LOC120572447


Basic Information

Item Value
gene id LOC120572447
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 2294741 ~ 2295714 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005641450.1
GTTAAGTGACGATCCCAGCACTCTTCAATAGATGGCAGTAATGCAACACTTATGGATGCCAACTGCTGTTAAACCACATGAAGAAGCCTTGTTAAATGTTTCAGAGAGACGGTTGGCACCATAGACATAATAGAATCTACTTGATGTTCCTCCAGATCTGACTGATCAGATGCTGTCCTGGACACCTGTTTGATGAGGTTTACCTGGACCCACAAGACTCTCCTCACAGTATGAAGGTATTGTGGGACAGGTGCCATACTTCTGCCAAGTGATGATGGTCTGAAGACAACACAGCAGCATCAGGACAGATTCAGTATCCACAGGATGACTTCTGTGACCTGAGAGCCTACATTACCAGCTGACACATCCTCAGTAGAAAATAAACCCTTTAGTCTGGGTGAGGACATGATCTGGACTGTTATCTGCTactctgtgcattatgtatacacactttatatttacatttcattGACTATGAATAAAGTGCTTTATTTCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005641450.1 True 497 lncRNA 0.42 2 2294741 2295714

Neighbor

gene id symbol gene type direction distance location
LOC120572444 NA coding upstream 84182 2210208 ~ 2210559 (+)
LOC120572142 NA coding upstream 192369 2038970 ~ 2102372 (+)
paqr9 paqr9 coding upstream 552372 1739323 ~ 1742369 (+)
rap1gds1 rap1gds1 coding upstream 673891 1582729 ~ 1620850 (+)
spata6l NA coding upstream 750855 1522996 ~ 1543886 (+)
mad2l1 mad2l1,LOC102790739,LOC103155071,LOC106941438 coding downstream 368975 2664689 ~ 2669131 (+)
zcchc4 LOC104953644,LOC104953641 coding downstream 513186 2808900 ~ 2824015 (+)
afap1 afap1 coding downstream 660634 2956348 ~ 3108934 (+)
hacd4 hacd4 coding downstream 861080 3156794 ~ 3167756 (+)
LOC120572274 NA coding downstream 1166707 3462421 ~ 3470210 (+)
G140640 NA non-coding upstream 80579 2166236 ~ 2214162 (+)
G140635 NA non-coding upstream 139976 2154364 ~ 2154765 (+)
G140608 NA non-coding upstream 224229 2061131 ~ 2070512 (+)
G140587 NA non-coding upstream 270858 1937849 ~ 2023883 (+)
G140586 NA non-coding upstream 357093 1933298 ~ 1937648 (+)
G140650 NA non-coding downstream 39240 2334954 ~ 2335560 (+)
G140637 NA non-coding downstream 156763 2452477 ~ 2453646 (+)
G140663 LOC103388894,LOC103371184,LOC100695450 non-coding downstream 185418 2481132 ~ 2485047 (+)
G140718 NA non-coding downstream 295214 2590928 ~ 2591295 (+)
G140727 NA non-coding downstream 348234 2643948 ~ 2644430 (+)
G140613 NA other upstream 235374 2055439 ~ 2059367 (+)
G140594 NA other upstream 262516 2022592 ~ 2032225 (+)
G140582 NA other upstream 264114 1929623 ~ 2030627 (+)
frem1a frem1,LOC106908230,LOC105925506,LOC101079287,LOC108244244 other upstream 569273 1677210 ~ 1725468 (+)
LOC120572292 NA other upstream 1671706 621116 ~ 623035 (+)
ablim2 ablim2 other downstream 532338 2828052 ~ 2954690 (+)
mllt3 mllt3 other downstream 960799 3256513 ~ 3433803 (+)
zgc:112271 LOC103361642,LOC104959592,LOC100706616,LOC104935668 other downstream 2017437 4313151 ~ 4315545 (+)
G141060 men1 other downstream 2144924 4440638 ~ 4444947 (+)
G141063 NA other downstream 2187978 4483692 ~ 4487607 (+)

Expression


Co-expression Network