LOC120572410


Basic Information

Item Value
gene id LOC120572410
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 8468699 ~ 8469569 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005641443.1
gttctcttaatggTCATCATTGGTCTGGTTGTTTCAATCACGAAACTTCAGAAAGCTGCCAATGAAGAACAGAATCCACAACAGCCTGAGAACCGGGCCTCTGAAGAGCTGAACTACGCAGCTGTGGCTTTCCGtccaaaaacaagaaaaacaagagaAGTGGAGCCCAATGTTGTGTATGCTTCTACTAGATAGACTCAGGATGAAACCAGAGAAGAGGTTCAGAATAAAACTGATGTTTTATCATATTCATCTGCAGATTGTGGACAGGAGAACTGACCATCACTTTGTCAAAAGAAGGACAAAAGATGTGCAACCTTCTTCCTAGTGCAGAGTTTGAATTTTAATCTCTTTTATAGATGTAATTAGTGTACATCAATACAGAAAGAAGATTTTGTAAATGCAGacttgacagcagtgtgtctaTGCTGGTAGGGGAATACAATTCAAGAGGTACAGCAGCAATCAGTTTTAcatttgacttaaaaaaaataaactactcttttcttttttcttttctttcactaCTTGTCTCTGTTAAACTCTGACACTGTTTCATCGGTAGTTCCACTTCCCCATCCTTGTACTTTGATTATTATCGGATCTGATTATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005641443.1 True 613 lncRNA 0.38 3 8468699 8469569

Neighbor

gene id symbol gene type direction distance location
LOC120572394 NA coding upstream 20954 8445286 ~ 8447745 (+)
LOC120572377 NA coding upstream 59827 8406907 ~ 8408872 (+)
LOC120573544 NA coding upstream 97879 8368140 ~ 8370820 (+)
LOC120572387 NA coding upstream 143123 8323775 ~ 8325576 (+)
LOC120573542 NA coding upstream 153931 8305985 ~ 8314768 (+)
LOC120572388 NA coding downstream 27688 8497257 ~ 8502220 (+)
LOC120573551 NA coding downstream 100509 8570078 ~ 8571491 (+)
LOC120572362 NA coding downstream 137396 8606965 ~ 8611199 (+)
LOC120572378 NA coding downstream 163211 8632780 ~ 8636310 (+)
LOC120572371 NA coding downstream 179655 8649224 ~ 8651266 (+)
G141967 NA non-coding upstream 269524 8198847 ~ 8199175 (+)
LOC120572404 NA non-coding upstream 383379 8083438 ~ 8085320 (+)
LOC120572412 NA non-coding upstream 394709 8069786 ~ 8073990 (+)
G141943 NA non-coding upstream 406838 8061399 ~ 8061861 (+)
G141942 NA non-coding upstream 407406 8061059 ~ 8061293 (+)
LOC120572409 NA non-coding downstream 6845 8476414 ~ 8476831 (+)
LOC120572403 NA non-coding downstream 183283 8652852 ~ 8689678 (+)
G142057 NA non-coding downstream 285661 8755230 ~ 8755493 (+)
G142156 NA non-coding downstream 522354 8991923 ~ 9005284 (+)
G142161 NA non-coding downstream 547429 9016998 ~ 9017210 (+)
LOC120573548 NA other upstream 55365 8412679 ~ 8413334 (+)
LOC120573547 NA other upstream 68160 8390815 ~ 8400539 (+)
LOC120572385 NA other upstream 408221 8057655 ~ 8060478 (+)
LOC120572330 LOC107104736,LOC106920517,LOC103140598,LOC106947113 other upstream 470991 7990198 ~ 7997708 (+)
LOC120573538 NA other upstream 747043 7716604 ~ 7721656 (+)
LOC120572401 NA other downstream 144721 8614290 ~ 8616191 (+)
LOC120572381 NA other downstream 277051 8746620 ~ 8748900 (+)
tmem88b tmem88,LOC104964151,LOC103375639,LOC102237254 other downstream 2044668 10514237 ~ 10523748 (+)
LOC120573689 NA other downstream 2228715 10698284 ~ 10705325 (+)
zgc:101765 LOC104948199,LOC103360918 other downstream 2697837 11167406 ~ 11177041 (+)

Expression


Co-expression Network