LOC120573587


Basic Information

Item Value
gene id LOC120573587
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 135443 ~ 138237 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039823396.1
ACTTTCTGCATCCTAAACGAACGAGAAGTTGAGAATGGCGAAAATTAGCAAGTCAAGAAGATATACCCTCCAAGAGGCAGTGGAAGAGTGTACTCGGCCACGTGAAAGCGACGAGTCAGAGGaggaaatgtctgagaaagacaGTGAAATGTCTTGCATCGACTCCGTGGCAGAGGACATGTTTTTACAGGGAGGAGACATTACTCTCGACAAGAAATGTGATGTAGATATGGATTGGGAGCCAGCTACATCTGCACCAGTGAGCAAGTGGCCACATGGATTGGAGCAGCAGGACAGTTCATCAGGTGAGGAGCTTCCTTTTCCACAGAACAGCAGGAGACCAAGAGGTAGAGGACAAGGTAGTGGAAAAGGGAGAGGCGTAGAGCAGCAGGACAGTTCATCAGGTGAGGAGCCTCATCTTCCAACTCCCCAGAACAGCAGGAGACAAAGAGGTAGAGGACGAGGAAAAGGGAGAGGCTGCAGTCAAGCCAGATCAACCAGCCCATCTGAAGAGAGGTGGAATGATGTTGACGTTCCAGACATCACACCACCACAGCCCACCTTCAGACCCAGAAATGTCCCAGGACCCCAGCTCATACGTACTGCTACGTACACAGCCCTCCAGTTGTTTCAACTATTTTTTACCAACTCTGTTTTGAAGACAATACTTCAAAACACCAACAACTGTGGATCAACACACCATTCAACACCCTCTATCCCGTGGATTGATCTGACATTGCAGGACATGTTTGCATTCATGTCTTTAGTTGTTTACATGGGTGTAGTCAAATGCTTTTCTTTCACTGATTACTGGCGTGGGGGTCATCTTTATAGCTTGCCGTTCCCGAGACGGGTAATGACTGGTAAAAAGTTCCTCAGGATCTCCCAGTCCCTTCACCTCAGCAGCTCTGTGGGGGATGCTGCTAATGATGAAAGGAGAGGCACAGGAGCCTACGACCGCCTGGGTAAGATAAAGCCGCTCTACGAGGAGATGAGGGACTCCTGTAGAAGAAACTATCACCCTGGCCAGGAAATCGCCATTGATGAGCGAATGGTTGCTTCAAAAGCCCGCACTGGTCTGAAACAATACATGAAAAACAAGCCTGTTCGCTGGGGTTATAAACTCTTTGTTCTGGCAGACTCCAGGAACGGTTATACATGGGACTTTTTTGTTTATGAGGGAAAGTGTCAGGGAAACAGTGGTAAGGGACTCAGTTATGAGGCAGTGATGGAGCTAATTGATGTACAGTTGCTGGGCACTGGCTATAAGGTCTTTGTGGACAATTTTTATACAAGTCCAATCCTGTTTCGTGACCTCCTTCTTAAGAGGATCTGGGCATGCGGAACCATCCGCACAAACAGAATCGGATTCccaaggtcaaaggtcaacattCTGGTCTCAAAATCTCCCCGTGGCAGCATACGCTGGATCAGGAATGGCTCCTTGCTCTTTGTTCAGTGGCGAGACACAAGGGATGTTTTTCTGTGCTCAACTCTCCACAGGGCCCACGCAGAGGACACAGTGCAGAGGAGGATCAAAGGTGCAGATGGGCAGTGGCAGCTGAAGGACGTCTCAGTTCCACCAGTGGTGAAGGACTACAACCGGTGCATGGGTGGAGTGGACCACTCAGATGCCCTCATAGGGTATTACAAAGTCCTGCAAAAGACCCAACGGTGGTACAAGACTCTGTTTTACCACTTCATGGACATCGCAATTGTGAACGCCTTCCTCCTCCAGAAGGACCTTGCAATTGGCAAAGGAGAGGTACCTCTGCATCAGAAGGCATTCAGAGAGACGCTTGCAGTGGAGCTGGCAGAGGCGGGGTCTTCCTCCACAGCCACACCCGAACCACCTCCTGCTCCACGTGGAGCACATCACAGGCCAGTGTATATCAGTGGGCACAGCACTGCTGGTCGGCTTAAGTGCAGGCAGTGTCATGCAAAGACACCAGTGAAGTGCTCCACCTGCGATATTCCTTTGTGTTTTGTCGCTGGCCGTGACTGTTATAATGACTGGCATGTTGCCAGTAACCTGTAATTGTAAATACTAGTACAGTggctgttgaaaatgtgcctgcagcacatatctgcgttcatcaaccaccagatgcggaccgtgtgtgtctgtgtgcgcgcaaagagagaaggagagattgTGCTGTCTTATGTCATATGATCATTAACTAATTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039823396.1 True 2192 mRNA 0.49 3 135443 138237

Neighbor

gene id symbol gene type direction distance location
LOC120573590 NA coding upstream 462397 600634 ~ 606718 (-)
LOC120573525 mrps28 coding upstream 768308 906545 ~ 913680 (-)
sorcs2 sorcs2 coding upstream 880021 1018258 ~ 1429717 (-)
LOC120573289 NA coding upstream 1354037 1492274 ~ 1500316 (-)
slc1a1 slc1a1 coding upstream 1412291 1550528 ~ 1574124 (-)
G140202 NA non-coding downstream 91238 44004 ~ 44205 (-)
G140233 NA non-coding upstream 28721 166958 ~ 167223 (-)
G140234 NA non-coding upstream 30712 168949 ~ 169161 (-)
G140236 NA non-coding upstream 32335 170572 ~ 171003 (-)
G140237 NA non-coding upstream 32937 171174 ~ 171380 (-)
G140238 NA non-coding upstream 33222 171459 ~ 171668 (-)
G140274 NA other upstream 305313 443550 ~ 451670 (-)
tada2b tada2b other upstream 1344552 1482789 ~ 1488426 (-)
tspan5a LOC100711712,LOC102299272,LOC102195201,LOC105938388,LOC103480072 other upstream 1485022 1623259 ~ 1649432 (-)
LOC120573528 NA other upstream 1788895 1927132 ~ 2032506 (-)
G140615 NA other upstream 1913244 2051481 ~ 2058191 (-)

Expression


Co-expression Network