LOC120573191


Basic Information

Item Value
gene id LOC120573191
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 11439304 ~ 11439836 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005641657.1
GGATGAGCACATTGGAGCTGCCATTGGAGAGCTTTTTCTGTCGGGGGTGCAGTCTGATATTCTACTGTTCAACCAGGAATCACCCCGTCAGCACCAGACCGCATACCCCAGGATCAACTGGCTGAATACAATGATGCATCTGGCTCCAGTGCGCCATCCCCCGCTCAGAGCGCGGCTGGACCCTCAAGTCATTCCTACAAAATCAACAGAAGATATGAGAGACTCTTCAGCATATGTTATCAACGTTTTCAAAAATGACTGACGCtctcaaagaagaaaaaaagttaaataaacttTTTTGTAATTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005641657.1 True 308 lncRNA 0.45 2 11439304 11439836

Neighbor

gene id symbol gene type direction distance location
plcb3 plcb3 coding downstream 51507 11332356 ~ 11387797 (-)
badb NA coding downstream 256617 11175563 ~ 11182687 (-)
LOC120572301 NA coding downstream 272013 11158223 ~ 11167291 (-)
arl2 arl2 coding downstream 359231 11077474 ~ 11080073 (-)
rcor2 rcor2 coding downstream 405704 11019382 ~ 11033600 (-)
tmem179ba tmem179b coding upstream 5776 11445612 ~ 11452877 (-)
snx15 snx15 coding upstream 34958 11474794 ~ 11481606 (-)
trnal-aag_8 NA coding upstream 35426 11475262 ~ 11475343 (-)
trnal-aag_9 NA coding upstream 38281 11478117 ~ 11478198 (-)
trnam-cau_43 NA coding upstream 44649 11484485 ~ 11484556 (-)
G142744 NA non-coding downstream 5457 11409918 ~ 11433847 (-)
G142748 NA non-coding downstream 10369 11423406 ~ 11428935 (-)
G142739 NA non-coding downstream 107803 11330027 ~ 11331501 (-)
G142730 LOC104948199,LOC104959015,LOC103360918 non-coding downstream 266314 11167889 ~ 11172990 (-)
G142668 NA non-coding downstream 385598 11001436 ~ 11053706 (-)
G142751 NA non-coding upstream 1845 11441681 ~ 11447511 (-)
G142758 slc3a2 non-coding upstream 50578 11490414 ~ 11539518 (-)
G142766 LOC103363230 non-coding upstream 113950 11553786 ~ 11562932 (-)
G142790 NA non-coding upstream 402431 11842267 ~ 11856354 (-)
LOC120573458 NA non-coding upstream 545993 11985829 ~ 11986624 (-)
gpha2 gpha2 other downstream 284775 11149851 ~ 11154529 (-)
G142669 NA other downstream 294566 10930022 ~ 11144738 (-)
si:dkey-183c6.7 LOC103364800,LOC108242893,LOC102223112,LOC106525003,LOC106907808,LOC106948277,LOC103480784,LOC103131169 other downstream 781331 10631475 ~ 10657973 (-)
tmem256 tmem256,LOC103358394 other downstream 1973525 9457850 ~ 9465779 (-)
chrnb1l LOC101463714,LOC102292928,LOC102798105 other downstream 2285371 9130643 ~ 9153933 (-)
G142745 NA other upstream 2125 11441961 ~ 11443939 (-)
prox3 LOC104947722,LOC103363229 other upstream 15179 11455015 ~ 11467019 (-)
LOC120573414 LOC104960590,LOC106514884,LOC103390236,LOC107084127,LOC106908847,LOC101464045,LOC100704366,LOC102310755,LOC102193047,LOC102788271,LOC103369314,LOC103129513 other upstream 470615 11910451 ~ 11935773 (-)
LOC120573137 ppp3ca,LOC103369319 other upstream 555078 11994914 ~ 12063426 (-)
G142916 NA other upstream 973918 12413754 ~ 12415155 (-)

Expression


Co-expression Network