LOC120573708 (ddit4l,LOC103390244)


Basic Information

Item Value
gene id LOC120573708
gene name ddit4l,LOC103390244
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 11970407 ~ 11973487 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039823623.1
GCTgcagagtgtatgtgtgtctgagtACGTGGGTCATTCTTGGAGATAAAAcggcgtgtctgtgtgtgtgtacatttatgAGTAAACGTCTAAAACTAAATTAGTTTGCACAAATTCATATTTAAGTCAGCATTGCCTTTAAACTAGAAGAAAACAGCCTGGAGAACTCAAGACTGTCACCATGGTCGCCACAAGCACATTGAAGACTAAAAGCAGCGAATGTATTTCCGAATTGGTTGACCGAAGATATGACCAGGCTTGCATTGAGAAAGAACTGGATTTCTGGGATCACTGTGTGGCTGAACCCCAAAGGAATGCAGATGTCACTGAAGACAGAACCTCTCAACAGTTGGCCAAGATGTTTGAAAACTGCCTGTCACGAGCCAAGAAGACAACGCTGCACTGCTCCTCTGTGCTGGTACCAGAGAAGCTCACAAGGAGAATAGCTCGCGAGGTCCTGCGGCTGGCATCTTGCGAGCCCTGCGGCCTGCGCGGCTGCGTACTCTACATCCACCTTGAGCTGGACAAGGGCTGCAAGCAGCTGGAGCGCATCGTGTACGATGCCACCGTGGTGCCCACATTTGAACTGACTCTTGTTTTCAAGCAAGATGGCACCGCCTGGCCCAGCCTACGGGACTTCCTTTTTATGGGAACCTGCTTTGCCCCGACTTTCAGGCATGTACTTAAACTGAGTCCAGGTTTCCGGCTTGTCAAGAAAAAACTGTACTCCTCCTCGGCTGGTACCGTGGTAGAGGAGTGCTGAACTATGGGAGGGATTAAAGTGGGATATGGGGTTTCCTGTGGGTAAACGCACTTCTGCCCAAATGTAAGTGACACTCCAATGGTGTCATTTTCAACCGTGTTTTTGCACAATACAGTTTTGTCAATTCAACTATTGGTAGCCAGTCAGTTCAGTTTTgaacttcagatgtaaagttaaaaGCTGTTGAATAAATGACCCTTATAGTTCTGGGTTTGGCTTCAGTGTTTCgaagtgcattttttttattggcaaAATTGTACAATTCTGGATGTTTTTTCCTACTCGAAGCATTTGTTGCTCAGACACAATCTtaaattgtacattttaaagaTGAATGTAAAACTATGTTCACAATCAACATGTTTGAGGGACATACTGTGGGTACACGTTAGTTAAAGACACTAGCCACTTTGTTGATGCATCTGTGTTTCCAGATGTGTTCAGCAGCAGTAAACCTACCTGGGCTTGAATAGGAGACTGAAACGTAGTCTATGGGGGGCCATATGTAGCTTGTTGTGGAATGCTGTATTTAGGGCTGTGGATGTTTAAAGACTGAATGTCTTGGGAAGATGCTGCTGTGATGGTGTGGGCTTCTCACACTAAGGGACTTTGGATGCCTTAAATGTAATAGAAATgcacttttatttgttttcactCTGAGCgatgtgtgttttagtgtaaacgttttacatttttataccCCTCCCCCGAACACCTTTTCAATGCAGAGCCTTTGTATATTATTAAAAGGATGGTTCACTAAAATGTAAAAGCttaa
>XM_039823624.1
CAGCTgcagagtgtatgtgtgtctgagtACGTGGGTCATTCTTGGAGATAAAAcggcgtgtctgtTCAGCATTGCCTTTAAACTAGAAGAAAACAGCCTGGAGAACTCAAGACTGTCACCATGGTCGCCACAAGCACATTGAAGACTAAAAGCAGCGAATGTATTTCCGAATTGGTTGACCGAAGATATGACCAGGCTTGCATTGAGAAAGAACTGGATTTCTGGGATCACTGTGTGGCTGAACCCCAAAGGAATGCAGATGTCACTGAAGACAGAACCTCTCAACAGTTGGCCAAGATGTTTGAAAACTGCCTGTCACGAGCCAAGAAGACAACGCTGCACTGCTCCTCTGTGCTGGTACCAGAGAAGCTCACAAGGAGAATAGCTCGCGAGGTCCTGCGGCTGGCATCTTGCGAGCCCTGCGGCCTGCGCGGCTGCGTACTCTACATCCACCTTGAGCTGGACAAGGGCTGCAAGCAGCTGGAGCGCATCGTGTACGATGCCACCGTGGTGCCCACATTTGAACTGACTCTTGTTTTCAAGCAAGATGGCACCGCCTGGCCCAGCCTACGGGACTTCCTTTTTATGGGAACCTGCTTTGCCCCGACTTTCAGGCATGTACTTAAACTGAGTCCAGGTTTCCGGCTTGTCAAGAAAAAACTGTACTCCTCCTCGGCTGGTACCGTGGTAGAGGAGTGCTGAACTATGGGAGGGATTAAAGTGGGATATGGGGTTTCCTGTGGGTAAACGCACTTCTGCCCAAATGTAAGTGACACTCCAATGGTGTCATTTTCAACCGTGTTTTTGCACAATACAGTTTTGTCAATTCAACTATTGGTAGCCAGTCAGTTCAGTTTTgaacttcagatgtaaagttaaaaGCTGTTGAATAAATGACCCTTATAGTTCTGGGTTTGGCTTCAGTGTTTCgaagtgcattttttttattggcaaAATTGTACAATTCTGGATGTTTTTTCCTACTCGAAGCATTTGTTGCTCAGACACAATCTtaaattgtacattttaaagaTGAATGTAAAACTATGTTCACAATCAACATGTTTGAGGGACATACTGTGGGTACACGTTAGTTAAAGACACTAGCCACTTTGTTGATGCATCTGTGTTTCCAGATGTGTTCAGCAGCAGTAAACCTACCTGGGCTTGAATAGGAGACTGAAACGTAGTCTATGGGGGGCCATATGTAGCTTGTTGTGGAATGCTGTATTTAGGGCTGTGGATGTTTAAAGACTGAATGTCTTGGGAAGATGCTGCTGTGATGGTGTGGGCTTCTCACACTAAGGGACTTTGGATGCCTTAAATGTAATAGAAATgcacttttatttgttttcactCTGAGCgatgtgtgttttagtgtaaacgttttacatttttataccCCTCCCCCGAACACCTTTTCAATGCAGAGCCTTTGTATATTATTAAAAGGATGGTTCACTAAAATGTAAAAGCttaa

