LOC120572729


Basic Information

Item Value
gene id LOC120572729
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 22260461 ~ 22260937 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005641481.1
agGCAACTCTGCGTCCCCCAGGCTGCAGGAACAAATTCCAAACCCCAGGACGAATCCATTTATACTGAATAAAAATACTCCTaGCTATGGAGGAGCTCAGCAACGTGGCCTGTAGCAATCAGCAAGGGGACCAGAGAAGAGGACCCAACTTTAATTTCCTGACCCACTTCCTTACAAATACTGTTGTAATGACCACTCAATCCAGGAAGTTTTATAGGATTGAAGACACATTTCTGGAGTCATATTACAAAAGTTGAAGGAATAAGGGTCACTTTTGTTTAAACTAGCTGTCTAAAGGCTGCAATGTTACAGATGTAGAGCATGGTAATAAAGTCCAGCTGATGTAATGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005641481.1 True 352 lncRNA 0.42 2 22260461 22260937

Neighbor

gene id symbol gene type direction distance location
phka1a phka1 coding downstream 60412 22164235 ~ 22200049 (-)
clcn5b clcn5 coding downstream 220896 22000595 ~ 22039565 (-)
htr2cl1 LOC101072775 coding downstream 577109 21537147 ~ 21683352 (-)
zgc:109889 LOC103480395,LOC103144648,LOC102211070,LOC101469879 coding downstream 726057 21488632 ~ 21534404 (-)
rab39bb rab39b,LOC107091979,LOC106527197 coding downstream 1076004 21167499 ~ 21184457 (-)
usp12b usp12,LOC107707922,LOC103480258,LOC103363176 coding upstream 265652 22526589 ~ 22550975 (-)
LOC120573632 NA coding upstream 309859 22570796 ~ 22573146 (-)
LOC120573633 NA coding upstream 312614 22573551 ~ 22580271 (-)
LOC120573582 NA coding upstream 320383 22581320 ~ 22605991 (-)
dachb dach2,LOC103363055,LOC103389227 coding upstream 615753 22876690 ~ 22978132 (-)
G145345 NA non-coding downstream 3183 22232334 ~ 22257278 (-)
G145343 NA non-coding downstream 29147 22231072 ~ 22231314 (-)
G145337 NA non-coding downstream 58518 22201581 ~ 22201943 (-)
G145334 NA non-coding downstream 104754 22155410 ~ 22155707 (-)
G145325 NA non-coding downstream 107375 22147578 ~ 22153086 (-)
G145395 NA non-coding upstream 203612 22464549 ~ 22471825 (-)
LOC120573387 NA non-coding upstream 346703 22607640 ~ 22608359 (-)
LOC120573226 NA non-coding upstream 484011 22744948 ~ 22746278 (-)
G145508 NA non-coding upstream 553633 22814570 ~ 22814816 (-)
G145510 NA non-coding upstream 556744 22817681 ~ 22818189 (-)
G145342 NA other downstream 29959 22230059 ~ 22230502 (-)
shroom4 shroom4,LOC107741461,LOC107562256,LOC107691917 other downstream 133980 22045501 ~ 22126481 (-)
ccnb3 ccnb3 other downstream 281035 21881290 ~ 21979426 (-)
si:dkey-172j4.3 LOC102306481,LOC103363024,LOC100708735,LOC101468909,LOC102781820,LOC101073787,LOC108246481,LOC106609052 other downstream 822005 21351242 ~ 21438456 (-)
G145509 trpc5,LOC103389248 other upstream 553969 22814906 ~ 22817623 (-)
LOC120572139 NA other upstream 1588733 23849670 ~ 23855268 (-)
LOC120572715 NA other upstream 1794063 24055000 ~ 24075036 (-)
LOC120572219 NA other upstream 1871289 24132226 ~ 24140420 (-)
LOC120573113 NA other upstream 1972704 24233641 ~ 24363065 (-)

Expression


Co-expression Network