vgf


Basic Information

Item Value
gene id vgf
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 5959440 ~ 5967428 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039823409.1
GACATCAGAGCTGACAGGCGGCAACGGAATCCCGGGAGAGGAgcgcgaaaaaaaaaaattcagcgacaaaaacaacaacaacaagtgaCGACACTTAGGCGAACATTAGACACCAACTCACACACAGcaaccaaaacaacaaaaacaagaagaagaagaagaagaagaagaagaagcacgGTGCAGGCAGTGGGCTCTGTGCATGACACTTTCAGCCGCTTTGAGTGTGACGTGTCGAGGCAGGGGAAGCTGGAATCCCCCCCCCTGCTGCTCACTCTGCAACTGCAAGCATTTCTGATTGCCCTCGCTGCTCAGAGCCGACCCTGTTCTGAGTGACCATGATTGGGTACCACGATGCCTCAAGTGCCCTTACCCTCCTAGTCCTCCTGATGGGGGCGTCCCTCCTCCATCCGTCTACCCCCAACCCCATCAACACCCCTGGAGATGTCAATTACCCACACAGAGATACTCCTCCTGCAAAGGATCCAGAGACAGGATCAATACAGAAAGAAGAggcagaggaagaagaggagctcTTTAAGGATGTGGATCCCAAAACACTAGCGGCAGTTTTACTTGAGGCACTGAATCACTCATGGGTaggggaaaggagggagggaagggagCGTGACGATgggatggaggatggagaagAAATGAAGGCTGAGACGGGGGAGCCTACAAGAGAAGAAGCTTACAGAGGAGTGAGAACGATGGAGACGGAGGGagcaaacagagacagagatggcCGACAGGAGCTGGAGCTGCTAATGGGGAAGGAGcgggaaagagaggaggaagaggagaggaagagagctcaggaggaagaggagaagatgaCAGAAAAGGTGACCAGTCGTACCACGAGTCAGACAGTCCAGGTCCAAAGAGAGCAGCCCGCTAGTTTAGACGAAAGAGGGGAGAATGGGCAGGGCGCCGCCCCCCCAAACATCCCCGGACAAGGTAGcaatgaggaggaggagcagctcAGCCCCGAGGAGCTGAGGAACCTCGAGACCATGATGAAGGAGTTCCCTCGTTTAAACGCCGCCACTAAGAGGGACGGCGATTCGGAGCGAAACCAGAGAGAGAGCCGAGGCTACAGCAGCTACAACGACATCATGCCGATCGGCAAAGGCGCCGACCTCGCCATGACTAAGAAGAAACTGAAATGGCAAGAGGAGACGCAGAAAGGCCTGAGCTTCCCAACATTCAGGGGAGGCAACTTCATGGACGACTTTGATCAAAACGACAACTACGCCGGCGGTAACGCAGTGCAGTCCCCGCTTCCGGCAGAGCAGGACGCGATGGAAGACGACGAACCCgcggaagaggaggaagaggaagacgaGGAGGCGTTGAGTcccgaggaagaggaggctcaGGCTAAAGCGGAGCAGGAGGAGATGAGGAGGCAGGCGGCCGAGGCACAGAGAGccaagatggaggaggagaagttGGCCGACATCGCCTCGGACATGCTGCTGCGCTACATGGTCAAACAGAACAACGGGAACAGGAAGTACAGCGCGCCTCTGTCCAACGCCGCCGAGGACAAGCGCTCCGACGAGGAACAGGAAGTGATGGAGGAGGACGATATTGACCCCCAGACCATCGACAAGCTGATTGAGATCTCCAACAAGCTCCACCTCCCCGCTGACGACGTGGTGGACATCATCAGCGAcgtggagaagaagaagaagaaagacgtGCTGCCCGAGGCGGGGTCTCGTTGGCAGCGGCCTCCGACGCCGCTGTCGTCTCCTTTCGCGTCAACCAACGGCTTCTCGGCGTCGCAGATTCCAACTGGTCAAAACGGCTTCCCCGTCTCTAAGCAACCCTCCCCAGCTGTCAATCTCCTCAAAACATGGTTGCAGGAGAAATCGCAAACCAAATCGCCGGATCTTTGGAACAAACCGTCCAAGCCTCTGTCAGCCAGTCCAAATCATTGGCCCAAACCTCAGAAGCCTCTGTCAATCAAGCAGGACCTCTGGCTCAAATCCCCCAAGTCTGTTTGGACCGGATACCCTTTGTACCCCTACAAGTACCCATCCTACTACCAGAGGAAGCTGTACCCGGACTACTACCCCATCTATTATCCTCCTCCCCCCAGACCCAAACCCCGTTACTACATCCCCAAACCCGCTCTCGCCCTCAACAACTTCCTGGGAAATTCCGTGGATGACACCTACTCCTTCCCTCCCAGGCGCCGTTACCACAGCTGGGTCCAACCTCGGCTGAGGCGTCCCCCCGCCGGCCTCCAGCGGAGGCCGTACTACGCCAGCTACCGCTTTCAGCCGCTGCCCATCCCCAAACCTCGTTCCCCTCCCCGAATGCCTGCGATCACTCCGCGACAGAAGTTCTATTACCCAGCCCCAGCGGCACCCGCGGTGACGAGAAATGAAGATTACAACGTGGCTGGAAAGCAGCCGGACAGCAGCAAGCATGACGATCTGGAGAAATACATTCAGCAGATACTCATGAAGGGACAGATGTTGGAGTGAAATGGGAAAGAGGAGAGTGAGAATAGGGGAATTGGAAAGTAGGAGAAATGAGCAGAAAAGTATTTCTTCATTGAATTTGTTTTGCTGGtatttggttttgtttcatGTAACAAGTTTCGTCCTCCCGTTTTGATTGGTTGTGACGTGGACACGGACATTCAGGAGgacttttttttccagctgTAGTCTGGATAAAATGGACTACGGTAGGAAAATGAAAGGAAAGACACACCTCTACACTCCTCCTCTGTGAAGGAGGGGAAACAGGATGAATGGCGTCCGTTGGAAAGCATGATGCGGCAACGTTTTGTTTCATGCTAGAACTTTTCATCCAAACTTCCGGCATGACAACATTCTCCATTGGGACATTTGACAATGCCAACAAAGGAGGACACTTGAATATGTTGTTACCTGTACctttaaacaaatatatttttcagAGTCAGAAAGTCGGATCAATTGTAGGCAGTGATGGATGCTGGGAAATGTTTGATGAATGATGGCATTTGGCTGTCTAAACGCAAAGAGAATTTTGTGTAATTATCCCAGGAAGGGaaattttaaaactttttcatgAACAATCTTTCTGAAATGACCTCCACTAAATGGCCCAAACTATGTGGACGCCAAACATTCCAGCCATATGTGATTCAGACACAAGAGCATTAGTGACGGTCCAACACTGATAATGTATGATTAGGTCTGGCTTAAAGTCGGTGGTTCAGTTCATCCCTAAGGTAATgctcagcgctgtggagtaaggtctgtctacaccacacatacattccaggataggagggaaaaaaaacgctatgggtttgtttgcatttctttaaaccaatcacaatcttcttgggcggtgctaagttctgctaaatagtcttgagaaggaacttgttttggtggaacatttgcacccagaTAAAAGAACAtgccacataaaatattaaattaactgttcacacaatacggTAACACACAGAGAGGTAAAGCGGAGGGATGAAATGTACTTCCGTGGATCCAGACTATTCCACACCTGACTTTGGGACATTGTTATGTTCAAAACAGGAAAGGGCCAAAAACAAACTGTTGACGGGAAGCGGGAATCTCACTGTTATCTAGAATATCATTGTATCCTAGAGCTTTAATATTTCCCTTCTTTGGCACTAAGGTGCATTGCCCAAACGAGGAAAACCTCCCCAGACCACAGAGCGTCTCTATACTTTTGGCCATATAGTGTATCAACTGACACATCTGTCATCTCTTACTGATGAAATCAAAATCACACATCATCTTGGAATGGCCTCATGCCATTGAATACATTTGTATGCAAATGTATCATTTTTGTgttatttgtataaaaatgcAGCAAAAGCATTTCAGCAGAACAGCACCTTCTCGTTATGTATACTCACACATAGCCACCAAAGCTCTTTATGATGAAATATAAGGCTCCGAAAAGCATATTTCATACAAAGGGCTGTGGAAGCCACACTAACACCACTGTAATGGCTTGGATGACTCATCCTTTTGCATAACTTCAATTACCTTGTTGCTATGGTGCCAAACCCTGGCCAAACTCTATATGGCATTCTTTTGATGCCTTCAGAGGAGAATGCAGTGTTGGAGGCATACTGCTCTTTTACTGAACACATGCAttttaaaggataaggctggtgTTATTCTCTATTTTAATCTACATCACCAAATGTGTTTAATACTTTGCGACTTCCCTACCCTGTCTGTAGTACTCAGTTTATATTTGTGATATAGAAAATTACCAACCTTACCCTTTAAAGATACCCTCCATGGTTTCGTTATAGCACAAAGTGCCCCTGAATCCCAAAGTTCCTTTCAGCTCGATAAAGACCATTAAGTGCCATTTTAGTATTCAACATTTAGTTTTCATTTGATCATTATGAACTCAAAGTCTATTTTGAGACAtacattgtttttcttgttATCTAAATTGTTGCACAACCATGGATCATACATTTTAAACTCTGAGCTGAAATCGGCTGCCTTACATGTCACTGTGACATCCCTAACATTGCGCTTTatgatttttgaaaaaattattattattttgataccATTTGATATTATCCATGAGATCAAGGCTGTAATCACTTTTGTAAGCGATAATGGGAATGATTCTCTGGAACTGATTCCACTGGAGATGGGATCAGTTCGCTCATATTCAGGTAAAACTAAGTTGAATTCgcaattttaaaaacaaaattaaggGATTTTTAATTGCTTGGATTGGATGgcagtgggtttttttttgtactgctGAGATTTCCTCTCTTTACTTAGATGGCTACTGATAATCAGTGATCAATAAACACTTCCTTTTCTCCCCATTCACCTCTTTTGAAAATGCGTCACTTGGAACAAGAGCAGAAGTCTCTCTTTGGTTTATCTGTATTGTTGACCTTTGTTGTCATCTGTTGCTAAGGGATGAGCAAATCTCAACATCTTTGTTGCCAAGCCAAAATAGGACCACGGCATCGCCAATCTCACACTGAAACCACGAGGCCAAAAGAGAGTGAACTGAATCGAGGAGACGGGAGTGAAAACAAAGCTTTTTGTAATTGTTAATGattcgttgttgttttttttacacgaTTAAGAAGAAAGTTGCAGATTGAGAAAGGAACCGGGAGAAATAAGGGGGCTGAGCTATGAAGCGACAGACCAGCGGGTAAAAGTGTCTGCACGTTTATGTATACTTGCATCTAAAAATTGCTTCTTTGAAGATGTACAAGCATCAATTAAaagagcataaaaaaaaaacatttaaagatgaCAGAAACAATGACGTCGTTGTACCTTAAAAATCATTGTTTGAGTCATGTATGCAGCGAGTGTTGTCTATGGTCATTCTAGATGTACCTTGTTGTAACCATCGTAATAAACATGCGTTTGCTGGATGTAAATATGCGCATGTCAATGGCTACTTTTGCTACACATGAAGAAACAATAAAGTCAActatttttattacaaaaatg

