LOC120573633


Basic Information

Item Value
gene id LOC120573633
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 22573551 ~ 22580271 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039823472.1
ATTCAAATGGAGAGATGCAACAGTGGAGACAGAAACGTGAAGACAgtaaagaattgatttcaagaTAAAGAGGAAGATACAGAAAGTGATCCACAATCAGCCGGTTGAGAGATAAAGAGACATGAACACAACCTGACAAGAAAGAAACAGCCTCATTCTCTAAAACATTTGACACATTTGATAAATCCAACTTTAATCAACTCAGTGTAAAAATATTGACACATCTTTTCATCCAGGGACTAAAAAATACTATAGTAATGTTTGTTGTGCTGGAGGTTACATCATGTTGAAAACTGGTGGTTACCGGCCTGGTCCAACCAttcactttcactttcactttgaGCAAGGTGAGGTGAACCGATTGAGGGCAGGTAAGCCTCAGTCTGCTGATAAATCAATACTACTTCAGGAGACATAAAACGGATCGCTGCTCTTCTTCAAACACCTCAGTATCTGATTGTGATGCAGCCAGAAAGTAGTTCAGCAGGAAATCTGCGTCCTCACTTTCTCGTCCTCGTTCATCCACTTGTGGAGGGGTTCATTGGTCCTGGGTACAGCTGACAAATACCTACCAACACATATGAACAGGGAGAAGATGATCTGCAGCAACCTGCTGCTCTTCATCCTGACCTCCTGTATCTCTGGAACATTTGTAGTGAATGTGACACAGACCTCCTATCAAGCAGAGGAGAACCACAATGTCACACTGGAGTGGACGTTCACAGCCCAAACTGACAGGCCCATCAACTCTTTTATCATCTTCTGTGAGCTGTTTACCGATCTCAAAGTCTCCGTCCTGTTTCTACTACGTGAAGGTGTCGAGGTCCCAGAGTCTCAGGATGAACAGTTTGCAGGACGAGTCCAGTGGGACAAAGACGTCCTCAGAGGAGGACGACTCAGATTCCACATGTCCAGGCTCAGGACTGAGGACTCGGGCCGTTACGTGTGTCAAGTGATCACAAATTATATTGCCACCTTCTTTAAATGCCGCCTCAATGTCACTGCAGCGAGGGATCGGCCCAAACCTGATCTGTCTCCAACAGCAAGTCCACTACAGCCAGAGAAGGGGGGAAGGATCAACATCTGGAGTGGACTGATTCTGACAGCAGGGTTAGCTAGTGTGATGATCGCTTTTTACTTGTTATTTCATCACTCTCCTTGCAAACAGGAGTTCAGTCCAGTTTGATAGTGTCACATTTTATACCAtggacacagaaaaaaatagtttCTCATTGGCTggcagtttataaaaaaaactttgtatcaggacatataaaacataacagcaggtaaccatagcaacaatTGTGATGCTTCACACATGTGACATCAGCAAAATGACCACAACCAAACTGTTAAAGTTGATTGAATGATTGAAACACATTCATGGAATAAGAGTCAGGCTGCGTCCCAAATTCCatactaacattttatttagtagCTAAAACAATATGTGAGACTTTTTAGTATGTCCGAAACCTTAGTATACACCAATAGTGCGTGAATTGCATACTCTTTCTGGTAAAATATTACATTATGCAATACTGGACACTACGCtggcataaatatcccacaattCAATGCGGTAGTAACGACAACGTTcataacagacaaacagacagaaaccaAGGAGCTCTGTAACGTCAATAACGCTCTAATTTACATTTCTACTTATTTAAACCACTGCTGGTCTAGTTATTCTAGTTCTAGTTATTCCCCTTTCAGTAATTTAAGAATTATCTGGCGATGCCACTAGAACAGTTTCCATGGTTACGCGTCTCCAACGGCATGTAGGCGCTCAGGAAGTGACGTTGAATATTACAGCTTAGTGCGTCCAAAAAGATccacactactgtttatttacaccaAAGTATGTTGAACGATAGTATACATGTTAAGTATGTAGTGCAGAGTATGCGATTTCGGACCAAACCTCATAGTACTCAACGGATAGACAAACATAATATGGAGGAAACAATGCTCTATATGATTGGACGTCTCATCACTTATTAGACAGATCTGAAGACTGCACTATATTCACTTTATCTAAATATCTGCCTTGTACAGTTTGTAAAGCTAATCTTAAACATTTATCTGTTGCATTTAAAGCTCTGAGactttttataatatatatactgtatatatatatatatatatatatatatatacacatatagaaAAAACTTAAGGCCATATTGTCCTTACTGGTTTCCCATCATACTTCCATACTTTGGCCAGtataatgcttgctcttggggggaattgttgggtttcTGTAAATTATGATGTGGTTTTAGACCTACtctttctgtaaagtgtcctgagataacttctgttatgatttgatactatcaatttaattgaattaatcaTTAAAAAGATtacaaaagtacattttgtgTGGTATTAAAACAATCTAACAAAAACTCTTATATTGAATGAAGAAACCCTGTACAAGCTACTGCAGTCTACTTGTATTTATTACAATATACTGAAATTGTTAACTATACACATTCTATATTACCCACTGACTTTGAGTTCTGAGGAAAAATACAAGTAGATATTAGCAATTAATTAAAAACAGTGATTTTATGCTGGATCATACTGATGTCATGAACTGACAAGAATGAGGAAATAAAATGAGAGATGCTTCtcttttaaaggtgctgtaggtaagattgcgaagatccaggacttagccaaaaaatttgtcgcactacaggctgttggtggtgccagaggagccaggtttatttttaattacctgcttcatgtagttctactggaacatagggtcagtttcagcaaatataacagaaagttagttttataaggcttacctattgcacctttaactgtATCATCTCTTAACATATTTAGTCGGATTACTCCATCATACACAATCTGAGTTCCCCAAACATAGAGGCCACCTGACTACATCTGAAGCAGGGAGGTTAAATCAAACACTCCTGCGTGGGTAGGAACTGCCCCCTTCAGGTGCAATCAATCACAACATTACAGGCTATATATCTACAGACTTCCTCCCTTTGGGCACTTTCTTCTACCCCAaacatgatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctcctatAAGTTGATTTACTTCAGTGCTGTTTTATTTGTCGTTAACACACACAACTTATGTTCATGTTTGAGTCATTGTTAACGAATTCTGTTTTAAACCACACACATTCAATCCTTCTTTAAATAAATGCTCTGCTTTAACTGCC
>XM_039823473.1
ACAATTAGCCACGTGCCATTTTATTCAAATGGAGAGATGCAACAGTGGAGACAGAAACGTGAAGACAgtaaagaattgatttcaagaTAAAGAGGAAGATACAGAAAGTGATCCACAATCAGCCGGTTGAGAGATAAAGAGACATGAACACAACCTGACAAGAAAGAAACAGCCTCATTCTCTAAAACATTTGACACATTTGATAAATCCAACTTTAATCAACTCAGTGTAAAAATATTGACACATCTTTTCATCCAGGGACTAAAAAATACTATAGTAATGTTTGTTGTGCTGGAGGTTACATCATGTTGAAAACTGGTGGTTACCGGCCTGGTCCAACCAttcactttcactttcactttgaGCAAGGTGAGGTGAACCGATTGAGGGCAGGTAAGCCTCAGTCTGCTGATAAATCAATACTACTTCAGGAGACATAAAACGGATCGCTGCTCTTCTTCAAACACCTCAGTATCTGATTGTGATGCAGCCAGAAAGTAGTTCAGCAGGAAATCTGCGTCCTCACTTTCTCGTCCTCGTTCATCCACTTGTGGAGGGGTTCATTGGTCCTGGGTACAGCTGACAAATACCTACCAACACATATGAACAGGGAGAAGATGATCTGCAGCAACCTGCTGCTCTTCATCCTGACCTCCTGTATCTCTGGAACATTTGTAGTGAATGTGACACAGACCTCCTATCAAGCAGAGGAGAACCACAATGTCACACTGGAGTGGACGTTCACAGCCCAAACTGACAGGCCCATCAACTCTTTTATCATCTTCTGTGAGCTGTTTACCGATCTCAAAGTCTCCGTCCTGTTTCTACTACGTGAAGGTGTCGAGGTCCCAGAGTCTCAGGATGAACAGTTTGCAGGACGAGTCCAGTGGGACAAAGACGTCCTCAGAGGAGGACGACTCAGATTCCACATGTCCAGGCTCAGGACTGAGGACTCGGGCCGTTACGTGTGTCAAGTGATCACAAATTATATTGCCACCTTCTTTAAATGCCGCCTCAATGTCACTGCGAGGGATCGGCCCAAACCTGATCTGTCTCCAACAGCAAGTCCACTACAGCCAGAGAAGGGGGGAAGGATCAACATCTGGAGTGGACTGATTCTGACAGCAGGGTTAGCTAGTGTGATGATCGCTTTTTACTTGTTATTTCATCACTCTCCTTGCAAACAGGAGTTCAGTCCAGTTTGATAGTGTCACATTTTATACCAtggacacagaaaaaaatagtttCTCATTGGCTggcagtttataaaaaaaactttgtatcaggacatataaaacataacagcaggtaaccatagcaacaatTGTGATGCTTCACACATGTGACATCAGCAAAATGACCACAACCAAACTGTTAAAGTTGATTGAATGATTGAAACACATTCATGGAATAAGAGTCAGGCTGCGTCCCAAATTCCatactaacattttatttagtagCTAAAACAATATGTGAGACTTTTTAGTATGTCCGAAACCTTAGTATACACCAATAGTGCGTGAATTGCATACTCTTTCTGGTAAAATATTACATTATGCAATACTGGACACTACGCtggcataaatatcccacaattCAATGCGGTAGTAACGACAACGTTcataacagacaaacagacagaaaccaAGGAGCTCTGTAACGTCAATAACGCTCTAATTTACATTTCTACTTATTTAAACCACTGCTGGTCTAGTTATTCTAGTTCTAGTTATTCCCCTTTCAGTAATTTAAGAATTATCTGGCGATGCCACTAGAACAGTTTCCATGGTTACGCGTCTCCAACGGCATGTAGGCGCTCAGGAAGTGACGTTGAATATTACAGCTTAGTGCGTCCAAAAAGATccacactactgtttatttacaccaAAGTATGTTGAACGATAGTATACATGTTAAGTATGTAGTGCAGAGTATGCGATTTCGGACCAAACCTCATAGTACTCAACGGATAGACAAACATAATATGGAGGAAACAATGCTCTATATGATTGGACGTCTCATCACTTATTAGACAGATCTGAAGACTGCACTATATTCACTTTATCTAAATATCTGCCTTGTACAGTTTGTAAAGCTAATCTTAAACATTTATCTGTTGCATTTAAAGCTCTGAGactttttataatatatatactgtatatatatatatatatatatatatatatacacatatagaaAAAACTTAAGGCCATATTGTCCTTACTGGTTTCCCATCATACTTCCATACTTTGGCCAGtataatgcttgctcttggggggaattgttgggtttcTGTAAATTATGATGTGGTTTTAGACCTACtctttctgtaaagtgtcctgagataacttctgttatgatttgatactatcaatttaattgaattaatcaTTAAAAAGATtacaaaagtacattttgtgTGGTATTAAAACAATCTAACAAAAACTCTTATATTGAATGAAGAAACCCTGTACAAGCTACTGCAGTCTACTTGTATTTATTACAATATACTGAAATTGTTAACTATACACATTCTATATTACCCACTGACTTTGAGTTCTGAGGAAAAATACAAGTAGATATTAGCAATTAATTAAAAACAGTGATTTTATGCTGGATCATACTGATGTCATGAACTGACAAGAATGAGGAAATAAAATGAGAGATGCTTCtcttttaaaggtgctgtaggtaagattgcgaagatccaggacttagccaaaaaatttgtcgcactacaggctgttggtggtgccagaggagccaggtttatttttaattacctgcttcatgtagttctactggaacatagggtcagtttcagcaaatataacagaaagttagttttataaggcttacctattgcacctttaactgtATCATCTCTTAACATATTTAGTCGGATTACTCCATCATACACAATCTGAGTTCCCCAAACATAGAGGCCACCTGACTACATCTGAAGCAGGGAGGTTAAATCAAACACTCCTGCGTGGGTAGGAACTGCCCCCTTCAGGTGCAATCAATCACAACATTACAGGCTATATATCTACAGACTTCCTCCCTTTGGGCACTTTCTTCTACCCCAaacatgatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctcctatAAGTTGATTTACTTCAGTGCTGTTTTATTTGTCGTTAACACACACAACTTATGTTCATGTTTGAGTCATTGTTAACGAATTCTGTTTTAAACCACACACATTCAATCCTTCTTTAAATAAATGCTCTGCTTTAACTGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039823472.1 False 3363 mRNA 0.39 5 22573551 22580249
