LOC120572409


Basic Information

Item Value
gene id LOC120572409
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 8476414 ~ 8476831 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005641442.1
TGCTAAAGAAGAACTGCATCCTGAAAGAAACAAGAATGTGGGCTCTGATGATCTGAACTCTGCAGCTCTGAGGTTCCTTCCAAACACAATAAGGAACAGGAGGCCTGATCAGAGAGAGAAGTGGAGACTCAGGTTCTTTATAGCGCCAGCAGATAGACACAAGCAGCAATAGGACTGCAACTCTCAGTGGAACTGATGCTCTATATTCATCTGCTGCCAGAGTCAATggcaacattcttttattaaataaagttcCTATACTCATGGTCa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005641442.1 True 270 lncRNA 0.43 2 8476414 8476831

Neighbor

gene id symbol gene type direction distance location
LOC120572394 NA coding upstream 28669 8445286 ~ 8447745 (+)
LOC120572377 NA coding upstream 67542 8406907 ~ 8408872 (+)
LOC120573544 NA coding upstream 105594 8368140 ~ 8370820 (+)
LOC120572387 NA coding upstream 150838 8323775 ~ 8325576 (+)
LOC120573542 NA coding upstream 161646 8305985 ~ 8314768 (+)
LOC120572388 NA coding downstream 20426 8497257 ~ 8502220 (+)
LOC120573551 NA coding downstream 93247 8570078 ~ 8571491 (+)
LOC120572362 NA coding downstream 130134 8606965 ~ 8611199 (+)
LOC120572378 NA coding downstream 155949 8632780 ~ 8636310 (+)
LOC120572371 NA coding downstream 172393 8649224 ~ 8651266 (+)
LOC120572410 NA non-coding upstream 6845 8468699 ~ 8469569 (+)
G141967 NA non-coding upstream 277239 8198847 ~ 8199175 (+)
LOC120572404 NA non-coding upstream 391094 8083438 ~ 8085320 (+)
LOC120572412 NA non-coding upstream 402424 8069786 ~ 8073990 (+)
G141943 NA non-coding upstream 414553 8061399 ~ 8061861 (+)
LOC120572403 NA non-coding downstream 176021 8652852 ~ 8689678 (+)
G142057 NA non-coding downstream 278399 8755230 ~ 8755493 (+)
G142156 NA non-coding downstream 515092 8991923 ~ 9005284 (+)
G142161 NA non-coding downstream 540167 9016998 ~ 9017210 (+)
G142203 NA non-coding downstream 720706 9197537 ~ 9203445 (+)
LOC120573548 NA other upstream 63080 8412679 ~ 8413334 (+)
LOC120573547 NA other upstream 75875 8390815 ~ 8400539 (+)
LOC120572385 NA other upstream 415936 8057655 ~ 8060478 (+)
LOC120572330 LOC107104736,LOC106920517,LOC103140598,LOC106947113 other upstream 478706 7990198 ~ 7997708 (+)
LOC120573538 NA other upstream 754758 7716604 ~ 7721656 (+)
LOC120572401 NA other downstream 137459 8614290 ~ 8616191 (+)
LOC120572381 NA other downstream 269789 8746620 ~ 8748900 (+)
tmem88b tmem88,LOC104964151,LOC103375639,LOC102237254 other downstream 2037406 10514237 ~ 10523748 (+)
LOC120573689 NA other downstream 2221453 10698284 ~ 10705325 (+)
zgc:101765 LOC104948199,LOC103360918 other downstream 2690575 11167406 ~ 11177041 (+)

Expression


Co-expression Network