XLOC_004841



Basic Information


Item Value
gene id XLOC_004841
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 32170468 ~ 32186567 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00010957
GACAGGTTAaaggatttgtgtggaacccaacattgtttacagtGCTGCACTGAATGCCAGAAGCAAGAGCCCACCGCTGAGCAGCAGGAGCCCCAGAATGGAGATGATGGAGCCATGGCTGTTGAAACTGTAGGCCACAGCAGTGACTGTGACACCGATGATCAGCAGAACCACAGCAAAGGGAAAAGTACAGCAAGAACACGAGTCCTCCGCTCCTCCAGTGGCTGTGCTCAGATCTGCGGCATTAGGCTTCAATGCAGGAGGATCAGAGCTCAtggttcagttcagttcactGCTGCTCTTTATTGATGATGCCGATGATGAAGAGACTGATGGTGATCATAGTA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00010957 True 347 lncRNA 0.50 2 32170468 32186567

Neighbor


gene id symbol gene type direction distance location
XLOC_004840 hlfb coding upstream 5241 32159272 ~ 32165227 (+)
XLOC_004839 stxbp4 coding upstream 24487 32073660 ~ 32145981 (+)
XLOC_004838 CR385040.2 coding upstream 100712 32020121 ~ 32069756 (+)
XLOC_004837 dre-mir-2196 coding upstream 253416 31916943 ~ 31917052 (+)
XLOC_004836 CR450698.1 coding upstream 351863 31795031 ~ 31818605 (+)
XLOC_004842 si:ch211-277e21.1 coding downstream 13084 32199651 ~ 32265169 (+)
XLOC_004843 ANKFN1 coding downstream 105997 32292564 ~ 32374156 (+)
XLOC_004844 nog3 coding downstream 202293 32388860 ~ 32390444 (+)
XLOC_004845 CT573006.2 coding downstream 215517 32402084 ~ 32416844 (+)
XLOC_004846 NA coding downstream 245047 32431614 ~ 32526346 (+)
XLOC_004830 NA non-coding upstream 539171 31608889 ~ 31631297 (+)
XLOC_004829 NA non-coding upstream 566953 31583376 ~ 31603515 (+)
XLOC_004828 NA non-coding upstream 601942 31568188 ~ 31568526 (+)
XLOC_004848 BX936416.1 non-coding downstream 765215 32951782 ~ 32951896 (+)
XLOC_004850 NA non-coding downstream 1153648 33340215 ~ 33343285 (+)
XLOC_004854 NA non-coding downstream 1409335 33595902 ~ 33606588 (+)

Expression



Co-expression Network