XM_039823473.1 True 3382 mRNA 0.39 5 22573551 22580271

Neighbor

gene id symbol gene type direction distance location
LOC120573632 NA coding downstream 405 22570796 ~ 22573146 (-)
usp12b usp12,LOC107707922,LOC103480258,LOC103363176 coding downstream 22576 22526589 ~ 22550975 (-)
phka1a phka1 coding downstream 373502 22164235 ~ 22200049 (-)
clcn5b clcn5 coding downstream 533986 22000595 ~ 22039565 (-)
htr2cl1 LOC101072775 coding downstream 890199 21537147 ~ 21683352 (-)
LOC120573582 NA coding upstream 1049 22581320 ~ 22605991 (-)
dachb dach2,LOC103363055,LOC103389227 coding upstream 296419 22876690 ~ 22978132 (-)
stk26 NA coding upstream 447133 23027404 ~ 23057243 (-)
LOC120573388 NA coding upstream 498192 23078463 ~ 23094503 (-)
LOC120573305 NA coding upstream 517342 23097613 ~ 23110241 (-)
G145395 NA non-coding downstream 101726 22464549 ~ 22471825 (-)
LOC120572729 NA non-coding downstream 312614 22260461 ~ 22260937 (-)
G145345 NA non-coding downstream 316273 22232334 ~ 22257278 (-)
G145343 NA non-coding downstream 342237 22231072 ~ 22231314 (-)
G145337 NA non-coding downstream 371608 22201581 ~ 22201943 (-)
LOC120573387 NA non-coding upstream 27369 22607640 ~ 22608359 (-)
LOC120573226 NA non-coding upstream 164677 22744948 ~ 22746278 (-)
G145508 NA non-coding upstream 234299 22814570 ~ 22814816 (-)
G145510 NA non-coding upstream 237410 22817681 ~ 22818189 (-)
G145514 NA non-coding upstream 256897 22837168 ~ 22839383 (-)
G145342 NA other downstream 343049 22230059 ~ 22230502 (-)
shroom4 shroom4,LOC107741461,LOC107562256,LOC107691917 other downstream 447070 22045501 ~ 22126481 (-)
ccnb3 ccnb3 other downstream 594125 21881290 ~ 21979426 (-)
si:dkey-172j4.3 LOC102306481,LOC103363024,LOC100708735,LOC101468909,LOC102781820,LOC101073787,LOC108246481,LOC106609052 other downstream 1135095 21351242 ~ 21438456 (-)
G145509 trpc5,LOC103389248 other upstream 234635 22814906 ~ 22817623 (-)
LOC120572139 NA other upstream 1269399 23849670 ~ 23855268 (-)
LOC120572715 NA other upstream 1474729 24055000 ~ 24075036 (-)
LOC120572219 NA other upstream 1551955 24132226 ~ 24140420 (-)
LOC120573113 NA other upstream 1653370 24233641 ~ 24363065 (-)

Expression


Co-expression Network