LOC120573672 (LOC105024657,LOC106023958)


Basic Information

Item Value
gene id LOC120573672
gene name LOC105024657,LOC106023958
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 790858 ~ 793879 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039823566.1
ACTCCCTGCACCTGCATTTAACATGAGGAGAGTTACTCAAGGAACGGCAGTCCCTCCTCAACTCCCTCCACCCCCTGCACCAGCCCTCAACATGCGGCGAACAGAGGAGGCCTCTTCAAGCCTGGCCTACAGACCAACATGGCGAGGGGGAAGAATGACCGATACCATTCCCTGCTCTGCGGCTGAGGTCCACATCCTTAGCCTGCTGGAGACAATTAAACAGCAACAAGACCAGCTTGTGGCAAAGGTGAACTACCTCAGCAGCAGGCTGAACAGCACCCCGGGGCCAGATGTTGAAATGCCGGACAATATCCAGTTTCCCCTGGAACAACTGGAGGCAGTGGAggcatttgaaatgtttttaaaggaACCGTCAAATGGCCCAGCTCGACAGAGAGTGATTTCTTCTTTGGCCACCATTGGAGGTCAGGATGTGAAGAGGGTGACCTGGAACATCCTGGCCAGGCTCTTCACAGATGAGGTATCTCATCAGATCAACTGGAAGGGTGTTAATAACAAAAAGTCTTTCAGTAGGATGGCAACGAAGATCTTGCTTTTCAGTGCTGTGAGGAAAAACACAGTGACACGGTCAGCCACGGACGCAGAGGTCACCAAGCACGCAATCAGGTGGTTCAACCTGGCAGCGGATCGGGCAACGAGGAGACGTGTCCCGCCTCAAGCCACACAAACGGAGTAATAGGATAAATAAGCAATAAACTATATTTTTATTGAACTTCTTGTCGTTCACCAGTTAttcattttctgatattttagcTGTGTATTTCATTGAAGTTGTAGCCTAATGGATACATATTTTATGTCTGCACCGACCACCTAGGCCTATAAAGCACTAAATTAGGTTTTGACCacaaaatgaatgtaaagtaGCTTAGCCAACGTAGGATActatcacaaaaacagaataggAAGCTATAACTTATAACTTtccataaatgtaaatgacaATTTTATATTTCCATTGAGTAGTGATTACTTTTGTACAGTAAATTGATGTCTGGACTTGAACCTTTTCTGTTAGGCCTATTGACAATATTGTTAGGTTAAAAATACAAGGCAATGCAGATTTAAGATTAGACCTATATTGCTGTAGTAGCCTATAGACTAGGCCTAGTGATAGTTTTATCCTATGGTTTAGTTTATCCTATTTTTATCCTACAGCAAGAACAGAGGGGATtttgaaaatgagaaaaacgGGTCCAAAACGGACCCGGGCCAGATGAACCAGGAATTTTATGAGTCCATACGGGTCCGCAGCGGATGTGTTTATCAATTTGCGTGTCCCAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC105024657 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039823566.1 True 1305 mRNA 0.45 5 790858 793879

Neighbor

gene id symbol gene type direction distance location
LOC120573513 NA coding upstream 39203 748644 ~ 751655 (+)
LOC120573607 NA coding upstream 246416 543129 ~ 544442 (+)
LOC120573509 NA coding upstream 475407 314019 ~ 315451 (+)
LOC120573670 NA coding upstream 720192 69341 ~ 70666 (+)
LOC120573671 LOC107990212,LOC107990219,LOC107990208 coding downstream 18664 812543 ~ 815209 (+)
LOC120573524 NA coding downstream 69439 863318 ~ 890296 (+)
grpel1 grpel1,LOC102799061 coding downstream 674485 1468364 ~ 1478441 (+)
ccdc96 NA coding downstream 694605 1488484 ~ 1505654 (+)
trmt10a trmt10a coding downstream 714922 1508801 ~ 1519565 (+)
G140313 NA non-coding upstream 43968 746590 ~ 746890 (+)
G140309 NA non-coding upstream 130940 659708 ~ 659918 (+)
G140292 rubcnl non-coding upstream 225981 564301 ~ 564877 (+)
G140286 NA non-coding upstream 287126 503461 ~ 503732 (+)
G140271 NA non-coding upstream 369344 420894 ~ 421514 (+)
LOC120573673 NA non-coding downstream 2829 796708 ~ 801154 (+)
LOC120572243 NA non-coding downstream 32109 825988 ~ 833455 (+)
G140341 NA non-coding downstream 85221 879100 ~ 879497 (+)
G140343 NA non-coding downstream 86498 880377 ~ 880855 (+)
G140354 NA non-coding downstream 158376 952255 ~ 952469 (+)
LOC120572292 NA other upstream 167823 621116 ~ 623035 (+)
G140263 NA other upstream 454682 335882 ~ 336176 (+)
frem1a frem1,LOC106908230,LOC105925506,LOC101079287,LOC108244244 other downstream 883331 1677210 ~ 1725468 (+)
G140582 NA other downstream 1135744 1929623 ~ 2030627 (+)
G140594 NA other downstream 1228713 2022592 ~ 2032225 (+)
G140613 NA other downstream 1261560 2055439 ~ 2059367 (+)
ablim2 ablim2 other downstream 2034173 2828052 ~ 2954690 (+)

Expression


Co-expression Network