Function

symbol description
ddit4l Predicted to be involved in negative regulation of signal transduction. Predicted to be located in cytoplasm.

NR:

description
PREDICTED: DNA damage-inducible transcript 4-like protein

GO:

id name namespace
GO:0009968 negative regulation of signal transduction biological_process
GO:0005737 cytoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039823623.1 True 1541 mRNA 0.44 3 11970407 11973485
XM_039823624.1 False 1480 mRNA 0.45 3 11970407 11973487

Neighbor

gene id symbol gene type direction distance location
spag17 LOC104959999,LOC104962483 coding downstream 2635 11936610 ~ 11967772 (-)
trnag-gcc NA coding downstream 13008 11957329 ~ 11957399 (-)
LOC120573491 lrfn4,LOC103363228,LOC102311587 coding downstream 210548 11724497 ~ 11759859 (-)
trnam-cau_43 NA coding downstream 485851 11484485 ~ 11484556 (-)
snx15 snx15 coding downstream 488801 11474794 ~ 11481606 (-)
LOC120573457 LOC104966162 coding upstream 4406 11977893 ~ 11991500 (-)
LOC120572708 nfib coding upstream 158919 12132406 ~ 12198738 (-)
zdhhc21 zdhhc21 coding upstream 235085 12208572 ~ 12217427 (-)
plin2 plin2 coding upstream 317236 12290723 ~ 12294499 (-)
trnai-aau_26 NA coding upstream 437556 12411043 ~ 12411116 (-)
G142790 NA non-coding downstream 114053 11842267 ~ 11856354 (-)
G142766 LOC103363230 non-coding downstream 407475 11553786 ~ 11562932 (-)
G142758 slc3a2 non-coding downstream 430889 11490414 ~ 11539518 (-)
G142751 NA non-coding downstream 522896 11441681 ~ 11447511 (-)
LOC120573191 NA non-coding downstream 530571 11439304 ~ 11439836 (-)
LOC120573458 NA non-coding upstream 12342 11985829 ~ 11986624 (-)
G142846 NA non-coding upstream 249786 12223273 ~ 12224139 (-)
G142839 NA non-coding upstream 297348 12270835 ~ 12275611 (-)
G142868 NA non-coding upstream 308246 12281733 ~ 12287351 (-)
G142925 NA non-coding upstream 601050 12574537 ~ 12577019 (-)
LOC120573414 LOC104960590,LOC106514884,LOC103390236,LOC107084127,LOC106908847,LOC101464045,LOC100704366,LOC102310755,LOC102193047,LOC102788271,LOC103369314,LOC103129513 other downstream 34634 11910451 ~ 11935773 (-)
prox3 LOC104947722,LOC103363229 other downstream 503388 11455015 ~ 11467019 (-)
G142745 NA other downstream 526468 11441961 ~ 11443939 (-)
gpha2 gpha2 other downstream 815878 11149851 ~ 11154529 (-)
G142669 NA other downstream 825669 10930022 ~ 11144738 (-)
LOC120573137 ppp3ca,LOC103369319 other upstream 21427 11994914 ~ 12063426 (-)
G142916 NA other upstream 440267 12413754 ~ 12415155 (-)
rpl34 rpl34,LOC107566275 other upstream 625266 12598753 ~ 12602673 (-)
LOC120572742 rbpms,LOC107086924,LOC107377421 other upstream 3113378 15086865 ~ 15121956 (-)
phf23b phf23 other upstream 3723612 15697099 ~ 15702094 (-)

Expression


Co-expression Network