LOC120573671 (LOC107990212,LOC107990219,LOC107990208)


Basic Information

Item Value
gene id LOC120573671
gene name LOC107990212,LOC107990219,LOC107990208
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 812543 ~ 815209 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039823565.1
CTGGCTACAGCATCAGAACTAGCCACCCCTGACTACCAGTTACCATTTCATCTTGATGTCTCTGGAACAGAATCATGCGTCAATGGCATTCTATCCAGAGAAAAGGGGGTGACAGAGTAGTCTTAATGTACATAAGTGTCAGGCTAGACATCATGGAAAAACGACACCCACAATGCACCCAACATGCCGCGGGTATCGCAAAGCTCATTCAAAAAACAGCACACATTGTCATGGGACACCAACTTCATGTACTAACCACACATAGTGTAGTGGCATATGTAAACTCAGAAACCTTCACACTCACTACCCTAAGACAACAGCGGCTGAGCAAAATTTTGGAAGCACCTAACATTTCATTCACACACGAAGGCATCAACATGGCAGACCAGATAGGACCAGGTGAGCCGCACACATGTGCAGAAAGGGtgataaaagaagaaaaggtcAGAATGGACTTACAGGCTACACCATTAGTAGGAGCCAGAGAGCTGTACACAGACGGCTGTTGCTTCAGACACGAGACAGACGGTCTCAGGGCGGCCTATGCAGTAGTGGAAGAAAAGCAGGGGGTGTGGGTAACACAGAAAGCTGAGAGGTTGGTGGGACCACAGTCAGCCCAGCGAGCAGAAGTGATAGCAGTAATAGAGGCACTAAGGTTAGGGAAAGGACAGGCAGTCAATATCTACTCCGACTCGGCATACGCGGTAGGAGCAGTACACGTAGAGCTAGGCCAGTGGTTGAGAGCAGGATTCCTCACAGCAGGGAACAAACCCATCAAACATGAAACAGAGATGAAAGAACTGGCAGAAGCACTGCTACTCCCAGAAAAAGTGGCAGTAATCAAATGCAAAGGACATGACACAGGAAATAGCAAAGTAGGCCAGGGAAATCAAGCAGCCGATcaagcggcaaaacaagctgcAGGATACCAAAACAACATGACCCTGGTAAATGCGGAGACTGAAACTCAGGTCAGGGTTAACACAGAAAGATTGGTAGACATGCAGGTGAAAGCATCCCCACAAGAAAAAACCATGTGGAAAGCTAGGGGGGCCACCGAGACTGACGGACTATGGAGGGGGCCCGATGGTAGACCCATCCTGCCCCCCGGACTGAGACAGACTGCGATAGAAGAAGCACACGGGGTAGGACATGTGGGGGTAGCACAAATACTACGAAACCTCGAACACTGGTGGCACCCGTATCTCAGAGATATGGCCCAACATTTGACTAAAACATGTCCGCAGTGTACTAAGTTTAATCCCCGACCCACCGTCAGACCAGAGCCAGGAAAGTATCCCTTAGAAACCAAACCAGGTAAGGAAATCATCATAGACTATACGGATATGATAGATTCGGTCAAAGGGTACAGATACATACTGATGTGTGTAGATGCGTACACGGGCTGGCCGGAGGCATGGCCTACAAAAAAGGAGGATGGTATATCAGTAGTAAAGTTCTTGGTAAACCAGTACATACCCAGACACGGGTTCCCTGAAAAAATTAGATCAGACAATGGGACCCATTTCAAAAACCGAGACTTACAGCAGGTGGAAGCAATGCTAGGGTTGAAACACGCATTCGGAACTGTGTACCACCCTCAGTCTCAAGGCAAAGTGGAAAGAATGAACCAGACAGTGAAGGGCAAATTGGCCAAAATCTGTGCACAGACCAAAATGAATTGGGTAGATGCCCTACCCCTAGCCTTAATGTCAGTCAGGTGCTCAGTAAATCACGCTACGGGGTTCACCCCACACGAGCTGCAGACCGGTAGGGCCTTCCCCGGCCCTCATTCTAAGCTGCCTCTGGTTGAAAACACTGACCAGCAACTAACATACAAAGCCTATTTTCACGAACTGCAAGGTCTAGTGTCTTTATTCTCTAAGCAGGTGGAGGATCAGAGAGAAGAGAACAAAAGTACCACCCCCCCAGAGGCAGAGTGGGTACTGCTGAGAGTCATCAAAAGAAAGTGGTCGGAGCCAAGGTGGACTGGGCCATTCCAGGTAAACGAGAGAACAACCCACGCCGTGCGCCTGAGAGGCAAGGGAGACACCTGGTTCCATTGGAGCCAGTGCGCCGCAGCTGAGGAGCCACAACGCTCACTGACTGAGATTCAGAGGGATCTTCAGGAAACCAGCACTGGGTCGGCTGACTCGGACAAAGATCCTGCCAACGTAGGGGCAGAATAATCCCCTGGCAGTGATCAAGGTCCCAGGGTAGTCTACCCCTGGGGTCCGAAGTAAGAAGAGCTCCAGTCGGGAGGAGGTGAAACAGCGCTCCTCTCCTTCATGTAGCGTGCCAAGCTACCAACACCAGGAGCAGgaacattttttcttttcatatatATGTCGCAGATAGCTACAGAGCTGTGTTGATATAGCCAAAATAGGGTTAGAAACTCTCTCAAGGGTGTTACCGCTAGAGATACAAGGAAGACGAGGGTTAATCAACTGAAGGTTTTGCTTGCCTATATCTTTGCAAAATATGTTTATCCCTGTAAAGCCTGACCCATCAAAAAATAGTCAGAAAATTCTAATTTTTTGGAACTGAgatgtttattaaacattttaacaaaatCCCCAACAAATATTTTGCCATATCATTTTGTTTatgatatattttttgtatcaCATTTGATACATTGGGTATTTTGGGCAATTTTTTGCT

