGTTAGAGCTATTATTCTCTAAACATCATGTTTCCTgctgaaattatgaaaaagATGATGGGTGAATCAAATGATTAACAAATCAGAATAATTATCAGCgatagtttttgtgtgtgtgatcatcCCGGGCAGTCTGTGTGCAGCGAATGATTGTGTCCAAATCCAAGCTGTAATGTTATTGCTGAATCATTTCACTGATTGTGATTACAGTAATAATGGTTAATAAAGGAGTCTTCACTTCACATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039823390.1 True 3623 mRNA 0.53 13 22581320 22605991

Neighbor

gene id symbol gene type direction distance location
LOC120573633 NA coding downstream 1049 22573551 ~ 22580271 (-)
LOC120573632 NA coding downstream 8174 22570796 ~ 22573146 (-)
usp12b usp12,LOC107707922,LOC103480258,LOC103363176 coding downstream 30345 22526589 ~ 22550975 (-)
phka1a phka1 coding downstream 381271 22164235 ~ 22200049 (-)
clcn5b clcn5 coding downstream 541755 22000595 ~ 22039565 (-)
dachb dach2,LOC103363055,LOC103389227 coding upstream 270699 22876690 ~ 22978132 (-)
stk26 NA coding upstream 421413 23027404 ~ 23057243 (-)
LOC120573388 NA coding upstream 472472 23078463 ~ 23094503 (-)
LOC120573305 NA coding upstream 491622 23097613 ~ 23110241 (-)
LOC120573308 NA coding upstream 506924 23112915 ~ 23115588 (-)
G145395 NA non-coding downstream 109495 22464549 ~ 22471825 (-)
LOC120572729 NA non-coding downstream 320383 22260461 ~ 22260937 (-)
G145345 NA non-coding downstream 324042 22232334 ~ 22257278 (-)
G145343 NA non-coding downstream 350006 22231072 ~ 22231314 (-)
G145337 NA non-coding downstream 379377 22201581 ~ 22201943 (-)
LOC120573387 NA non-coding upstream 1649 22607640 ~ 22608359 (-)
LOC120573226 NA non-coding upstream 138957 22744948 ~ 22746278 (-)
G145508 NA non-coding upstream 208579 22814570 ~ 22814816 (-)
G145510 NA non-coding upstream 211690 22817681 ~ 22818189 (-)
G145514 NA non-coding upstream 231177 22837168 ~ 22839383 (-)
G145342 NA other downstream 350818 22230059 ~ 22230502 (-)
shroom4 shroom4,LOC107741461,LOC107562256,LOC107691917 other downstream 454839 22045501 ~ 22126481 (-)
ccnb3 ccnb3 other downstream 601894 21881290 ~ 21979426 (-)
si:dkey-172j4.3 LOC102306481,LOC103363024,LOC100708735,LOC101468909,LOC102781820,LOC101073787,LOC108246481,LOC106609052 other downstream 1142864 21351242 ~ 21438456 (-)
G145509 trpc5,LOC103389248 other upstream 208915 22814906 ~ 22817623 (-)
LOC120572139 NA other upstream 1243679 23849670 ~ 23855268 (-)
LOC120572715 NA other upstream 1449009 24055000 ~ 24075036 (-)
LOC120572219 NA other upstream 1526235 24132226 ~ 24140420 (-)
LOC120573113 NA other upstream 1627650 24233641 ~ 24363065 (-)

Expression


Co-expression Network