Function

NR:

description
PREDICTED: myb-like protein X

GO: NA

KEGG:

id description
ko05033 Nicotine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039823409.1 True 5519 mRNA 0.47 2 5959440 5967428

Neighbor

gene id symbol gene type direction distance location
trnal-aag_6 NA coding downstream 2308 5957051 ~ 5957132 (-)
snapc2 NA coding downstream 4380 5946032 ~ 5955060 (-)
LOC120573619 NA coding downstream 37569 5901924 ~ 5921871 (-)
LOC120573667 NA coding downstream 93690 5841417 ~ 5865750 (-)
ache ache coding downstream 137661 5784808 ~ 5821779 (-)
serpine1 serpine1 coding upstream 30690 5998118 ~ 6005218 (-)
trnas-uga_22 NA coding upstream 61413 6028841 ~ 6028922 (-)
trappc14 LOC104941436 coding upstream 191430 6158858 ~ 6185624 (-)
tm4sf21b NA coding upstream 270145 6237573 ~ 6243669 (-)
eif4a1a LOC107098142,LOC103365478,LOC100693841,LOC103148870,LOC102238331,LOC101477102 coding upstream 364260 6331688 ~ 6340737 (-)
G141416 NA non-coding downstream 247724 5711434 ~ 5711716 (-)
G141394 NA non-coding downstream 374914 5584162 ~ 5584526 (-)
G141259 NA non-coding downstream 750980 5208237 ~ 5208460 (-)
G141233 LOC104947167 non-coding downstream 881224 5077628 ~ 5078216 (-)
G141224 NA non-coding downstream 923243 5035502 ~ 5036197 (-)
G141467 NA non-coding upstream 2523 5969951 ~ 5970613 (-)
G141468 NA non-coding upstream 3507 5970935 ~ 5971387 (-)
G141470 NA non-coding upstream 22467 5989895 ~ 5992227 (-)
G141601 NA non-coding upstream 188624 6156052 ~ 6157413 (-)
G141612 NA non-coding upstream 298012 6265440 ~ 6266025 (-)
G141439 NA other downstream 116294 5743559 ~ 5843146 (-)
G141400 NA other downstream 358978 5596958 ~ 5600462 (-)
cd99l2 cd99l2 other downstream 376445 5560026 ~ 5582995 (-)
nat16 nat16 other downstream 484285 5424561 ~ 5475155 (-)
G141234 NA other downstream 859358 5099705 ~ 5100082 (-)
gal3st4 gal3st4,LOC104939968 other upstream 210493 6177921 ~ 6220260 (-)
LOC120572220 NA other upstream 254543 6221971 ~ 6231297 (-)
sox19b LOC104926817,LOC103365479,LOC100693580,LOC102199731,LOC101477749,LOC104962535 other upstream 341470 6308898 ~ 6315817 (-)
LOC120572256 NA other upstream 386036 6353464 ~ 6371100 (-)
tbc1d14 tbc1d14 other upstream 408544 6375972 ~ 6416457 (-)

Expression


Co-expression Network