Function

NR:

description
PREDICTED: uncharacterized protein LOC107990212

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039823565.1 True 2667 mRNA 0.48 1 812543 815209

Neighbor

gene id symbol gene type direction distance location
LOC120573672 LOC105024657,LOC106023958 coding upstream 18664 790858 ~ 793879 (+)
LOC120573513 NA coding upstream 60888 748644 ~ 751655 (+)
LOC120573607 NA coding upstream 268101 543129 ~ 544442 (+)
LOC120573509 NA coding upstream 497092 314019 ~ 315451 (+)
LOC120573670 NA coding upstream 741877 69341 ~ 70666 (+)
LOC120573524 NA coding downstream 48109 863318 ~ 890296 (+)
grpel1 grpel1,LOC102799061 coding downstream 653155 1468364 ~ 1478441 (+)
ccdc96 NA coding downstream 673275 1488484 ~ 1505654 (+)
trmt10a trmt10a coding downstream 693592 1508801 ~ 1519565 (+)
spata6l NA coding downstream 707787 1522996 ~ 1543886 (+)
LOC120573673 NA non-coding upstream 11389 796708 ~ 801154 (+)
G140313 NA non-coding upstream 65653 746590 ~ 746890 (+)
G140309 NA non-coding upstream 152625 659708 ~ 659918 (+)
G140292 rubcnl non-coding upstream 247666 564301 ~ 564877 (+)
G140286 NA non-coding upstream 308811 503461 ~ 503732 (+)
LOC120572243 NA non-coding downstream 10779 825988 ~ 833455 (+)
G140341 NA non-coding downstream 63891 879100 ~ 879497 (+)
G140343 NA non-coding downstream 65168 880377 ~ 880855 (+)
G140354 NA non-coding downstream 137046 952255 ~ 952469 (+)
G140359 NA non-coding downstream 195958 1011167 ~ 1012178 (+)
LOC120572292 NA other upstream 189508 621116 ~ 623035 (+)
G140263 NA other upstream 476367 335882 ~ 336176 (+)
frem1a frem1,LOC106908230,LOC105925506,LOC101079287,LOC108244244 other downstream 862001 1677210 ~ 1725468 (+)
G140582 NA other downstream 1114414 1929623 ~ 2030627 (+)
G140594 NA other downstream 1207383 2022592 ~ 2032225 (+)
G140613 NA other downstream 1240230 2055439 ~ 2059367 (+)
ablim2 ablim2 other downstream 2012843 2828052 ~ 2954690 (+)

Expression


Co-expression Network